[us-commits] [ehb54/ultrascan3] 90f0e7: fixed sorting issue with rmsd, add select ALL to e...

ehb54 noreply at github.com
Wed Aug 2 05:51:49 MDT 2023


  Branch: refs/heads/issue172
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 90f0e75f999a2937dbc05d4a7413494cb5abe6c1
      https://github.com/ehb54/ultrascan3/commit/90f0e75f999a2937dbc05d4a7413494cb5abe6c1
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-04-20 (Thu, 20 Apr 2023)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h

  Log Message:
  -----------
  fixed sorting issue with rmsd, add select ALL to edit profile combo


  Commit: f0619e2fca7222417c0a22f3bce4580f2ed32c2f
      https://github.com/ehb54/ultrascan3/commit/f0619e2fca7222417c0a22f3bce4580f2ed32c2f
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-04-20 (Thu, 20 Apr 2023)

  Changed paths:
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h

  Log Message:
  -----------
  add threshold, simulate button, change highlighting


  Commit: fd5a2b54f265601c6ce4f602fbd78bae25218102
      https://github.com/ehb54/ultrascan3/commit/fd5a2b54f265601c6ce4f602fbd78bae25218102
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-04-24 (Mon, 24 Apr 2023)

  Changed paths:
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h

  Log Message:
  -----------
  add threshold for hightlighting the models


  Commit: 722f48d32c851ea5fa66a92f409bae46f849c280
      https://github.com/ehb54/ultrascan3/commit/722f48d32c851ea5fa66a92f409bae46f849c280
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-04-27 (Thu, 27 Apr 2023)

  Changed paths:
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h

  Log Message:
  -----------
  query rmsd: load edit and raw data


  Commit: 762f0f89c61b62a886e499a2f06b8299ca17b980
      https://github.com/ehb54/ultrascan3/commit/762f0f89c61b62a886e499a2f06b8299ca17b980
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-04-30 (Sun, 30 Apr 2023)

  Changed paths:
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h

  Log Message:
  -----------
  add loading the noises


  Commit: dba8d8660e06389e8a631a0dc22aa820863f9ae9
      https://github.com/ehb54/ultrascan3/commit/dba8d8660e06389e8a631a0dc22aa820863f9ae9
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-03 (Wed, 03 May 2023)

  Changed paths:
    M gui/us_new_spectrum.cpp
    M gui/us_new_spectrum.h

  Log Message:
  -----------
  save the spectrum to a csv file


  Commit: 1313c267c93456cccdf63356d5aca5a6b3df0713
      https://github.com/ehb54/ultrascan3/commit/1313c267c93456cccdf63356d5aca5a6b3df0713
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-04 (Thu, 04 May 2023)

  Changed paths:
    M gui/us_new_spectrum.cpp

  Log Message:
  -----------
  add a line for the header


  Commit: 65dc5b37e636fd4c013a6a463b55006063013ac3
      https://github.com/ehb54/ultrascan3/commit/65dc5b37e636fd4c013a6a463b55006063013ac3
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-04 (Thu, 04 May 2023)

  Changed paths:
    M programs/us_spectrum/us_spectrum.cpp
    M programs/us_spectrum/us_spectrum.h

  Log Message:
  -----------
  modify load_spectra method to parse the dsp files


  Commit: eb594d2df9a699c42a9c1df249258caa83f4e8fd
      https://github.com/ehb54/ultrascan3/commit/eb594d2df9a699c42a9c1df249258caa83f4e8fd
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-04 (Thu, 04 May 2023)

  Changed paths:
    M programs/us/us.cpp
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
    M programs/us_xpn_viewer/us_xpn_viewer_gui.h
    M utils/us_astfem_math.cpp

  Log Message:
  -----------
  Merge remote-tracking branch 'upstream/master'


  Commit: 722def8397b98aec8909e274d058e2b96257aa3d
      https://github.com/ehb54/ultrascan3/commit/722def8397b98aec8909e274d058e2b96257aa3d
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-08 (Mon, 08 May 2023)

  Changed paths:
    M gui/us_extinction_gui.cpp

  Log Message:
  -----------
  read dsp files from us_extiction_gui program


  Commit: 3b9b06f2f8016f3239c0c3430a172dfb040502ae
      https://github.com/ehb54/ultrascan3/commit/3b9b06f2f8016f3239c0c3430a172dfb040502ae
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-10 (Wed, 10 May 2023)

  Changed paths:
    M programs/us_convert/us_convert_gui.cpp

  Log Message:
  -----------
  GMP | 3. IMPORT -- few bugs fixed related to marking triples/cells/channels as excluded (when dropping) && when dealing with reference channel's triple, or when no data will be left...


  Commit: 80bf68bc3557645d388967d99252e6d5d20b3582
      https://github.com/ehb54/ultrascan3/commit/80bf68bc3557645d388967d99252e6d5d20b3582
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-10 (Wed, 10 May 2023)

  Changed paths:
    M programs/us_convert/us_convert_gui.cpp
    M programs/us_convert/us_convert_gui.h

  Log Message:
  -----------
  GMP | 3. IMPORT -- pick up the comments for dropping operations & save to DB for different (or all) cases: (1) triple(s) dropped; (2) channels dropped; (3) selected channel dropped...


  Commit: 99f214397b8102fd3ca2c34bd3ea53ce16f77c1e
      https://github.com/ehb54/ultrascan3/commit/99f214397b8102fd3ca2c34bd3ea53ce16f77c1e
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-10 (Wed, 10 May 2023)

  Changed paths:
    M programs/us_convert/us_convert_gui.cpp

  Log Message:
  -----------
  GMP | 3. IMPORT -- nested (instead of linear) JSON portion of the dropped-triples-related operaitons, for easier and more consistent later retrieval in GMP report...


  Commit: c763e110aada213673c507f765ab892179aee143
      https://github.com/ehb54/ultrascan3/commit/c763e110aada213673c507f765ab892179aee143
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-10 (Wed, 10 May 2023)

  Changed paths:
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  GMP | 3. IMPORT -- pick up & print in the GMP report's User Interactions an information on the  dropped-triples-related operaitons ...


  Commit: 639d3e7c5367dc505cb8312f0e8c9b73a86bea31
      https://github.com/ehb54/ultrascan3/commit/639d3e7c5367dc505cb8312f0e8c9b73a86bea31
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M gui/us_buffer_gui.cpp

  Log Message:
  -----------
  us_buffer_gui.cpp - Gary's fix for manual buffer flag


  Commit: e6a5fc7625337c4fac3b4ec8a826b776ef0716fa
      https://github.com/ehb54/ultrascan3/commit/e6a5fc7625337c4fac3b4ec8a826b776ef0716fa
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M gui/us_extinction_gui.cpp
    M gui/us_new_spectrum.cpp
    M programs/us_spectrum/us_spectrum.h

  Log Message:
  -----------
  fixed indentation


  Commit: 575169aad8793ec44a446debd12baf9472e5e544
      https://github.com/ehb54/ultrascan3/commit/575169aad8793ec44a446debd12baf9472e5e544
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M gui/us_buffer_gui.cpp
    M programs/us_convert/us_convert_gui.cpp
    M programs/us_convert/us_convert_gui.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  Merge remote-tracking branch 'upstream/master'


  Commit: a6d8ed7d6fdc45515cad156c83d88f5521b418bd
      https://github.com/ehb54/ultrascan3/commit/a6d8ed7d6fdc45515cad156c83d88f5521b418bd
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_autoflow_analysis/us_autoflow_analysis.h

  Log Message:
  -----------
  GMP | 5. ANALYSIS -- for each cancel event (click 'Delete' for a given triple), user has to leave a comment on the canceling reason; this per-canceling comments are captured in DB for a global autoflow run;...


  Commit: d9bdf26e7e04e7476fc85701f018bc594b30c064
      https://github.com/ehb54/ultrascan3/commit/d9bdf26e7e04e7476fc85701f018bc594b30c064
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp

  Log Message:
  -----------
  GMP  -- cosmetic fix for a message on Optima(s) being disconnected...


  Commit: 0e18848d348268751e06a7b2264eef76fd10fbf9
      https://github.com/ehb54/ultrascan3/commit/0e18848d348268751e06a7b2264eef76fd10fbf9
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-11 (Thu, 11 May 2023)

  Changed paths:
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP | 6. REPORT -- [capture & present in the User Input section on ] for each cancel event (click 'Delete' for a given triple), user has to leave a comment on the canceling reason; this per-canceling comments are captured in DB for a global autoflow run;...


  Commit: 63bbd78459811e000efe6ebc5f0ece014b2efb8c
      https://github.com/ehb54/ultrascan3/commit/63bbd78459811e000efe6ebc5f0ece014b2efb8c
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-05-12 (Fri, 12 May 2023)

  Changed paths:
    M gui/us_extinction_gui.cpp
    M gui/us_new_spectrum.cpp
    M gui/us_new_spectrum.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h
    M programs/us_spectrum/us_spectrum.cpp
    M programs/us_spectrum/us_spectrum.h

  Log Message:
  -----------
  Merge pull request #67 from samo38/master

parse dsp file & save spectrum to csv


  Commit: 2eea79932f181efa23927e6c054dcc1eb603d7bd
      https://github.com/ehb54/ultrascan3/commit/2eea79932f181efa23927e6c054dcc1eb603d7bd
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-12 (Fri, 12 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_com_project/us_com_project_gui.h
    M programs/us_experiment/us_exp_utils.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h

  Log Message:
  -----------
  GMP | RUN MAnager | 1. EXP.  -- For UL<3 (non-admins) the following scenario: (1) check if the user is set as an operator, per-Opima basis; if yes to any, set eligible Optimas; (2) if eligible Optima(s) exist, re-initialize Lab/Rotor panel, exclude no-permit machines from list; cut operators to only current UL<3 user logged in; (3) if no eligible Optimas, stop at 1. General; inform user of no-permit situation; reset to the Run MAnager; also, if no runs in Run Manager's list for UL<3 (non-admin can re-attach to its own runs), show standard message re-directing to creating a new rpotocol ...


  Commit: 44cbf4c7872f2014d8014ece5a829c44d2b8b4f8
      https://github.com/ehb54/ultrascan3/commit/44cbf4c7872f2014d8014ece5a829c44d2b8b4f8
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-13 (Sat, 13 May 2023)

  Changed paths:
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_convert/us_convert_gui.cpp
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h
    M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp

  Log Message:
  -----------
  GMP | 2. LIVE_UPD. | 4. EDIT -- add user comments for events: (1) SKIP stage at live_update; (2) manual editing of meniscus at Edit; && add to DB...


  Commit: 3aec4c88f753ec1b68a76d36cb39733f9622f515
      https://github.com/ehb54/ultrascan3/commit/3aec4c88f753ec1b68a76d36cb39733f9622f515
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-13 (Sat, 13 May 2023)

  Changed paths:
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  GMP | 5. REPORT -- slight mods to the User Input:ANALSYS section representation in GMP report ...


  Commit: 7d2d2065f4706b5d6cc4ad90c68bdc7fafef1c1d
      https://github.com/ehb54/ultrascan3/commit/7d2d2065f4706b5d6cc4ad90c68bdc7fafef1c1d
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-14 (Sun, 14 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project.pro
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_com_project/us_com_project_gui.h
    M programs/us_com_project_academic/us_com_project_academic.pro
    A programs/us_esigner_gmp/us_esigner_gmp.cpp
    A programs/us_esigner_gmp/us_esigner_gmp.h
    A programs/us_esigner_gmp/us_esigner_gmp.pro
    A programs/us_esigner_gmp/us_esigner_gmp_main.cpp

  Log Message:
  -----------
  GMP | e-Signatures & E-Sign stand-alone -- basis for e-Signature stage in GMP based on stand-alone eSignGMP program...


  Commit: e1a2a2aba20c4860989aa1a322321d2ace2e57ea
      https://github.com/ehb54/ultrascan3/commit/e1a2a2aba20c4860989aa1a322321d2ace2e57ea
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-16 (Tue, 16 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_com_project/us_com_project_gui.h

  Log Message:
  -----------
  GMP | Run Manager -- for the runs reaching the new e-Signature stage, display them only to reviwers/operator set elsewhere...


  Commit: 40985aad1174f87c4db25399655e87de99afb012
      https://github.com/ehb54/ultrascan3/commit/40985aad1174f87c4db25399655e87de99afb012
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-16 (Tue, 16 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_experiment/us_experiment.pro
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h
    M programs/us_protocol_dev/us_protocol_dev.pro
    M programs/us_protocol_dev/us_protocol_dev_gui.h

  Log Message:
  -----------
  GMP | 1. EXP. | eSigner -- further dev. for eSigning...


  Commit: 008566e174f0f90b9702cc91d55760ce2cd51cc1
      https://github.com/ehb54/ultrascan3/commit/008566e174f0f90b9702cc91d55760ce2cd51cc1
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-16 (Tue, 16 May 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP. | eSigner -- disable (for now) setting reviwers at the end of 1. EXP...


  Commit: bed758da12d318a5514b0e89a8b5d20c1d51cdea
      https://github.com/ehb54/ultrascan3/commit/bed758da12d318a5514b0e89a8b5d20c1d51cdea
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-17 (Wed, 17 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | Manage Run -- some changes to structuring oper./reviewers; development of the gui for eSigner program...


  Commit: 2f137ace56eefcb5c8b3641c742de21f4eb8bdfc
      https://github.com/ehb54/ultrascan3/commit/2f137ace56eefcb5c8b3641c742de21f4eb8bdfc
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-17 (Wed, 17 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- basic layouts for different admin & e-signers operations...


  Commit: 059ee43c3880055d35ff1c5206764fb35405b093
      https://github.com/ehb54/ultrascan3/commit/059ee43c3880055d35ff1c5206764fb35405b093
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-18 (Thu, 18 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further dev....


  Commit: dc6f80eeff3d356273ac4481f7c483b7b874f706
      https://github.com/ehb54/ultrascan3/commit/dc6f80eeff3d356273ac4481f7c483b7b874f706
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-18 (Thu, 18 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further dev [1]....ush


  Commit: d0ebef50fbea1f9d2b8737cd9d9a0c9d9bf202f5
      https://github.com/ehb54/ultrascan3/commit/d0ebef50fbea1f9d2b8737cd9d9a0c9d9bf202f5
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-19 (Fri, 19 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_esigner_gmp/us_esigner_gmp.pro
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further development & integration into GMP framework....


  Commit: 14f42b7174cb7ab1fb1aae3d1028b87809d84755
      https://github.com/ehb54/ultrascan3/commit/14f42b7174cb7ab1fb1aae3d1028b87809d84755
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-21 (Sun, 21 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further development & integration into GMP framework [1]....


  Commit: a779bfda868295dde2b79ba966637bd7ad323b73
      https://github.com/ehb54/ultrascan3/commit/a779bfda868295dde2b79ba966637bd7ad323b73
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-21 (Sun, 21 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP -- in-line notes on further dev...


  Commit: 084f35d4bc1a72862d790b438febe101fb042ba0
      https://github.com/ehb54/ultrascan3/commit/084f35d4bc1a72862d790b438febe101fb042ba0
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-23 (Tue, 23 May 2023)

  Changed paths:
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h

  Log Message:
  -----------
  GMP | 4. Edit: Manual channel edit -- when atomated meniscus position determonation fails, user clicks 'Edit Selected Cahnnel Manually'; this internal GUI is modified to only deal manually with the passed data for selected channel int he main GUI; i case of MWL, only (single) representative triple is treated && when changes accepted they are propagated to the rest of triples in the channel; Saving of all edited profiles occurs only in the main GUI of 4. EDIT...


  Commit: ca09d3069b6228e42cf57259b8799d705e2ae368
      https://github.com/ehb54/ultrascan3/commit/ca09d3069b6228e42cf57259b8799d705e2ae368
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-23 (Tue, 23 May 2023)

  Changed paths:
    M programs/us_convert/us_get_run.cpp
    M programs/us_convert/us_get_run.h

  Log Message:
  -----------
  US_Convert -- at the run data deletion, check if it's part of the GMP framework...


  Commit: c888250ebd38bf8b54d320a2a8b58b0683710b6a
      https://github.com/ehb54/ultrascan3/commit/c888250ebd38bf8b54d320a2a8b58b0683710b6a
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-23 (Tue, 23 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further development & integration into GMP framework: assigning oper(s) aand reviwer(s) from globally set reviewers & machine operators for uploaded GMP run; tested stored procs for the first time e-Signature record creation....


  Commit: fbe92060ff75e9d8c0e6395909586b9b32a4e7ca
      https://github.com/ehb54/ultrascan3/commit/fbe92060ff75e9d8c0e6395909586b9b32a4e7ca
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-24 (Wed, 24 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP Report e-Signer -- further development & integration into GMP framework: when eSigning record exists for GMP run, admin can update operator(s) and/or reviewer(s) lists, and the log event is appended to generalized log json....


  Commit: 0d2cfe75fb6de89081f8dcbb56a4cf66fb026c41
      https://github.com/ehb54/ultrascan3/commit/0d2cfe75fb6de89081f8dcbb56a4cf66fb026c41
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-24 (Wed, 24 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp

  Log Message:
  -----------
  [small bug fix for ] GMP Report e-Signer -- further development & integration into GMP framework: when eSigning record exists for GMP run, admin can update operator(s) and/or reviewer(s) lists, and the log event is appended to generalized log json....


  Commit: 7974cb47a940cc9392d80fdb51309e02ea1da71f
      https://github.com/ehb54/ultrascan3/commit/7974cb47a940cc9392d80fdb51309e02ea1da71f
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-30 (Tue, 30 May 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | R&D -- proposed fix for ticket #178; needs testing (as per #178)....


  Commit: f37cceb173d78ca9c6c384428e3a918d8565a4b5
      https://github.com/ehb54/ultrascan3/commit/f37cceb173d78ca9c6c384428e3a918d8565a4b5
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-30 (Tue, 30 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  GMP | eSigner -- further development of e-Signature stage; in-line notes on how to conclude 6. REPORT stage; ...


  Commit: e9f5c977f01365fa1ecf784cccd488a27852908b
      https://github.com/ehb54/ultrascan3/commit/e9f5c977f01365fa1ecf784cccd488a27852908b
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-30 (Tue, 30 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | eSigner -- few bugs fixed; test case created for loading GMP reports with assigned operator(s) && reviewer(s)...


  Commit: afdefb7759ab1410a26f11574edc15312fe865f9
      https://github.com/ehb54/ultrascan3/commit/afdefb7759ab1410a26f11574edc15312fe865f9
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-31 (Wed, 31 May 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | eSigner -- implemented && use test cases to try asynchronous GMP report e-signing; push/append json as reviewer or reviewers add signatures; so far in Db...


  Commit: 571bcf10e7e018c9726a3d94cc696ba4d383ef48
      https://github.com/ehb54/ultrascan3/commit/571bcf10e7e018c9726a3d94cc696ba4d383ef48
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-05-31 (Wed, 31 May 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  GMP | eSigner -- [for -- ] implemented && use test cases to try asynchronous GMP report e-signing; push/append json as reviewer or reviewers add signatures; [Now writes .PDF of a page containing e-Signatures in the same dir of the downloaded .tar of the GMP Report; there are options of when/how to append to original GMP report, OR do we need to do this at all - we can keep eSignatures .PDF in a separate & existing  table dedicated to e-signing dynamics]...


  Commit: e818763c9c5230d9b93e2a4420d0d4d2da4715d7
      https://github.com/ehb54/ultrascan3/commit/e818763c9c5230d9b93e2a4420d0d4d2da4715d7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-01 (Thu, 01 Jun 2023)

  Changed paths:
    M gui/us_analyte_gui.cpp
    M gui/us_buffer_gui.cpp
    M gui/us_solution_gui.cpp

  Log Message:
  -----------
  [Buffer, Analytes, Solutions -- ] preclude changing names in any existing records...


  Commit: ab8ac97ec39131c6b9ffa225d9cadad7e3005202
      https://github.com/ehb54/ultrascan3/commit/ab8ac97ec39131c6b9ffa225d9cadad7e3005202
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-01 (Thu, 01 Jun 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP:2.Lab/Rotor -- hide operator settings in us_experiment as operator(s) are now set up in the eSigner together with reviewer(s)...


  Commit: 982611577aa3eb9554630d9566c1eee946bb6043
      https://github.com/ehb54/ultrascan3/commit/982611577aa3eb9554630d9566c1eee946bb6043
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-02 (Fri, 02 Jun 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | eSigner -- lot's of updates: (1) check eSigning sttaus upon GMP report upload; if partially esigned, or completed, upload .PDF page with e-Signatures from DB for review, together with primary report; (2) eSign && update .PDF with e-Signatures && and upload back to Db; automatically track changed global status of eSigning; (3) lock e-Signing to one operator/reviewer at a time; for now, it's asynchronous signing, but can be ordered of needed;...


  Commit: 29a76dde1ab33ad833b621ec41a76aa0c07e013f
      https://github.com/ehb54/ultrascan3/commit/29a76dde1ab33ad833b621ec41a76aa0c07e013f
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-09 (Fri, 09 Jun 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp

  Log Message:
  -----------
  US_eSigner -- filter investigators by UL: only UL=>2 can become global reviewers...


  Commit: c34432f5a49690cbf818b210c6c814026b2f9f2d
      https://github.com/ehb54/ultrascan3/commit/c34432f5a49690cbf818b210c6c814026b2f9f2d
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-27 (Tue, 27 Jun 2023)

  Changed paths:
    M programs/us_experiment/us_exp_utils.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h
    M utils/us_run_protocol.h

  Log Message:
  -----------
  GMP | 1. EXP -- integrated settings for assigned operator(s) && reviewer(s) into 2. Lab/Rotor; part of the protocol's internals but NOT the protocol written to DB; accessible upon GMP run submission & creation eSigs DB record; ONLY for GMP-UltraScan, not R&D...


  Commit: c16a72161aff6833cba9dba891bef8ba7adc2a2d
      https://github.com/ehb54/ultrascan3/commit/c16a72161aff6833cba9dba891bef8ba7adc2a2d
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-27 (Tue, 27 Jun 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- create autoflowGMPRecordEsign record at the time of submitting GMP run in 1. EXP (new record scenario from us_esigner)...


  Commit: 1c23b6a4df7f25e022b5c89e06fa34bc1398895b
      https://github.com/ehb54/ultrascan3/commit/1c23b6a4df7f25e022b5c89e06fa34bc1398895b
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-28 (Wed, 28 Jun 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- bug fixed: if protocol already saved, do not attempt to re-save, proceed with submission; check if operators & reviewers set upon submission, preclude to submit if not...


  Commit: 4b2a0b055f383c5d15d170794739af312382f542
      https://github.com/ehb54/ultrascan3/commit/4b2a0b055f383c5d15d170794739af312382f542
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-28 (Wed, 28 Jun 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- [small bug fixed for -- ] bug fixed: if protocol already saved, do not attempt to re-save, proceed with submission; check if operators & reviewers set upon submission, preclude to submit if not...


  Commit: e090f929758dbd44ba86f0629e2e0a8caec215e4
      https://github.com/ehb54/ultrascan3/commit/e090f929758dbd44ba86f0629e2e0a8caec215e4
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-28 (Wed, 28 Jun 2023)

  Changed paths:
    M gui/us_passwd.cpp
    M gui/us_passwd.h
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h

  Log Message:
  -----------
  GMP | 1. EXP -- generalized form asking for comment & master password; can be used anywhere in the framework whenever user interactions must be audited & password required; currently used at the time of GMP run submission; needs testing...


  Commit: d230b9b954d6f0af750557fc15362133f93b163c
      https://github.com/ehb54/ultrascan3/commit/d230b9b954d6f0af750557fc15362133f93b163c
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-06-29 (Thu, 29 Jun 2023)

  Changed paths:
    M gui/us_passwd.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- [small bug fixed for -- ] generalized form asking for comment & master password; can be used anywhere in the framework whenever user interactions must be audited & password required; currently used at the time of GMP run submission; needs testing...


  Commit: 7da63bbba22ec949f62885df0db238de38f2187f
      https://github.com/ehb54/ultrascan3/commit/7da63bbba22ec949f62885df0db238de38f2187f
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-06-29 (Thu, 29 Jun 2023)

  Changed paths:
    M README.md

  Log Message:
  -----------
  Update README.md


  Commit: 9b24884c0413b751ce8b334119ad3339ac1e34ec
      https://github.com/ehb54/ultrascan3/commit/9b24884c0413b751ce8b334119ad3339ac1e34ec
  Author: samo38 <saeed.mortezazadeh25 at gmail.com>
  Date:   2023-07-03 (Mon, 03 Jul 2023)

  Changed paths:
    M programs/us_pseudo_absorbance/us_add_refScan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.h

  Log Message:
  -----------
  add methods to compute the absorbance profile by blanking the sample with buffer channel


  Commit: a1d3197aeb4634991adf89fc47cd48a473e25a2b
      https://github.com/ehb54/ultrascan3/commit/a1d3197aeb4634991adf89fc47cd48a473e25a2b
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-07-04 (Tue, 04 Jul 2023)

  Changed paths:
    M programs/us_pseudo_absorbance/us_add_refScan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.h

  Log Message:
  -----------
  Merge pull request #70 from samo38/master

add methods to compute the absorbance profile by blanking the sample with buffer channel


  Commit: 8bd714f7a34b460eeaafa498d8ea84fd9d61644c
      https://github.com/ehb54/ultrascan3/commit/8bd714f7a34b460eeaafa498d8ea84fd9d61644c
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-04 (Tue, 04 Jul 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- proper logic for distinguishing between R&D and GMP while requiring reviwers prior to submission...


  Commit: e48f4816a25b14a21742ee43fb70a428bab1c250
      https://github.com/ehb54/ultrascan3/commit/e48f4816a25b14a21742ee43fb70a428bab1c250
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-05 (Wed, 05 Jul 2023)

  Changed paths:
    M gui/us_passwd.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- display password field in the submitter's form hidden...


  Commit: e36ee892b6bd567cc967eec0a72d22a3c0c00d8f
      https://github.com/ehb54/ultrascan3/commit/e36ee892b6bd567cc967eec0a72d22a3c0c00d8f
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-07-10 (Mon, 10 Jul 2023)

  Changed paths:
    M us_somo/develop/src/us_hydrodyn_save.cpp

  Log Message:
  -----------
  Update us_hydrodyn_save.cpp

Spelling fix. https://github.com/ehb54/ultrascan-tickets/issues/188


  Commit: 16d90afd440036193a8295707a0f110dbf3a2a97
      https://github.com/ehb54/ultrascan3/commit/16d90afd440036193a8295707a0f110dbf3a2a97
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-24 (Mon, 24 Jul 2023)

  Changed paths:
    M gui/us_passwd.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- keep track on who created GMP run by clicking 'Submit' in 1. EXP. stage...


  Commit: 72d66ea16439c8d7de04d134819b6c784fe50860
      https://github.com/ehb54/ultrascan3/commit/72d66ea16439c8d7de04d134819b6c784fe50860
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-24 (Mon, 24 Jul 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP -- started to work on modified GUI for e-Signs autoflow stage; show current state of e-sign per reviwer basis...


  Commit: 7e552222da8541c8711234cbf7289927c680c5c1
      https://github.com/ehb54/ultrascan3/commit/7e552222da8541c8711234cbf7289927c680c5c1
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-25 (Tue, 25 Jul 2023)

  Changed paths:
    M gui/us_report_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | e-Signatures -- main functionalities of the alternate us_signatures constructor for use in the autoflow framework completed...


  Commit: 3e98132e70bf31d6714e924edf0ca924a4534aec
      https://github.com/ehb54/ultrascan3/commit/3e98132e70bf31d6714e924edf0ca924a4534aec
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-26 (Wed, 26 Jul 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h

  Log Message:
  -----------
  GMP | e-Signatures -- easier GUI generation for [in order] operator(s), reviwers, approver(s) in a new e-Sigs constructor...


  Commit: 6288fe510588ec32a065bc789916f52819c73f27
      https://github.com/ehb54/ultrascan3/commit/6288fe510588ec32a065bc789916f52819c73f27
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-26 (Wed, 26 Jul 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_com_project/us_com_project_gui.h
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP | e-Signatures -- Switch from 6. REPORT to e-Signatures stage | re-attachment directly form GMP Run Manager; needs testing; some logic questions/losse ends remain - TO DISCUSS...


  Commit: 6dbc67d3fba6ef9d0fd13919b03ca62de5e522d1
      https://github.com/ehb54/ultrascan3/commit/6dbc67d3fba6ef9d0fd13919b03ca62de5e522d1
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-26 (Wed, 26 Jul 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp

  Log Message:
  -----------
  GMP | eSigns -- forgot to remove test case hard coded in the alternate us_esigs constr. for autolfow framework...


  Commit: 773b6ec12990b09b1c0ab0ab514071a8d148dea7
      https://github.com/ehb54/ultrascan3/commit/773b6ec12990b09b1c0ab0ab514071a8d148dea7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-26 (Wed, 26 Jul 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp

  Log Message:
  -----------
  GMP | test commit from diff. machine


  Commit: badb287acdf0b68d6ebb0a383c37e7d04d0d2462
      https://github.com/ehb54/ultrascan3/commit/badb287acdf0b68d6ebb0a383c37e7d04d0d2462
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-27 (Thu, 27 Jul 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_experiment/us_exp_utils.cpp
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h
    M utils/us_run_protocol.h

  Log Message:
  -----------
  GMP | 1. EXP. | eSigns -- update for autolfow framework && standalone eSigner for inclusion of 'Approver' type into the consideration...


  Commit: 625e437d48aa1a119fb335d06207d9bd4e61502e
      https://github.com/ehb54/ultrascan3/commit/625e437d48aa1a119fb335d06207d9bd4e61502e
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-07-30 (Sun, 30 Jul 2023)

  Changed paths:
    M us_somo/develop/include/us_hydrodyn_addresidue.h
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/etc/somo.atom.new
    M us_somo/etc/somo.hybrid.new
    M us_somo/etc/somo.residue.new

  Log Message:
  -----------
  updated somo.residue; updates to residue editor


  Commit: f39acb67b0e54feb01031bdb55536e899f98ed05
      https://github.com/ehb54/ultrascan3/commit/f39acb67b0e54feb01031bdb55536e899f98ed05
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-07-30 (Sun, 30 Jul 2023)

  Changed paths:
    M us_somo/develop/src/us_hydrodyn_load.cpp

  Log Message:
  -----------
  src/us_hydrodyn_load.cpp - drop & warn on empty PDB MODEL section


  Commit: cd7efc7854dfa9452c28b50f1007a31a5587b6ce
      https://github.com/ehb54/ultrascan3/commit/cd7efc7854dfa9452c28b50f1007a31a5587b6ce
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-30 (Sun, 30 Jul 2023)

  Changed paths:
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | 1. EXP. | eSigns -- some bugs fixed for the first time GMP run record written...


  Commit: 8a250037c8ddcf1c7d4659dc4496d2faca331d6d
      https://github.com/ehb54/ultrascan3/commit/8a250037c8ddcf1c7d4659dc4496d2faca331d6d
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-07-30 (Sun, 30 Jul 2023)

  Changed paths:
    M us_somo/develop/include/us_hydrodyn_addresidue.h
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/develop/src/us_hydrodyn_load.cpp
    M us_somo/etc/somo.atom.new
    M us_somo/etc/somo.hybrid.new
    M us_somo/etc/somo.residue.new

  Log Message:
  -----------
  Merge pull request #71 from ehb54/somo_fixes_20230730

updated somo.residue; updates to residue editor


  Commit: 70abe44bd4c346a26af313ece24620b0d8927bd0
      https://github.com/ehb54/ultrascan3/commit/70abe44bd4c346a26af313ece24620b0d8927bd0
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-31 (Mon, 31 Jul 2023)

  Changed paths:
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_esigner_gmp/us_esigner_gmp_main.cpp
    A programs/us_esigner_gmp_aux/us_esigner_gmp.pro
    A programs/us_esigner_gmp_aux/us_esigner_gmp_main.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp

  Log Message:
  -----------
  GMP | eSigns -- desicion made on e-Signing process would be decoupled from autoflow framework, for ease of controlling GMP runs with assigned reviwers vs. logged in users; old (aux.) features retained in a new separate program 'us_esigner_aux'; remove eSignature tab from us_Comproject...


  Commit: db0fab2232a622c7e5e23104c0e9a4812d95b397
      https://github.com/ehb54/ultrascan3/commit/db0fab2232a622c7e5e23104c0e9a4812d95b397
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-07-31 (Mon, 31 Jul 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp

  Log Message:
  -----------
  GMP | eSigns -- enforce ordered e-signing, as defined in to_sign json key...


  Commit: 39107dc9f302400aa1e462189f01f45e40d9037d
      https://github.com/ehb54/ultrascan3/commit/39107dc9f302400aa1e462189f01f45e40d9037d
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-08-01 (Tue, 01 Aug 2023)

  Changed paths:
    M gui/us_passwd.cpp
    M gui/us_passwd.h
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_esigner_gmp/us_esigner_gmp.h
    M programs/us_experiment/us_experiment_gui_optima.cpp

  Log Message:
  -----------
  GMP | eSigns -- slight GUI changes; enforce for checking master passw. & comment prior to e-Signing...


  Commit: 729a447245734bb0bb05a4d857920db8504c5ca0
      https://github.com/ehb54/ultrascan3/commit/729a447245734bb0bb05a4d857920db8504c5ca0
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2023-08-01 (Tue, 01 Aug 2023)

  Changed paths:
    M programs/us_esigner_gmp/us_esigner_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP | REPORT -- new way of generating .PDF for GMP report ('painting') to enable custom page pagination: footers to be passed by e-Signers...


  Commit: 1a2a7c0d577cbec6b971b16c6e150c300167f4cd
      https://github.com/ehb54/ultrascan3/commit/1a2a7c0d577cbec6b971b16c6e150c300167f4cd
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-08-02 (Wed, 02 Aug 2023)

  Changed paths:
    M README.md
    M gui/us_analyte_gui.cpp
    M gui/us_buffer_gui.cpp
    M gui/us_extinction_gui.cpp
    M gui/us_new_spectrum.cpp
    M gui/us_new_spectrum.h
    M gui/us_passwd.cpp
    M gui/us_passwd.h
    M gui/us_report_gui.cpp
    M gui/us_solution_gui.cpp
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_autoflow_analysis/us_autoflow_analysis.h
    M programs/us_com_project/us_com_project.pro
    M programs/us_com_project/us_com_project_gui.cpp
    M programs/us_com_project/us_com_project_gui.h
    M programs/us_com_project_academic/us_com_project_academic.pro
    M programs/us_convert/us_convert_gui.cpp
    M programs/us_convert/us_convert_gui.h
    M programs/us_convert/us_get_run.cpp
    M programs/us_convert/us_get_run.h
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h
    A programs/us_esigner_gmp/us_esigner_gmp.cpp
    A programs/us_esigner_gmp/us_esigner_gmp.h
    A programs/us_esigner_gmp/us_esigner_gmp.pro
    A programs/us_esigner_gmp/us_esigner_gmp_main.cpp
    A programs/us_esigner_gmp_aux/us_esigner_gmp.pro
    A programs/us_esigner_gmp_aux/us_esigner_gmp_main.cpp
    M programs/us_experiment/us_exp_utils.cpp
    M programs/us_experiment/us_experiment.pro
    M programs/us_experiment/us_experiment_gui_optima.cpp
    M programs/us_experiment/us_experiment_gui_optima.h
    M programs/us_protocol_dev/us_protocol_dev.pro
    M programs/us_protocol_dev/us_protocol_dev_gui.h
    M programs/us_pseudo_absorbance/us_add_refScan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.cpp
    M programs/us_pseudo_absorbance/us_convert_scan.h
    M programs/us_query_rmsd/us_query_rmsd.cpp
    M programs/us_query_rmsd/us_query_rmsd.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h
    M programs/us_spectrum/us_spectrum.cpp
    M programs/us_spectrum/us_spectrum.h
    M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
    M us_somo/develop/include/us_hydrodyn_addresidue.h
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/develop/src/us_hydrodyn_load.cpp
    M us_somo/develop/src/us_hydrodyn_save.cpp
    M us_somo/etc/somo.atom.new
    M us_somo/etc/somo.hybrid.new
    M us_somo/etc/somo.residue.new
    M utils/us_run_protocol.h

  Log Message:
  -----------
  Merge pull request #72 from ehb54/master

Merge master to issue172 branch


Compare: https://github.com/ehb54/ultrascan3/compare/8632559b3543...1a2a7c0d577c


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