[us-commits] [ehb54/ultrascan3] ea0b94: 8. AProfile: Report -- a sublte bug fixed for corr...
aaron-auc
noreply at github.com
Sat Oct 18 11:19:02 MDT 2025
Branch: refs/heads/534-enhancement-version-upgrade
Home: https://github.com/ehb54/ultrascan3
Commit: ea0b94a1f952fafffb14e048ef59ac09de4dae31
https://github.com/ehb54/ultrascan3/commit/ea0b94a1f952fafffb14e048ef59ac09de4dae31
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-07-09 (Wed, 09 Jul 2025)
Changed paths:
M gui/us_report_gui.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_anapro_utils.cpp
Log Message:
-----------
8. AProfile: Report -- a sublte bug fixed for correctly inheriting exp. duration timefrom the main protocol into AProfile's->reports when setting protocol from scratch for the first time; also make exp. dur. fileds read-only ...
Commit: 5ea9fa1c7dd4d0508386d70cc3f96d2f33275adf
https://github.com/ehb54/ultrascan3/commit/5ea9fa1c7dd4d0508386d70cc3f96d2f33275adf
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-07-10 (Thu, 10 Jul 2025)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
GMP | R&D -- replace all QwtCounters with QSpinBoxes, to better control and validate inputs ...
Commit: f8117c1eed92f953f483005cb49d40818b971cc9
https://github.com/ehb54/ultrascan3/commit/f8117c1eed92f953f483005cb49d40818b971cc9
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-07-28 (Mon, 28 Jul 2025)
Changed paths:
M gui/us_widgets.cpp
M gui/us_widgets_dialog.cpp
Log Message:
-----------
GMP | R&D -- change ranges for dd-hh-mm-ss QSpinBoxes in 1. EXP.: 3. Speeds...
Commit: 0fc8fc48c10614b999f6720cdcc5ffeb354dd28f
https://github.com/ehb54/ultrascan3/commit/0fc8fc48c10614b999f6720cdcc5ffeb354dd28f
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-08-04 (Mon, 04 Aug 2025)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_data_loader.cpp
M gui/us_load_auc.cpp
M gui/us_loadable_noise.cpp
M gui/us_model_loader.cpp
M gui/us_noise_loader.cpp
M gui/us_run_details2.cpp
M gui/us_tmst_plot.cpp
M gui/us_window_message.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_astfem_sim/us_clipdata.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_combine_models/us_combine_models.cpp
M programs/us_convert/us_convert_gui.cpp
M programs/us_convert/us_get_run.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_edit/us_edit.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_export_legacy/us_export.cpp
M programs/us_fematch/us_fematch.cpp
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_manage_data/us_data_model.cpp
M programs/us_manage_data/us_data_tree.cpp
M programs/us_manage_data/us_manage_data.cpp
M programs/us_mpi_analysis/2dsa_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/pcsa_master.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_spectra/us_mwl_spectra.cpp
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_mwlr_viewer/us_mwlr_viewer.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa_process.cpp
M programs/us_pcsa/us_rpscan.cpp
M programs/us_rasmol_control/us_rasmol_control.cpp
M programs/us_reporter/us_reporter.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_vhw_combine/us_vhw_combine.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
issue 533 : convert QString::sprintf to asprintf in gui & programs
Commit: 54079b9265341294439c9ae4167fc5a6cadad909
https://github.com/ehb54/ultrascan3/commit/54079b9265341294439c9ae4167fc5a6cadad909
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-08-04 (Mon, 04 Aug 2025)
Changed paths:
M gui/us_extinctfitter_gui.cpp
M gui/us_minimize.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_astfem_sim/us_clipdata.cpp
M programs/us_config/us_color.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_spectrum/us_spectrum.cpp
Log Message:
-----------
issue 533 : convert QString - varname.sprintf to varname = asprintf in gui & programs
Commit: b31ecaceddee2236fab9e0fb4465885db648a952
https://github.com/ehb54/ultrascan3/commit/b31ecaceddee2236fab9e0fb4465885db648a952
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-08-04 (Mon, 04 Aug 2025)
Changed paths:
M gui/us_analysis_base2.cpp
M gui/us_analyte_gui.cpp
M gui/us_extinctfitter_gui.cpp
M gui/us_minimize.cpp
M gui/us_run_details2.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_edit/us_edit.cpp
M programs/us_equiltime/us_equiltime.cpp
M programs/us_fematch/us_fematch.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_mpi_analysis/dmga_worker.cpp
M programs/us_mpi_analysis/ga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mpi_analysis/us_mpi_parse.cpp
M programs/us_spectrum/us_spectrum.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
Log Message:
-----------
issue 533 : convert QString - the last of sprintf in gui & programs
Commit: 3fd01182e1ee82fcbf4e2dfc5710d5bf9bd99207
https://github.com/ehb54/ultrascan3/commit/3fd01182e1ee82fcbf4e2dfc5710d5bf9bd99207
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-08-04 (Mon, 04 Aug 2025)
Changed paths:
M programs/us_mpi_analysis/us_mpi_analysis.cpp
Log Message:
-----------
issue 533 : convert QString - the last of sprintf in gui & programs
Commit: 399d845e5667346225803b9ac45b753c7676e39d
https://github.com/ehb54/ultrascan3/commit/399d845e5667346225803b9ac45b753c7676e39d
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_convert/us_convert_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M utils/us_run_protocol.h
Log Message:
-----------
GMP | R&D : dataDisk -- differentiate between RI-uploaded data to be intensity or pseudo-absorbance; act accordingly in 3. IMPORT; report in REPORT; ...
Commit: f924d79f3ecf67db15ced074ac2b50a4cafc9c72
https://github.com/ehb54/ultrascan3/commit/f924d79f3ecf67db15ced074ac2b50a4cafc9c72
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_convert/us_convert_gui.cpp
Log Message:
-----------
[1] GMP | R&D : dataDisk -- differentiate between RI-uploaded data to be intensity or pseudo-absorbance; act accordingly in 3. IMPORT; report in REPORT; ...
Commit: a95afc6b2d4b4b118c7e84a6e1258fbf85076bf0
https://github.com/ehb54/ultrascan3/commit/a95afc6b2d4b4b118c7e84a6e1258fbf85076bf0
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[2] GMP | R&D : dataDisk -- differentiate between RI-uploaded data to be intensity or pseudo-absorbance; act accordingly in 3. IMPORT; report in REPORT; ...
Commit: 8f9f1257b799c491fa5629c912071eabb435388f
https://github.com/ehb54/ultrascan3/commit/8f9f1257b799c491fa5629c912071eabb435388f
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[3] GMP | R&D : dataDisk -- differentiate between RI-uploaded data to be intensity or pseudo-absorbance; act accordingly in 3. IMPORT; report in REPORT; ...
Commit: c3a261985e7e3979e7a9a11fcad5c851e739f41b
https://github.com/ehb54/ultrascan3/commit/c3a261985e7e3979e7a9a11fcad5c851e739f41b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
Us_Edit -- address non-hidden widgets in different constructors && scenarios ...
Commit: 3ad35587a1da03cc9926344ac40bb3d364a32d24
https://github.com/ehb54/ultrascan3/commit/3ad35587a1da03cc9926344ac40bb3d364a32d24
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[1]Us_Edit -- address non-hidden widgets in different constructors && scenarios ...
Commit: d6a4a469c86320252916565b3bd860c07cab4b1f
https://github.com/ehb54/ultrascan3/commit/d6a4a469c86320252916565b3bd860c07cab4b1f
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[2]Us_Edit -- address non-hidden widgets in different constructors && scenarios ...
Commit: d3528cb233647917b4f76c9423f9deae1983f2bd
https://github.com/ehb54/ultrascan3/commit/d3528cb233647917b4f76c9423f9deae1983f2bd
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-06 (Mon, 06 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[3]Us_Edit -- address non-hidden widgets in different constructors && scenarios ...
Commit: 6dc67538e4d0efedcf66715d9f44781f3f8e27e4
https://github.com/ehb54/ultrascan3/commit/6dc67538e4d0efedcf66715d9f44781f3f8e27e4
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-08 (Wed, 08 Oct 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
A .github/workflows/static-analysis.yml
A .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
A admin/cmake/FindQwt.cmake
A admin/cmake/us_version.h.in
A admin/test/docker/Dockerfile
R doc/manual/README
A doc/manual/README.md
A gui/CMakeLists.txt
M gui/us_abstractrotor_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_data_loader.cpp
M gui/us_failed_gmp_run_gui.cpp
M gui/us_load_auc.cpp
M gui/us_loadable_noise.cpp
R gui/us_model_editor.cpp
R gui/us_model_editor.h
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_model_loader.cpp
M gui/us_model_loader.h
M gui/us_noise_loader.cpp
M gui/us_noise_loader.h
M gui/us_project_gui.cpp
M gui/us_rotor_gui.cpp
M gui/us_solution_gui.cpp
A programs/CMakeLists.txt
M programs/us/us.cpp
M programs/us/us_win_data.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_astfem_sim/us_clipdata.cpp
A programs/us_autoflow_analysis/CMakeLists.txt
A programs/us_com_project/CMakeLists.txt
A programs/us_com_project_academic/CMakeLists.txt
M programs/us_config/us_database.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_config/us_xpnhost_db.h
M programs/us_convert/us_get_run.cpp
M programs/us_convert/us_select_triples.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
A programs/us_experiment/CMakeLists.txt
M programs/us_experiment/us_experiment_gui_optima.cpp
A programs/us_fematch/CMakeLists.txt
M programs/us_fematch/us_fematch.cpp
A programs/us_fit_meniscus/CMakeLists.txt
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_manage_data/us_manage_data.cpp
A programs/us_mwl_species_fit/CMakeLists.txt
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa_process.cpp
M programs/us_pcsa/us_rpscan.cpp
A programs/us_protocol_dev/CMakeLists.txt
A programs/us_query_rmsd/CMakeLists.txt
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_experiment_ra.cpp
M programs/us_ramp/us_experiment_ra.h
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_ramp_gui.cpp
M programs/us_reporter/us_reporter.cpp
A programs/us_reporter_gmp/CMakeLists.txt
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
A qwtplot3d/CMakeLists.txt
A test-docker.sh
A test/README
A test/common/qt_test_base.cpp
A test/common/qt_test_base.h
M test/utils/CMakeLists.txt
A test/utils/mock/mock_us_db2.h
A test/utils/test_mock_us_db2.cpp
A test/utils/test_us_ana_profile.cpp
A test/utils/test_us_analyte.cpp
A test/utils/test_us_astfem_math.cpp
A test/utils/test_us_buffer.cpp
A test/utils/test_us_crc.cpp
A test/utils/test_us_crypto.cpp
A test/utils/test_us_dataIO.cpp
M test/utils/test_us_datafiles.cpp
R test/utils/test_us_datafiles.h
A test/utils/test_us_db2.cpp
A test/utils/test_us_math2.cpp
A test/utils/test_us_matrix.cpp
A test/utils/test_us_memory.cpp
A test/utils/test_us_model.cpp
A test/utils/test_us_project.cpp
A test/utils/test_us_settings.cpp
R test/utils/test_us_simparams.cpp
R test/utils/test_us_simparams.h
A test/utils/test_us_simparms.cpp
A test/utils/test_us_stiffbase.cpp
A test/utils/test_us_time_state.cpp
A test/utils/test_us_timer.cpp
M test/utils/test_us_util.cpp
R test/utils/test_us_util.h
M test/utils/test_us_utils_main.cpp
A test/utils/test_us_vector.cpp
M us_somo/develop/include/us_zeno_cxx.h
M us_somo/develop/include/us_zeno_cxx_nf.h
M utils/CMakeLists.txt
A utils/ius_db2.h
M utils/us_ana_profile.cpp
M utils/us_analyte.cpp
M utils/us_analyte.h
M utils/us_astfem_rsa.cpp
M utils/us_buffer.cpp
M utils/us_buffer.h
M utils/us_cfa_data.cpp
M utils/us_dataIO.cpp
M utils/us_dataIO.h
M utils/us_db2.cpp
M utils/us_db2.h
M utils/us_eprofile.cpp
M utils/us_eprofile.h
M utils/us_hardware.cpp
M utils/us_hardware.h
M utils/us_lamm_astfvm.cpp
M utils/us_model.cpp
M utils/us_model.h
M utils/us_noise.cpp
M utils/us_noise.h
M utils/us_project.cpp
M utils/us_project.h
M utils/us_report.cpp
M utils/us_report.h
M utils/us_rotor.cpp
M utils/us_rotor.h
M utils/us_simparms.cpp
M utils/us_simparms.h
M utils/us_solution.cpp
M utils/us_solution.h
M utils/us_solution_vals.cpp
M utils/us_solution_vals.h
M utils/us_solve_sim.cpp
M utils/us_solve_sim.h
M utils/us_time_state.cpp
M utils/us_time_state.h
Log Message:
-----------
Merge pull request #269 from ehb54/master
Bring this branch to the latest master state
Commit: af2045563aa019e69852ce42d22235076e6d33f7
https://github.com/ehb54/ultrascan3/commit/af2045563aa019e69852ce42d22235076e6d33f7
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-09 (Thu, 09 Oct 2025)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
GMP: 1. EXP. -- for dataDisk option, do not block submission due to disconnected Optima; block otherwise...
Commit: 8d1c1b4dcbf1b2c698688d5aad236d07578858d5
https://github.com/ehb54/ultrascan3/commit/8d1c1b4dcbf1b2c698688d5aad236d07578858d5
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-09 (Thu, 09 Oct 2025)
Changed paths:
M programs/us_fit_meniscus/us_fit_meniscus.cpp
Log Message:
-----------
GMP: 5. ANALYSIS: FITMEN -- disable update btn right after it's clicked...
Commit: 34e1993274025890c5cceda224c19973aa5b2ae2
https://github.com/ehb54/ultrascan3/commit/34e1993274025890c5cceda224c19973aa5b2ae2
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-10 (Fri, 10 Oct 2025)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
Merge pull request #271 from ehb54/alexey-dev-issue576
GMP: 1. EXP. -- for dataDisk option, do not block submission due to disconnected Optima; block otherwise..
Commit: bdba96a7dc97bb081790098cfb3d72bc10a32c18
https://github.com/ehb54/ultrascan3/commit/bdba96a7dc97bb081790098cfb3d72bc10a32c18
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-10 (Fri, 10 Oct 2025)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
Merge pull request #274 from ehb54/master
Bring to the current master state
Commit: 7c722f2fc3f2a82a9d5063fe4aecc128f465873d
https://github.com/ehb54/ultrascan3/commit/7c722f2fc3f2a82a9d5063fe4aecc128f465873d
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-10 (Fri, 10 Oct 2025)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
Merge pull request #275 from ehb54/master
Bring to current master state
Commit: 236ab6f7717916a81de574fbe27299f18683a06c
https://github.com/ehb54/ultrascan3/commit/236ab6f7717916a81de574fbe27299f18683a06c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-11 (Sat, 11 Oct 2025)
Changed paths:
M utils/us_buffer.cpp
Log Message:
-----------
Prevent early exit when saving a new buffer to database
Commit: 7388255d2bb422f8dca061365e459ac69e9267a4
https://github.com/ehb54/ultrascan3/commit/7388255d2bb422f8dca061365e459ac69e9267a4
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-11 (Sat, 11 Oct 2025)
Changed paths:
M gui/us_data_loader.cpp
Log Message:
-----------
Add null checks before adding child items to make static analysis happy
Commit: f3022f734322210c7a6d74c4d72f7d5871d7f9c2
https://github.com/ehb54/ultrascan3/commit/f3022f734322210c7a6d74c4d72f7d5871d7f9c2
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-11 (Sat, 11 Oct 2025)
Changed paths:
M gui/us_data_loader.cpp
Log Message:
-----------
Fix formatting in us_data_loader.cpp
Commit: 3edada407972c86d03c8f30822ebf6a3c1166357
https://github.com/ehb54/ultrascan3/commit/3edada407972c86d03c8f30822ebf6a3c1166357
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M gui/CMakeLists.txt
Log Message:
-----------
Include *.ui and *.qrc in gui build to ensure all resources and forms are available
Commit: 427e601f770f5eb39efb249bca9eb81b557561ae
https://github.com/ehb54/ultrascan3/commit/427e601f770f5eb39efb249bca9eb81b557561ae
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M utils/us_buffer.cpp
Log Message:
-----------
Clean up debug statements and enhance comments
Removed commented debug statements and added clarifying comments for variable assignments.
Commit: 0bd193389e5967e65d03d34b4ce6dcf0f3817f84
https://github.com/ehb54/ultrascan3/commit/0bd193389e5967e65d03d34b4ce6dcf0f3817f84
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M gui/CMakeLists.txt
Log Message:
-----------
Merge pull request #280 from ehb54/lukas/cmake-gui-resources
Include *.ui and *.qrc in us_gui library
Commit: 72ff576e489d378f03adc4296b68bd001b1c649e
https://github.com/ehb54/ultrascan3/commit/72ff576e489d378f03adc4296b68bd001b1c649e
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M programs/us_convert/us_convert_gui.cpp
M programs/us_edit/us_edit.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M utils/us_run_protocol.h
Log Message:
-----------
Merge pull request #273 from ehb54/alexey-dev-issue567
Alexey dev issue567: Deal with dataDisk Pseudoabsorbance type && correct GUI representaitons of US_Edit scenarios
Commit: eb8022621705540d2e5a0010b5141f3bd1620591
https://github.com/ehb54/ultrascan3/commit/eb8022621705540d2e5a0010b5141f3bd1620591
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M programs/us_fit_meniscus/us_fit_meniscus.cpp
Log Message:
-----------
Merge pull request #272 from ehb54/alexey-dev-issue575
GMP: 5. ANALYSIS: FITMEN -- disable update btn right after it's clicked..
Commit: 18b990073be39e32a749536729cba62d576e6c98
https://github.com/ehb54/ultrascan3/commit/18b990073be39e32a749536729cba62d576e6c98
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-13 (Mon, 13 Oct 2025)
Changed paths:
M gui/us_report_gui.cpp
M gui/us_widgets.cpp
M gui/us_widgets_dialog.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
Merge pull request #237 from ehb54/alexey-dev-issue521
Alexey dev issue521: Correct and read-only exp. time in channels reports, qspinboxes instead of qwtcounters to control input
Commit: d131cbbccf4b88f4a39d285fb99a84ccfaacb536
https://github.com/ehb54/ultrascan3/commit/d131cbbccf4b88f4a39d285fb99a84ccfaacb536
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
M utils/us_simparms.cpp
M utils/us_simparms.h
Log Message:
-----------
GMP: 4. EDIT -- add rotor stretch to bottom in edit profiles...
Commit: 567202c3572f02c0b782f92791cac022e863829c
https://github.com/ehb54/ultrascan3/commit/567202c3572f02c0b782f92791cac022e863829c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M utils/us_buffer.cpp
Log Message:
-----------
Merge pull request #278 from ehb54/lukas/us_buffer_saveToDB
Prevent early exit when saving a new buffer to database
Commit: 2d1d5599a18b1105dd622fb570a284c2af9b3027
https://github.com/ehb54/ultrascan3/commit/2d1d5599a18b1105dd622fb570a284c2af9b3027
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_astfem_sim/us_astfem_sim.cpp
Log Message:
-----------
us_astfem_sim: save TI, RI noises in the result directory
Commit: 52692bf1ec74f08f07f036d50913983f0cb4902c
https://github.com/ehb54/ultrascan3/commit/52692bf1ec74f08f07f036d50913983f0cb4902c
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_astfem_sim/us_astfem_sim.cpp
Log Message:
-----------
us_astfem_sim.cpp: fix writing the RI csv profile for multi-speed experiments
Commit: 2bb6c53d1c011cceb17b9ebabc3e0700fea48879
https://github.com/ehb54/ultrascan3/commit/2bb6c53d1c011cceb17b9ebabc3e0700fea48879
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[debug version, stops at XML write]GMP: 4. EDIT -- add rotor stretch to bottom in edit profiles...
Commit: 2dfbe74efa5e6ca4ebd7b4acb23c8198c6eea001
https://github.com/ehb54/ultrascan3/commit/2dfbe74efa5e6ca4ebd7b4acb23c8198c6eea001
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[[1]debug version, stops at XML write]GMP: 4. EDIT -- add rotor stretch to bottom in edit profiles...
Commit: 5d05e1a2439de5fa9adb431619c350ae188fcf31
https://github.com/ehb54/ultrascan3/commit/5d05e1a2439de5fa9adb431619c350ae188fcf31
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_astfem_sim.h
Log Message:
-----------
us_astfem_sim: save TI,RI noise profiles into the outout directory
Commit: 883d73df2ac05d1717a2f924737d36a6ddda5a49
https://github.com/ehb54/ultrascan3/commit/883d73df2ac05d1717a2f924737d36a6ddda5a49
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_edit/us_edit.cpp
M utils/us_simparms.cpp
M utils/us_simparms.h
Log Message:
-----------
Merge pull request #282 from ehb54/alexey-dev-issue577
GMP: 4. EDIT -- add rotor stretch to bottom in edit profiles...
Commit: 1de51a8c4fb82a5cbb3cf09653f9e235a54c327c
https://github.com/ehb54/ultrascan3/commit/1de51a8c4fb82a5cbb3cf09653f9e235a54c327c
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-14 (Tue, 14 Oct 2025)
Changed paths:
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_astfem_sim.h
Log Message:
-----------
Merge pull request #281 from samo38/issue_587
us_astfem_sim: save TI, RI noises in the result directory
Commit: ecfbe0af9e3b7e855a5d67f491614c06b26261f1
https://github.com/ehb54/ultrascan3/commit/ecfbe0af9e3b7e855a5d67f491614c06b26261f1
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-10-15 (Wed, 15 Oct 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
A .github/workflows/static-analysis.yml
A .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
A admin/cmake/FindQwt.cmake
A admin/cmake/us_version.h.in
A admin/pam/pam_no_ad/Makefile
A admin/pam/pam_no_ad/README.md
A admin/pam/pam_no_ad/files/mariadb
A admin/pam/pam_no_ad/files/php
A admin/pam/pam_no_ad/files/sssd.conf
A admin/pam/pam_no_ad/files/system-auth-nosss
A admin/pam/pam_no_ad/pam_auth_pamtester.php
A admin/pam/pam_no_ad/pam_auth_test.php
A admin/test/docker/Dockerfile
R doc/manual/README
A doc/manual/README.md
M doc/manual/advanced_config.body
A gui/CMakeLists.txt
M gui/us_abstractrotor_gui.cpp
M gui/us_analysis_base2.cpp
M gui/us_buffer_gui.cpp
M gui/us_data_loader.cpp
M gui/us_failed_gmp_run_gui.cpp
M gui/us_load_auc.cpp
M gui/us_loadable_noise.cpp
R gui/us_model_editor.cpp
R gui/us_model_editor.h
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_model_loader.cpp
M gui/us_model_loader.h
M gui/us_noise_loader.cpp
M gui/us_noise_loader.h
M gui/us_project_gui.cpp
M gui/us_report_gui.cpp
M gui/us_rotor_gui.cpp
M gui/us_scan_excl_gui.cpp
M gui/us_scan_excl_gui.h
M gui/us_solution_gui.cpp
M gui/us_widgets.cpp
M gui/us_widgets_dialog.cpp
A programs/CMakeLists.txt
M programs/us/us.cpp
M programs/us/us_win_data.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_astfem_sim.h
A programs/us_autoflow_analysis/CMakeLists.txt
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
A programs/us_com_project/CMakeLists.txt
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
A programs/us_com_project_academic/CMakeLists.txt
M programs/us_config/us_database.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_config/us_xpnhost_db.h
M programs/us_convert/us_convert_gui.cpp
M programs/us_convert/us_select_triples.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
A programs/us_experiment/CMakeLists.txt
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
A programs/us_fematch/CMakeLists.txt
M programs/us_fematch/us_fematch.cpp
M programs/us_fematch/us_resplot_fem.cpp
A programs/us_fit_meniscus/CMakeLists.txt
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_fit_meniscus/us_fit_meniscus_main.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_grid_editor/us_grid_editor.cpp
M programs/us_grid_editor/us_grid_editor.h
M programs/us_integral/us_integral.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
A programs/us_mwl_species_fit/CMakeLists.txt
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa_process.cpp
A programs/us_protocol_dev/CMakeLists.txt
A programs/us_query_rmsd/CMakeLists.txt
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_experiment_ra.cpp
M programs/us_ramp/us_experiment_ra.h
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_ramp_gui.cpp
A programs/us_reporter_gmp/CMakeLists.txt
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
A qwtplot3d/CMakeLists.txt
A test-docker.sh
A test/README
A test/common/qt_test_base.cpp
A test/common/qt_test_base.h
M test/utils/CMakeLists.txt
A test/utils/mock/mock_us_db2.h
A test/utils/test_mock_us_db2.cpp
A test/utils/test_us_ana_profile.cpp
A test/utils/test_us_analyte.cpp
A test/utils/test_us_astfem_math.cpp
A test/utils/test_us_buffer.cpp
A test/utils/test_us_crc.cpp
A test/utils/test_us_crypto.cpp
A test/utils/test_us_dataIO.cpp
M test/utils/test_us_datafiles.cpp
R test/utils/test_us_datafiles.h
A test/utils/test_us_db2.cpp
A test/utils/test_us_math2.cpp
A test/utils/test_us_matrix.cpp
A test/utils/test_us_memory.cpp
A test/utils/test_us_model.cpp
A test/utils/test_us_project.cpp
A test/utils/test_us_settings.cpp
R test/utils/test_us_simparams.cpp
R test/utils/test_us_simparams.h
A test/utils/test_us_simparms.cpp
A test/utils/test_us_stiffbase.cpp
A test/utils/test_us_time_state.cpp
A test/utils/test_us_timer.cpp
M test/utils/test_us_util.cpp
R test/utils/test_us_util.h
M test/utils/test_us_utils_main.cpp
A test/utils/test_us_vector.cpp
M us_somo/develop/include/us3_defines.h
A us_somo/develop/include/us_band_broaden.h
M us_somo/develop/include/us_hydrodyn.h
M us_somo/develop/include/us_hydrodyn_cluster_best.h
M us_somo/develop/include/us_hydrodyn_dad.h
M us_somo/develop/include/us_hydrodyn_hydro.h
M us_somo/develop/include/us_hydrodyn_hydro_zeno.h
M us_somo/develop/include/us_hydrodyn_mals.h
M us_somo/develop/include/us_hydrodyn_saxs.h
M us_somo/develop/include/us_hydrodyn_saxs_buffer.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_ciq.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_fit.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_movie.h
M us_somo/develop/include/us_json.h
M us_somo/develop/include/us_matrix.h
M us_somo/develop/include/us_multi_column.h
M us_somo/develop/include/us_pfortran.h
M us_somo/develop/include/us_saxs_util.h
M us_somo/develop/include/us_tar.h
M us_somo/develop/include/us_tnt_jama.h
M us_somo/develop/include/us_unicode.h
M us_somo/develop/include/us_zeno_cxx.h
M us_somo/develop/include/us_zeno_cxx_nf.h
M us_somo/develop/libus_somo.pro
M us_somo/develop/src/qwt/scrollzoomer.cpp
M us_somo/develop/src/us3i_color.cpp
M us_somo/develop/src/us3i_util.cpp
A us_somo/develop/src/us_band_broaden.cpp
M us_somo/develop/src/us_color.cpp
M us_somo/develop/src/us_config_gui.cpp
M us_somo/develop/src/us_dirhist.cpp
M us_somo/develop/src/us_ffd.cpp
M us_somo/develop/src/us_font.cpp
M us_somo/develop/src/us_fractal_dimension.cpp
M us_somo/develop/src/us_help.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_addatom.cpp
M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
M us_somo/develop/src/us_hydrodyn_addresidue.cpp
M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
M us_somo/develop/src/us_hydrodyn_batch.cpp
M us_somo/develop/src/us_hydrodyn_bd_core.cpp
M us_somo/develop/src/us_hydrodyn_bd_load_results_opts.cpp
M us_somo/develop/src/us_hydrodyn_bd_options.cpp
M us_somo/develop/src/us_hydrodyn_beads.cpp
M us_somo/develop/src/us_hydrodyn_beads_load.cpp
M us_somo/develop/src/us_hydrodyn_cluster.cpp
M us_somo/develop/src/us_hydrodyn_cluster_advanced.cpp
M us_somo/develop/src/us_hydrodyn_cluster_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster_results.cpp
M us_somo/develop/src/us_hydrodyn_cluster_status.cpp
M us_somo/develop/src/us_hydrodyn_cluster_submit.cpp
M us_somo/develop/src/us_hydrodyn_core.cpp
M us_somo/develop/src/us_hydrodyn_dad.cpp
M us_somo/develop/src/us_hydrodyn_dad_gg.cpp
M us_somo/develop/src/us_hydrodyn_dad_gui.cpp
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_guinier.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_powerfit.cpp
M us_somo/develop/src/us_hydrodyn_dad_movie.cpp
M us_somo/develop/src/us_hydrodyn_dad_options.cpp
M us_somo/develop/src/us_hydrodyn_dad_parameters.cpp
M us_somo/develop/src/us_hydrodyn_dad_plots.cpp
M us_somo/develop/src/us_hydrodyn_dad_svd.cpp
M us_somo/develop/src/us_hydrodyn_dad_util.cpp
M us_somo/develop/src/us_hydrodyn_dammin_opts.cpp
M us_somo/develop/src/us_hydrodyn_fractal_dimension.cpp
M us_somo/develop/src/us_hydrodyn_grid_atob.cpp
M us_somo/develop/src/us_hydrodyn_grpy.cpp
M us_somo/develop/src/us_hydrodyn_hydrate.cpp
M us_somo/develop/src/us_hydrodyn_hydrate_align.cpp
M us_somo/develop/src/us_hydrodyn_hydro.cpp
M us_somo/develop/src/us_hydrodyn_hydro_zeno.cpp
M us_somo/develop/src/us_hydrodyn_info.cpp
M us_somo/develop/src/us_hydrodyn_load.cpp
M us_somo/develop/src/us_hydrodyn_mals.cpp
M us_somo/develop/src/us_hydrodyn_mals_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes_guinier.cpp
M us_somo/develop/src/us_hydrodyn_mals_movie.cpp
M us_somo/develop/src/us_hydrodyn_mals_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_plots.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_guinier.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_scale.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_movie.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_plots.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_util.cpp
M us_somo/develop/src/us_hydrodyn_mals_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_util.cpp
M us_somo/develop/src/us_hydrodyn_misc.cpp
M us_somo/develop/src/us_hydrodyn_other.cpp
M us_somo/develop/src/us_hydrodyn_pat.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_merge.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_util.cpp
M us_somo/develop/src/us_hydrodyn_results.cpp
M us_somo/develop/src/us_hydrodyn_save.cpp
M us_somo/develop/src/us_hydrodyn_saxs.cpp
M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_2d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
A us_somo/develop/src/us_hydrodyn_saxs_buffer_fit.cpp
A us_somo/develop/src/us_hydrodyn_saxs_buffer_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_cormap.cpp
M us_somo/develop/src/us_hydrodyn_saxs_guinier.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_ciq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_bb.cpp
A us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_broaden.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_wheel.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_movie.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_plots.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_svd.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_residuals.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
M us_somo/develop/src/us_hydrodyn_saxs_mw.cpp
M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_screen.cpp
M us_somo/develop/src/us_hydrodyn_script.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
M us_somo/develop/src/us_hydrodyn_supc.cpp
M us_somo/develop/src/us_hydrodyn_util.cpp
M us_somo/develop/src/us_hydrodyn_write.cpp
M us_somo/develop/src/us_hydrodyn_zeno.cpp
M us_somo/develop/src/us_imgviewer.cpp
M us_somo/develop/src/us_json.cpp
M us_somo/develop/src/us_matrix.cpp
M us_somo/develop/src/us_plot_util.cpp
M us_somo/develop/src/us_plot_zoom.cpp
M us_somo/develop/src/us_pm_fitness.cpp
M us_somo/develop/src/us_register.cpp
M us_somo/develop/src/us_saxs_util.cpp
M us_somo/develop/src/us_saxs_util_best.cpp
M us_somo/develop/src/us_saxs_util_guinier.cpp
M us_somo/develop/src/us_saxs_util_hydrate.cpp
M us_somo/develop/src/us_saxs_util_hydrate_align.cpp
M us_somo/develop/src/us_saxs_util_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_grid_atob_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_pat_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_supc_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_zeno_hydro.cpp
M us_somo/develop/src/us_saxs_util_iqq.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d.cpp
M us_somo/develop/src/us_saxs_util_iqq_bead_model.cpp
M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
M us_somo/develop/src/us_saxs_util_loads.cpp
M us_somo/develop/src/us_saxs_util_pat.cpp
M us_somo/develop/src/us_saxs_util_pm.cpp
M us_somo/develop/src/us_saxs_util_static.cpp
M us_somo/develop/src/us_tar.cpp
M us_somo/develop/src/us_util.cpp
M us_somo/develop/src/us_zeno_cxx.cpp
M us_somo/somo/doc/manual/somo/somo-Zeno_optionsNew.png
M us_somo/somo/doc/manual/somo/somo-main0new.png
M us_somo/somo/doc/manual/somo/somo-main4.png
M us_somo/somo/doc/manual/somo/somo.html
A us_somo/somo/doc/manual/somo/somo_ZENO_correction_warning.png
M us_somo/somo/doc/manual/somo/somo_cluster_config.html
M us_somo/somo/doc/manual/somo/somo_hydro_zeno.html
M utils/CMakeLists.txt
A utils/ius_db2.h
M utils/us_ana_profile.cpp
M utils/us_ana_profile.h
M utils/us_analyte.cpp
M utils/us_analyte.h
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_astfem_rsa.cpp
M utils/us_buffer.cpp
M utils/us_buffer.h
M utils/us_cfa_data.cpp
M utils/us_dataIO.cpp
M utils/us_dataIO.h
M utils/us_db2.cpp
M utils/us_db2.h
M utils/us_eprofile.cpp
M utils/us_eprofile.h
M utils/us_hardware.cpp
M utils/us_hardware.h
M utils/us_lamm_astfvm.cpp
M utils/us_model.cpp
M utils/us_model.h
M utils/us_noise.cpp
M utils/us_noise.h
M utils/us_project.cpp
M utils/us_project.h
M utils/us_report.cpp
M utils/us_report.h
M utils/us_rotor.cpp
M utils/us_rotor.h
M utils/us_run_protocol.h
M utils/us_simparms.cpp
M utils/us_simparms.h
M utils/us_solution.cpp
M utils/us_solution.h
M utils/us_solution_vals.cpp
M utils/us_solution_vals.h
M utils/us_solve_sim.cpp
M utils/us_solve_sim.h
M utils/us_time_state.cpp
M utils/us_time_state.h
Log Message:
-----------
merge master into ehb54-issue-553, conflicts manually resolved
Commit: d19407a738880744130ad2ac275bcd672ace631d
https://github.com/ehb54/ultrascan3/commit/d19407a738880744130ad2ac275bcd672ace631d
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-10-15 (Wed, 15 Oct 2025)
Changed paths:
M utils/us_lamm_astfvm.cpp
M utils/us_license_t.cpp
M utils/us_matrix.cpp
M utils/us_pcsa_modelrec.cpp
M utils/us_project.cpp
M utils/us_run_protocol.cpp
M utils/us_solve_sim.cpp
M utils/us_tar.cpp
M utils/us_time_state.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
merge master into ehb54-issue-553, conflicts manually resolved
Commit: b94b4a3819d4ec6a71a8d0f0fbfac37d57b8299e
https://github.com/ehb54/ultrascan3/commit/b94b4a3819d4ec6a71a8d0f0fbfac37d57b8299e
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2025-10-15 (Wed, 15 Oct 2025)
Changed paths:
M gui/us_analysis_base2.cpp
M gui/us_analyte_gui.cpp
M gui/us_data_loader.cpp
M gui/us_extinctfitter_gui.cpp
M gui/us_load_auc.cpp
M gui/us_loadable_noise.cpp
M gui/us_minimize.cpp
M gui/us_model_loader.cpp
M gui/us_noise_loader.cpp
M gui/us_run_details2.cpp
M gui/us_tmst_plot.cpp
M gui/us_window_message.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_astfem_sim/us_clipdata.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_combine_models/us_combine_models.cpp
M programs/us_config/us_color.cpp
M programs/us_convert/us_convert_gui.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_edit/us_edit.cpp
M programs/us_equiltime/us_equiltime.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_export_legacy/us_export.cpp
M programs/us_fematch/us_fematch.cpp
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_manage_data/us_data_model.cpp
M programs/us_manage_data/us_data_tree.cpp
M programs/us_mpi_analysis/2dsa_master.cpp
M programs/us_mpi_analysis/dmga_worker.cpp
M programs/us_mpi_analysis/ga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/pcsa_master.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mpi_analysis/us_mpi_parse.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_spectra/us_mwl_spectra.cpp
M programs/us_mwlr_viewer/us_mwlr_viewer.cpp
M programs/us_rasmol_control/us_rasmol_control.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_spectrum/us_spectrum.cpp
M programs/us_vhw_combine/us_vhw_combine.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M utils/us_lamm_astfvm.cpp
M utils/us_license_t.cpp
M utils/us_matrix.cpp
M utils/us_pcsa_modelrec.cpp
M utils/us_project.cpp
M utils/us_run_protocol.cpp
M utils/us_solve_sim.cpp
M utils/us_tar.cpp
M utils/us_time_state.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge pull request #246 from ehb54/ehb54-issue-533
issue 533 : convert QString::sprintf to asprintf in gui & programs
Commit: 02cbecf79d8b693a2499249cfce28aa7d58abf6b
https://github.com/ehb54/ultrascan3/commit/02cbecf79d8b693a2499249cfce28aa7d58abf6b
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-10-16 (Thu, 16 Oct 2025)
Changed paths:
M utils/us_gzip.cpp
Log Message:
-----------
us_gzip.cpp - remove useless deprecreated 'register' keyword
Commit: bb10991bf7c251763f2aa53737e6574537102d34
https://github.com/ehb54/ultrascan3/commit/bb10991bf7c251763f2aa53737e6574537102d34
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
GMP | R&D: 1. EXP.=> Speeds -- change signals/slot sigs. in spinboxes for speed & acceler....
Commit: b5963153ad855cd97a12fb72e6597d2f2684f421
https://github.com/ehb54/ultrascan3/commit/b5963153ad855cd97a12fb72e6597d2f2684f421
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge pull request #284 from ehb54/alexey-dev-issue592
GMP | R&D: 1. EXP.=> Speeds -- change signals/slot sigs. in spinboxes…
Commit: daee08ef80606ac9f5b82e6e92d3c3319d784081
https://github.com/ehb54/ultrascan3/commit/daee08ef80606ac9f5b82e6e92d3c3319d784081
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_abstractrotor_gui.cpp
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_choice.cpp
M gui/us_csv_loader.cpp
M gui/us_data_loader.cpp
M gui/us_editor.h
M gui/us_editor_gui.cpp
M gui/us_investigator.cpp
M gui/us_license.h
M gui/us_load_auc.cpp
M gui/us_model_gui.cpp
M gui/us_model_loader.cpp
M gui/us_noise_loader.cpp
M gui/us_passwd.h
M gui/us_plot.cpp
M gui/us_plot3d.cpp
M gui/us_predict1.cpp
M gui/us_project_gui.cpp
M gui/us_properties.cpp
M gui/us_resids_bitmap.cpp
M gui/us_rotor_gui.cpp
M gui/us_run_details2.cpp
M gui/us_sassoc.h
M gui/us_select_edits.cpp
M gui/us_select_item.cpp
M gui/us_select_runs.cpp
M gui/us_solution_gui.cpp
M gui/us_table.h
M gui/us_tmst_plot.cpp
M gui/us_widgets.h
M gui/us_widgets_dialog.h
M programs/us/us.h
M programs/us_2dsa/us_adv_analysis_2d.cpp
M programs/us_2dsa/us_analysis_control_2d.cpp
M programs/us_2dsa/us_plot_control_2d.cpp
M programs/us_2dsa/us_resplot_2d.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_astfem_sim/us_clipdata.h
M programs/us_buoyancy/us_buoyancy.cpp
M programs/us_colorgradient/us_colorgradient.h
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_config/us_admin.h
M programs/us_config/us_advanced.h
M programs/us_config/us_color.h
M programs/us_config/us_config.h
M programs/us_config/us_font.h
M programs/us_config/us_xpnhost.h
M programs/us_config/us_xpnhost_db.h
M programs/us_convert/us_experiment_gui.cpp
M programs/us_convert/us_get_run.cpp
M programs/us_convert/us_intensity.cpp
M programs/us_convert/us_select_triples.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_edit/us_edit_scan.cpp
M programs/us_edit/us_exclude_profile.cpp
M programs/us_edit/us_get_edit.cpp
M programs/us_edit/us_ri_noise.cpp
M programs/us_edit/us_select_lambdas.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fematch/us_adv_dmgamc.cpp
M programs/us_fematch/us_advanced_fem.cpp
M programs/us_fematch/us_plot_control_fem.cpp
M programs/us_fematch/us_resplot_fem.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_globalequil/us_eqfit_control.cpp
M programs/us_globalequil/us_eqhistogram.h
M programs/us_globalequil/us_eqmodel_control.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_globalequil/us_long_messagebox.h
M programs/us_globalequil/us_model_adpars.cpp
M programs/us_globalequil/us_model_select.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_mwl_spectra/us_mwls_pltctl.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.cpp
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mlplot.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_plot_control_pc.cpp
M programs/us_pcsa/us_resplot_pc.cpp
M programs/us_pcsa/us_rpscan.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_intensity_ra.cpp
M programs/us_ramp/us_select_triples_ra.cpp
M programs/us_reporter/us_sync_db.cpp
M programs/us_rotor_calibration/us_get_dbexp.cpp
M programs/us_vhw_combine/us_select_runid.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/src/us_hydrodyn.cpp
Log Message:
-----------
Refactor constructor initialization to replace null pointers `(0, 0)` with `nullptr` and explicit `Qt::WindowFlags()` for improved code clarity and modern C++ standards compliance.
Commit: 31ff647d5d67c493fd31589da76c247dae579e47
https://github.com/ehb54/ultrascan3/commit/31ff647d5d67c493fd31589da76c247dae579e47
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_widgets.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_audit_trail_gmp/us_audit_trail_gmp.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_esigner_gmp/us_esigner_gmp.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_vhw_combine/us_select_runid.cpp
Log Message:
-----------
Replace deprecated `QFontMetrics::width()` with `QFontMetrics::horizontalAdvance()` across all affected files for compatibility with Qt 5.11 and above. Streamlines text measurement handling and ensures future proofing.
Commit: d86efe4f3b328918793421ae448d2eb5841785cc
https://github.com/ehb54/ultrascan3/commit/d86efe4f3b328918793421ae448d2eb5841785cc
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_associations_gui.cpp
Log Message:
-----------
Initialize `koligo` to 0 in `us_associations_gui.cpp` to prevent potential usage of an uninitialized variable.
Commit: 7e8e1a176e3f0215069784cf407c928c4c336793
https://github.com/ehb54/ultrascan3/commit/7e8e1a176e3f0215069784cf407c928c4c336793
Author: ehb54 <ehb54 at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M utils/us_gzip.cpp
Log Message:
-----------
Merge pull request #283 from ehb54/ehb54-issue-591
us_gzip.cpp - remove useless deprecreated 'register' keyword
Commit: 233334757bf486df06d554277c1ec4cf0d0310d2
https://github.com/ehb54/ultrascan3/commit/233334757bf486df06d554277c1ec4cf0d0310d2
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_abstractrotor_gui.cpp
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_choice.cpp
M gui/us_csv_loader.cpp
M gui/us_data_loader.cpp
M gui/us_editor.h
M gui/us_editor_gui.cpp
M gui/us_investigator.cpp
M gui/us_license.h
M gui/us_load_auc.cpp
M gui/us_model_gui.cpp
M gui/us_model_loader.cpp
M gui/us_noise_loader.cpp
M gui/us_passwd.h
M gui/us_plot.cpp
M gui/us_plot3d.cpp
M gui/us_predict1.cpp
M gui/us_project_gui.cpp
M gui/us_properties.cpp
M gui/us_resids_bitmap.cpp
M gui/us_rotor_gui.cpp
M gui/us_run_details2.cpp
M gui/us_sassoc.h
M gui/us_select_edits.cpp
M gui/us_select_item.cpp
M gui/us_select_runs.cpp
M gui/us_solution_gui.cpp
M gui/us_table.h
M gui/us_tmst_plot.cpp
M gui/us_widgets.h
M gui/us_widgets_dialog.h
M programs/us/us.h
M programs/us_2dsa/us_adv_analysis_2d.cpp
M programs/us_2dsa/us_analysis_control_2d.cpp
M programs/us_2dsa/us_plot_control_2d.cpp
M programs/us_2dsa/us_resplot_2d.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_astfem_sim/us_clipdata.h
M programs/us_buoyancy/us_buoyancy.cpp
M programs/us_colorgradient/us_colorgradient.h
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_config/us_admin.h
M programs/us_config/us_advanced.h
M programs/us_config/us_color.h
M programs/us_config/us_config.h
M programs/us_config/us_font.h
M programs/us_config/us_xpnhost.h
M programs/us_config/us_xpnhost_db.h
M programs/us_convert/us_experiment_gui.cpp
M programs/us_convert/us_get_run.cpp
M programs/us_convert/us_intensity.cpp
M programs/us_convert/us_select_triples.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_edit/us_edit_scan.cpp
M programs/us_edit/us_exclude_profile.cpp
M programs/us_edit/us_get_edit.cpp
M programs/us_edit/us_ri_noise.cpp
M programs/us_edit/us_select_lambdas.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fematch/us_adv_dmgamc.cpp
M programs/us_fematch/us_advanced_fem.cpp
M programs/us_fematch/us_plot_control_fem.cpp
M programs/us_fematch/us_resplot_fem.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_globalequil/us_eqfit_control.cpp
M programs/us_globalequil/us_eqhistogram.h
M programs/us_globalequil/us_eqmodel_control.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_globalequil/us_long_messagebox.h
M programs/us_globalequil/us_model_adpars.cpp
M programs/us_globalequil/us_model_select.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_mwl_spectra/us_mwls_pltctl.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.cpp
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mlplot.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_plot_control_pc.cpp
M programs/us_pcsa/us_resplot_pc.cpp
M programs/us_pcsa/us_rpscan.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_intensity_ra.cpp
M programs/us_ramp/us_select_triples_ra.cpp
M programs/us_reporter/us_sync_db.cpp
M programs/us_rotor_calibration/us_get_dbexp.cpp
M programs/us_vhw_combine/us_select_runid.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/src/us_hydrodyn.cpp
Log Message:
-----------
Merge pull request #285 from ehb54/lukas/qt6-QFlags
Deal with deprecated QFlags prior Qt6 migration
Commit: 03ea185a14d6a79954e1b261b128dee91df5aeec
https://github.com/ehb54/ultrascan3/commit/03ea185a14d6a79954e1b261b128dee91df5aeec
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_widgets.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_audit_trail_gmp/us_audit_trail_gmp.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_esigner_gmp/us_esigner_gmp.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_vhw_combine/us_select_runid.cpp
Log Message:
-----------
Merge pull request #286 from ehb54/lukas/qt6-width
Replace deprecated QFontMetrics::width() with horizontalAdvance()
Commit: 956516318c816bd92b269c913872f6eb9d952d91
https://github.com/ehb54/ultrascan3/commit/956516318c816bd92b269c913872f6eb9d952d91
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2025-10-17 (Fri, 17 Oct 2025)
Changed paths:
M gui/us_data_loader.cpp
Log Message:
-----------
Merge pull request #279 from ehb54/lukas/static_analysis_warnings
Add null checks before adding child items to make static analysis happy
Commit: 752239a4b3601d73dc40a986b5616f860208f51e
https://github.com/ehb54/ultrascan3/commit/752239a4b3601d73dc40a986b5616f860208f51e
Author: aaron <aaron at aucsolutions.com>
Date: 2025-10-18 (Sat, 18 Oct 2025)
Changed paths:
M gui/CMakeLists.txt
M gui/us_abstractrotor_gui.cpp
M gui/us_analysis_base2.cpp
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_buffer_gui.cpp
M gui/us_choice.cpp
M gui/us_csv_loader.cpp
M gui/us_data_loader.cpp
M gui/us_editor.h
M gui/us_editor_gui.cpp
M gui/us_extinctfitter_gui.cpp
M gui/us_investigator.cpp
M gui/us_license.h
M gui/us_load_auc.cpp
M gui/us_loadable_noise.cpp
M gui/us_minimize.cpp
M gui/us_model_gui.cpp
M gui/us_model_loader.cpp
M gui/us_noise_loader.cpp
M gui/us_passwd.h
M gui/us_plot.cpp
M gui/us_plot3d.cpp
M gui/us_predict1.cpp
M gui/us_project_gui.cpp
M gui/us_properties.cpp
M gui/us_report_gui.cpp
M gui/us_resids_bitmap.cpp
M gui/us_rotor_gui.cpp
M gui/us_run_details2.cpp
M gui/us_sassoc.h
M gui/us_select_edits.cpp
M gui/us_select_item.cpp
M gui/us_select_runs.cpp
M gui/us_solution_gui.cpp
M gui/us_table.h
M gui/us_tmst_plot.cpp
M gui/us_widgets.cpp
M gui/us_widgets.h
M gui/us_widgets_dialog.cpp
M gui/us_widgets_dialog.h
M programs/us/us.h
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_adv_analysis_2d.cpp
M programs/us_2dsa/us_analysis_control_2d.cpp
M programs/us_2dsa/us_plot_control_2d.cpp
M programs/us_2dsa/us_resplot_2d.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_astfem_sim.h
M programs/us_astfem_sim/us_clipdata.cpp
M programs/us_astfem_sim/us_clipdata.h
M programs/us_audit_trail_gmp/us_audit_trail_gmp.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_buoyancy/us_buoyancy.cpp
M programs/us_colorgradient/us_colorgradient.h
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_combine_models/us_combine_models.cpp
M programs/us_config/us_admin.h
M programs/us_config/us_advanced.h
M programs/us_config/us_color.cpp
M programs/us_config/us_color.h
M programs/us_config/us_config.h
M programs/us_config/us_font.h
M programs/us_config/us_xpnhost.h
M programs/us_config/us_xpnhost_db.h
M programs/us_convert/us_convert_gui.cpp
M programs/us_convert/us_experiment_gui.cpp
M programs/us_convert/us_get_run.cpp
M programs/us_convert/us_intensity.cpp
M programs/us_convert/us_select_triples.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit_scan.cpp
M programs/us_edit/us_exclude_profile.cpp
M programs/us_edit/us_get_edit.cpp
M programs/us_edit/us_ri_noise.cpp
M programs/us_edit/us_select_lambdas.cpp
M programs/us_equiltime/us_equiltime.cpp
M programs/us_esigner_gmp/us_esigner_gmp.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_export_legacy/us_export.cpp
M programs/us_fematch/us_adv_dmgamc.cpp
M programs/us_fematch/us_advanced_fem.cpp
M programs/us_fematch/us_fematch.cpp
M programs/us_fematch/us_plot_control_fem.cpp
M programs/us_fematch/us_resplot_fem.cpp
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_solutedata.cpp
M programs/us_globalequil/us_eqfit_control.cpp
M programs/us_globalequil/us_eqhistogram.h
M programs/us_globalequil/us_eqmodel_control.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_globalequil/us_long_messagebox.h
M programs/us_globalequil/us_model_adpars.cpp
M programs/us_globalequil/us_model_select.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_manage_data/us_data_model.cpp
M programs/us_manage_data/us_data_tree.cpp
M programs/us_mpi_analysis/2dsa_master.cpp
M programs/us_mpi_analysis/dmga_worker.cpp
M programs/us_mpi_analysis/ga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/pcsa_master.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mpi_analysis/us_mpi_parse.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_spectra/us_mwl_spectra.cpp
M programs/us_mwl_spectra/us_mwls_pltctl.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.cpp
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_mwlr_viewer/us_mwlr_viewer.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mlplot.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_plot_control_pc.cpp
M programs/us_pcsa/us_resplot_pc.cpp
M programs/us_pcsa/us_rpscan.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_intensity_ra.cpp
M programs/us_ramp/us_select_triples_ra.cpp
M programs/us_reporter/us_sync_db.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_rotor_calibration/us_get_dbexp.cpp
M programs/us_spectrum/us_spectrum.cpp
M programs/us_vhw_combine/us_select_runid.cpp
M programs/us_vhw_combine/us_vhw_combine.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/src/us_hydrodyn.cpp
M utils/us_buffer.cpp
M utils/us_gzip.cpp
M utils/us_lamm_astfvm.cpp
M utils/us_license_t.cpp
M utils/us_matrix.cpp
M utils/us_pcsa_modelrec.cpp
M utils/us_project.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
M utils/us_simparms.cpp
M utils/us_simparms.h
M utils/us_solve_sim.cpp
M utils/us_tar.cpp
M utils/us_time_state.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'origin/master' into 534-enhancement-version-upgrade
# Conflicts:
# gui/us_window_message.cpp
# programs/us_rasmol_control/us_rasmol_control.cpp
Compare: https://github.com/ehb54/ultrascan3/compare/aaeaad6c0276...752239a4b360
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