[us-commits] [ehb54/ultrascan3] 38b512: beta -> main

ehb54 noreply at github.com
Sat Jul 2 12:02:16 MDT 2022 

  Branch: refs/heads/master
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 38b512aedde26d98098f2eef8e85c41c710470ab
      https://github.com/ehb54/ultrascan3/commit/38b512aedde26d98098f2eef8e85c41c710470ab
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2022-07-02 (Sat, 02 Jul 2022)

  Changed paths:
    M us_somo/add_to_bin/iftci_linux64
    M us_somo/add_to_bin/iftci_osx10.8
    M us_somo/add_to_bin/iftci_win64.exe
    A us_somo/develop/include/bits_stdc++.h
    M us_somo/develop/include/us3i_color.h
    M us_somo/develop/include/us3i_editor.h
    M us_somo/develop/include/us3i_plot.h
    M us_somo/develop/include/us3i_widgets.h
    M us_somo/develop/include/us3i_widgets_dialog.h
    M us_somo/develop/include/us_hydrodyn.h
    M us_somo/develop/include/us_hydrodyn_addatom.h
    M us_somo/develop/include/us_hydrodyn_addhybrid.h
    M us_somo/develop/include/us_hydrodyn_addresidue.h
    M us_somo/develop/include/us_hydrodyn_addsaxs.h
    M us_somo/develop/include/us_hydrodyn_batch.h
    M us_somo/develop/include/us_hydrodyn_cluster_dmd.h
    M us_somo/develop/include/us_hydrodyn_misc.h
    M us_somo/develop/include/us_hydrodyn_pdbdefs.h
    M us_somo/develop/include/us_hydrodyn_sas_options_misc.h
    M us_somo/develop/include/us_hydrodyn_saxs.h
    M us_somo/develop/include/us_hydrodyn_saxs_hplc.h
    M us_somo/develop/include/us_hydrodyn_saxs_iqq_load_csv.h
    M us_somo/develop/include/us_hydrodyn_saxs_residuals.h
    M us_somo/develop/include/us_hydrodyn_supc.h
    M us_somo/develop/include/us_license.h
    M us_somo/develop/include/us_math.h
    M us_somo/develop/include/us_plot_util.h
    M us_somo/develop/include/us_pm.h
    M us_somo/develop/include/us_saxs_util.h
    M us_somo/develop/include/us_timer.h
    M us_somo/develop/include/us_util.h
    M us_somo/develop/include/us_vector.h
    M us_somo/develop/libus_somo.pro
    M us_somo/develop/src/us3i_color.cpp
    M us_somo/develop/src/us3i_editor.cpp
    M us_somo/develop/src/us3i_editor_gui.cpp
    M us_somo/develop/src/us3i_gzip.cpp
    M us_somo/develop/src/us3i_plot.cpp
    M us_somo/develop/src/us3i_widgets.cpp
    M us_somo/develop/src/us3i_widgets_dialog.cpp
    M us_somo/develop/src/us_color.cpp
    M us_somo/develop/src/us_config.cpp
    M us_somo/develop/src/us_config_gui.cpp
    M us_somo/develop/src/us_csv.cpp
    M us_somo/develop/src/us_file_util.cpp
    M us_somo/develop/src/us_gzip.cpp
    M us_somo/develop/src/us_hydrodyn.cpp
    M us_somo/develop/src/us_hydrodyn_addatom.cpp
    M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
    M us_somo/develop/src/us_hydrodyn_asab1.cpp
    M us_somo/develop/src/us_hydrodyn_batch.cpp
    M us_somo/develop/src/us_hydrodyn_beads.cpp
    M us_somo/develop/src/us_hydrodyn_beads_load.cpp
    M us_somo/develop/src/us_hydrodyn_best.cpp
    M us_somo/develop/src/us_hydrodyn_cluster.cpp
    M us_somo/develop/src/us_hydrodyn_cluster_config.cpp
    M us_somo/develop/src/us_hydrodyn_cluster_dmd.cpp
    M us_somo/develop/src/us_hydrodyn_cluster_results.cpp
    M us_somo/develop/src/us_hydrodyn_cluster_status.cpp
    M us_somo/develop/src/us_hydrodyn_cluster_submit.cpp
    M us_somo/develop/src/us_hydrodyn_comparative.cpp
    M us_somo/develop/src/us_hydrodyn_core.cpp
    M us_somo/develop/src/us_hydrodyn_grid_atob.cpp
    M us_somo/develop/src/us_hydrodyn_grpy.cpp
    M us_somo/develop/src/us_hydrodyn_hydrate.cpp
    M us_somo/develop/src/us_hydrodyn_info.cpp
    M us_somo/develop/src/us_hydrodyn_load.cpp
    M us_somo/develop/src/us_hydrodyn_misc.cpp
    M us_somo/develop/src/us_hydrodyn_other.cpp
    M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
    M us_somo/develop/src/us_hydrodyn_pdb_tool_merge.cpp
    M us_somo/develop/src/us_hydrodyn_pdb_tool_util.cpp
    M us_somo/develop/src/us_hydrodyn_sas_options_guinier.cpp
    M us_somo/develop/src/us_hydrodyn_sas_options_misc.cpp
    M us_somo/develop/src/us_hydrodyn_save.cpp
    M us_somo/develop/src/us_hydrodyn_saxs.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc_load.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer_nth.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_cormap.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_guinier.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_baseline_best.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_ciq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc_load.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_dctr.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit_global.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_scale_trend.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_svd.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_ift.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_residuals.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_residuals.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_screen.cpp
    A us_somo/develop/src/us_hydrodyn_script.cpp
    M us_somo/develop/src/us_hydrodyn_settings.cpp
    M us_somo/develop/src/us_hydrodyn_util.cpp
    M us_somo/develop/src/us_hydrodyn_write.cpp
    M us_somo/develop/src/us_pdb_util.cpp
    M us_somo/develop/src/us_plot_util.cpp
    M us_somo/develop/src/us_pm.cpp
    M us_somo/develop/src/us_pm_fitness.cpp
    M us_somo/develop/src/us_pm_test.cpp
    M us_somo/develop/src/us_saxs_util_best.cpp
    M us_somo/develop/src/us_saxs_util_dmd.cpp
    M us_somo/develop/src/us_saxs_util_extern.cpp
    A us_somo/develop/src/us_saxs_util_gui_only.cpp
    M us_somo/develop/src/us_saxs_util_hydrate.cpp
    M us_somo/develop/src/us_saxs_util_hydro.cpp
    M us_somo/develop/src/us_saxs_util_hydro_grid_atob_hydro.cpp
    M us_somo/develop/src/us_saxs_util_iqq.cpp
    M us_somo/develop/src/us_saxs_util_iqq_1d.cpp
    M us_somo/develop/src/us_saxs_util_iqq_1d_mpi.cpp
    M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
    M us_somo/develop/src/us_saxs_util_loads.cpp
    M us_somo/develop/src/us_saxs_util_mpi.cpp
    M us_somo/develop/src/us_saxs_util_nsa_ga.cpp
    M us_somo/develop/src/us_saxs_util_nsa_ga_mpi.cpp
    M us_somo/develop/src/us_saxs_util_pm.cpp
    M us_somo/develop/src/us_saxs_util_pm_mpi.cpp
    A us_somo/develop/src/us_saxs_util_ssbond.cpp
    M us_somo/develop/src/us_saxs_util_static.cpp
    M us_somo/develop/src/us_timer.cpp
    M us_somo/develop/src/us_util.cpp
    M us_somo/develop/src/us_vector.cpp
    M us_somo/develop/src/us_write_config.cpp
    M us_somo/develop/us3_config/main.cpp
    M us_somo/develop/us3_hydrodyn/main.cpp
    M us_somo/develop/us_saxs_cmds_mpi/main.cpp
    M us_somo/develop/us_saxs_cmds_t/main.cpp
    M us_somo/develop/us_saxs_cmds_t/us_saxs_cmds_t.pro
    M us_somo/etc/dmd/PRO_RNA_MOL.DMDParam
    M us_somo/etc/dmd/allatom.par
    M us_somo/etc/dmd/medutop.pro
    A us_somo/somo/demo/1ADO_noSO4.pdb
    A us_somo/somo/demo/1e8l_cnsw_1_intensity_at_experimentalQrev.dat
    A us_somo/somo/demo/1e8l_cnsw_2_intensity_at_experimentalQrev.dat
    A us_somo/somo/demo/1e8l_cnsw_3_intensity_at_experimentalQrev.dat
    A us_somo/somo/demo/1e8l_cnsw_4_intensity_at_experimentalQrev.dat
    A us_somo/somo/demo/1e8l_cnsw_5_intensity_at_experimentalQrev.dat
    A us_somo/somo/demo/2AAS.pdb
    M us_somo/somo/doc/manual/somo/saxs_ift.html
    A us_somo/somo/doc/manual/somo/somo-HPLC-SAXS_GlobalGaussianOptions.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_File_types_new.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Iq_panel1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_CSV1_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_Plotted_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_graph_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_progwindow_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLSresiduals1_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLSresiduals3_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Plotted2_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Previous_Directories_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_SAXS_Load_CSV_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Scaling_curve_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Scaling_residuals_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_best_fit_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_best_fit_progwind_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_best_fit_res1_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_best_fit_res2_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load-1E8L_WAXSiS_models.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load_plotted_1E8L_WAXSiS_models.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_multiple_IFT.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_multiple_IFT_pr_display.png
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    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_multiple_IFT_pr_norm1.png
    M us_somo/somo/doc/manual/somo/somo_saxs.html
    M us_somo/somo/doc/manual/somo/somo_saxs_hplc.html
    M us_somo/somo/doc/manual/somo/somo_saxs_load_csv.html

  Log Message:
  -----------
  beta -> main

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