[us-commits] [ehb54/ultrascan3] 6df6e3: *beta* somo doc etc updates

ehb54 noreply at github.com
Sun Mar 12 13:26:00 MDT 2023 

  Branch: refs/heads/master
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 6df6e34a8a5b0938a3d2fbb009c926a353f9d8e9
      https://github.com/ehb54/ultrascan3/commit/6df6e34a8a5b0938a3d2fbb009c926a353f9d8e9
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-03-09 (Thu, 09 Mar 2023)

  Changed paths:
    M us_somo/etc/somo.config.new
    M us_somo/etc/somo.defaults.new
    M us_somo/etc/somo.saxs_atoms.new
    A us_somo/somo/doc/manual/somo/Rg_from_Pr.png
    A us_somo/somo/doc/manual/somo/somo-SAS_Miscellaneous_Options_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_CSV1_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_CSV1_new3.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_Plotted_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_Plotted_new2.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new2.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new3.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_graph_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_percent_diff.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_res_div_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_res_only.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_results_with_contributing.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_percent_diff.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_res_div_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_res_only.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_results_with_contributing.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_progwindow_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_new.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_panel_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_progress_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_SAXS_Load_CSV_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_SAXS_Load_CSV_new2.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Scaling_residuals_new.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load-1E8L_WAXSiS_models.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load_plotted_1E8L_WAXSiS_models1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_new1.png
    A us_somo/somo/doc/manual/somo/somo-advanced_conf_new.png
    A us_somo/somo/doc/manual/somo/somo-misc1New.png
    M us_somo/somo/doc/manual/somo/somo_add_saxs.html
    M us_somo/somo/doc/manual/somo/somo_advanced_config.html
    M us_somo/somo/doc/manual/somo/somo_batch.html
    A us_somo/somo/doc/manual/somo/somo_clear_directories_alert.png
    M us_somo/somo/doc/manual/somo/somo_misc.html
    M us_somo/somo/doc/manual/somo/somo_saxs.html
    M us_somo/somo/doc/manual/somo/somo_saxs_load_csv.html
    M us_somo/somo/doc/manual/somo/somo_saxs_options.html
    A us_somo/somo/doc/manual/somo/somo_saxs_residuals.html

  Log Message:
  -----------
  *beta* somo doc etc updates


  Commit: af41970d3cd102ca59a10b4af57cd58fc8f478eb
      https://github.com/ehb54/ultrascan3/commit/af41970d3cd102ca59a10b4af57cd58fc8f478eb
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-03-09 (Thu, 09 Mar 2023)

  Changed paths:
    M us_somo/develop/generic.pri
    M us_somo/develop/include/us_hydrodyn.h
    M us_somo/develop/include/us_hydrodyn_advanced_config.h
    M us_somo/develop/include/us_hydrodyn_batch.h
    M us_somo/develop/include/us_hydrodyn_misc.h
    M us_somo/develop/include/us_hydrodyn_pdbdefs.h
    M us_somo/develop/include/us_hydrodyn_sas_options_misc.h
    M us_somo/develop/include/us_hydrodyn_saxs.h
    M us_somo/develop/include/us_hydrodyn_saxs_hplc.h
    M us_somo/develop/include/us_hydrodyn_saxs_hplc_options.h
    M us_somo/develop/include/us_hydrodyn_saxs_iqq_load_csv.h
    M us_somo/develop/include/us_hydrodyn_saxs_load_csv.h
    M us_somo/develop/include/us_hydrodyn_saxs_residuals.h
    M us_somo/develop/include/us_hydrodyn_zeno.h
    M us_somo/develop/include/us_mqt.h
    M us_somo/develop/include/us_saxs_util.h
    M us_somo/develop/include/us_vector.h
    M us_somo/develop/src/us_hydrodyn.cpp
    M us_somo/develop/src/us_hydrodyn_addatom.cpp
    M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
    M us_somo/develop/src/us_hydrodyn_advanced_config.cpp
    M us_somo/develop/src/us_hydrodyn_batch.cpp
    M us_somo/develop/src/us_hydrodyn_beads.cpp
    M us_somo/develop/src/us_hydrodyn_core.cpp
    M us_somo/develop/src/us_hydrodyn_grpy.cpp
    M us_somo/develop/src/us_hydrodyn_load.cpp
    M us_somo/develop/src/us_hydrodyn_misc.cpp
    M us_somo/develop/src/us_hydrodyn_other.cpp
    M us_somo/develop/src/us_hydrodyn_results.cpp
    M us_somo/develop/src/us_hydrodyn_sas_options_misc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_wheel.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_ift.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_residuals.cpp
    M us_somo/develop/src/us_hydrodyn_script.cpp
    M us_somo/develop/src/us_hydrodyn_settings.cpp
    M us_somo/develop/src/us_hydrodyn_util.cpp
    M us_somo/develop/src/us_hydrodyn_zeno.cpp
    M us_somo/develop/src/us_mqt.cpp
    M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
    M us_somo/develop/src/us_saxs_util_pm.cpp
    M us_somo/develop/src/us_saxs_util_static.cpp
    M us_somo/develop/src/us_vector.cpp
    M us_somo/develop/us3_hydrodyn/main.cpp

  Log Message:
  -----------
  *beta* somo updates


  Commit: 434a670988fce6f2a4196e3a0198dc4ff8438c52
      https://github.com/ehb54/ultrascan3/commit/434a670988fce6f2a4196e3a0198dc4ff8438c52
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-03-09 (Thu, 09 Mar 2023)

  Changed paths:
    M us_somo/somo/doc/manual/somo/somo_saxs_load_csv.html

  Log Message:
  -----------
  *beta* doc typo fix


  Commit: 6c8506eaded93f4f60cab28b1e379ae28d4e4a4b
      https://github.com/ehb54/ultrascan3/commit/6c8506eaded93f4f60cab28b1e379ae28d4e4a4b
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2023-03-12 (Sun, 12 Mar 2023)

  Changed paths:
    M us_somo/somo/doc/manual/somo/somo_saxs_load_csv.html

  Log Message:
  -----------
  *beta* minor doc update


  Commit: 20918da275b0ad479738a8540320198cbca61418
      https://github.com/ehb54/ultrascan3/commit/20918da275b0ad479738a8540320198cbca61418
  Author: ehb54 <ehb54 at users.noreply.github.com>
  Date:   2023-03-12 (Sun, 12 Mar 2023)

  Changed paths:
    M us_somo/develop/generic.pri
    M us_somo/develop/include/us_hydrodyn.h
    M us_somo/develop/include/us_hydrodyn_advanced_config.h
    M us_somo/develop/include/us_hydrodyn_batch.h
    M us_somo/develop/include/us_hydrodyn_misc.h
    M us_somo/develop/include/us_hydrodyn_pdbdefs.h
    M us_somo/develop/include/us_hydrodyn_sas_options_misc.h
    M us_somo/develop/include/us_hydrodyn_saxs.h
    M us_somo/develop/include/us_hydrodyn_saxs_hplc.h
    M us_somo/develop/include/us_hydrodyn_saxs_hplc_options.h
    M us_somo/develop/include/us_hydrodyn_saxs_iqq_load_csv.h
    M us_somo/develop/include/us_hydrodyn_saxs_load_csv.h
    M us_somo/develop/include/us_hydrodyn_saxs_residuals.h
    M us_somo/develop/include/us_hydrodyn_zeno.h
    M us_somo/develop/include/us_mqt.h
    M us_somo/develop/include/us_saxs_util.h
    M us_somo/develop/include/us_vector.h
    M us_somo/develop/src/us_hydrodyn.cpp
    M us_somo/develop/src/us_hydrodyn_addatom.cpp
    M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
    M us_somo/develop/src/us_hydrodyn_addresidue.cpp
    M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
    M us_somo/develop/src/us_hydrodyn_advanced_config.cpp
    M us_somo/develop/src/us_hydrodyn_batch.cpp
    M us_somo/develop/src/us_hydrodyn_beads.cpp
    M us_somo/develop/src/us_hydrodyn_core.cpp
    M us_somo/develop/src/us_hydrodyn_grpy.cpp
    M us_somo/develop/src/us_hydrodyn_load.cpp
    M us_somo/develop/src/us_hydrodyn_misc.cpp
    M us_somo/develop/src/us_hydrodyn_other.cpp
    M us_somo/develop/src/us_hydrodyn_results.cpp
    M us_somo/develop/src/us_hydrodyn_sas_options_misc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_wheel.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_ift.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
    M us_somo/develop/src/us_hydrodyn_saxs_residuals.cpp
    M us_somo/develop/src/us_hydrodyn_script.cpp
    M us_somo/develop/src/us_hydrodyn_settings.cpp
    M us_somo/develop/src/us_hydrodyn_util.cpp
    M us_somo/develop/src/us_hydrodyn_zeno.cpp
    M us_somo/develop/src/us_mqt.cpp
    M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
    M us_somo/develop/src/us_saxs_util_pm.cpp
    M us_somo/develop/src/us_saxs_util_static.cpp
    M us_somo/develop/src/us_vector.cpp
    M us_somo/develop/us3_hydrodyn/main.cpp
    M us_somo/etc/somo.config.new
    M us_somo/etc/somo.defaults.new
    M us_somo/etc/somo.saxs_atoms.new
    A us_somo/somo/doc/manual/somo/Rg_from_Pr.png
    A us_somo/somo/doc/manual/somo/somo-SAS_Miscellaneous_Options_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_CSV1_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_CSV1_new3.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_Plotted_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Load_Plotted_new2.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new2.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS1_new3.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_graph_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_percent_diff.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_res_div_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_res_only.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_no_SD_results_with_contributing.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_percent_diff.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_res_div_SD.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_res_only.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_p_r_with_SD_results_with_contributing.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_NNLS_progwindow_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_new.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_panel_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Pr_progress_new.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_SAXS_Load_CSV_new1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_SAXS_Load_CSV_new2.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_Scaling_residuals_new.png
    M us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load-1E8L_WAXSiS_models.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_load_plotted_1E8L_WAXSiS_models1.png
    A us_somo/somo/doc/manual/somo/somo-SAXS_SANS_new1.png
    A us_somo/somo/doc/manual/somo/somo-advanced_conf_new.png
    A us_somo/somo/doc/manual/somo/somo-misc1New.png
    M us_somo/somo/doc/manual/somo/somo_add_saxs.html
    M us_somo/somo/doc/manual/somo/somo_advanced_config.html
    M us_somo/somo/doc/manual/somo/somo_batch.html
    A us_somo/somo/doc/manual/somo/somo_clear_directories_alert.png
    M us_somo/somo/doc/manual/somo/somo_misc.html
    M us_somo/somo/doc/manual/somo/somo_saxs.html
    M us_somo/somo/doc/manual/somo/somo_saxs_load_csv.html
    M us_somo/somo/doc/manual/somo/somo_saxs_options.html
    A us_somo/somo/doc/manual/somo/somo_saxs_residuals.html

  Log Message:
  -----------
  Merge pull request #60 from ehb54/release-beta

SOMO Release beta to master updates


Compare: https://github.com/ehb54/ultrascan3/compare/601651585305...20918da275b0

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