[us-commits] [ehb54/ultrascan3] 11572c: Update Sphinx build system: include `auto_index.py...
Lukas Dobler
noreply at github.com
Sun Apr 12 04:10:55 MDT 2026
Branch: refs/heads/lukas/us_fematch
Home: https://github.com/ehb54/ultrascan3
Commit: 11572ca66d369080b73f5925c9b46c3b7200c538
https://github.com/ehb54/ultrascan3/commit/11572ca66d369080b73f5925c9b46c3b7200c538
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/source/index.rst
Log Message:
-----------
Update Sphinx build system: include `auto_index.py`, link PDF manual in HTML, and clean PDF on `make clean`.
Commit: e2fbf48c659f3fad2922c9067a43f1b3bdc0ec5e
https://github.com/ehb54/ultrascan3/commit/e2fbf48c659f3fad2922c9067a43f1b3bdc0ec5e
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update LaTeX configuration: set `latex_use_xindy` to False and redefine font settings for better Unicode handling and compatibility.
Commit: f7169d62eaece4fd69dd8f88ab06432a8bb390f0
https://github.com/ehb54/ultrascan3/commit/f7169d62eaece4fd69dd8f88ab06432a8bb390f0
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
A test/utils/test_us_help_pages.cpp
Log Message:
-----------
Add unit test for validating existence of help pages and refactor zoom stack initialization for improved consistency.
Commit: a542b58b077c8629e05993705eb0967c8e2ed720
https://github.com/ehb54/ultrascan3/commit/a542b58b077c8629e05993705eb0967c8e2ed720
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .gitignore
Log Message:
-----------
Update .gitignore to exclude `doc/manual/build`
Commit: 3841b3da9b269c931e61bd8332217ea7edafa5ce
https://github.com/ehb54/ultrascan3/commit/3841b3da9b269c931e61bd8332217ea7edafa5ce
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M utils/CMakeLists.txt
M utils/us_extern.h
Log Message:
-----------
Add static library support: define `US_UTIL_STATIC` and conditionally update `us_extern.h`.
Commit: 8bd5bb513393dabe50c036ffbfe60f96a6b3ca21
https://github.com/ehb54/ultrascan3/commit/8bd5bb513393dabe50c036ffbfe60f96a6b3ca21
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M utils/us_buffer.h
Log Message:
-----------
Initialize `grad_form` flag to `false` in `us_buffer.h`.
Commit: 923260944deb1b79e310ceb98a16effa5b5090ca
https://github.com/ehb54/ultrascan3/commit/923260944deb1b79e310ceb98a16effa5b5090ca
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.h
M gui/us_buffer_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_get_run.h
M gui/us_load_auc.h
M gui/us_model_loader.h
M gui/us_select_triples.h
M gui/us_solution_gui.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
Log Message:
-----------
Update help file paths for improved documentation consistency and organization.
Commit: 78e6d90c9756f558dd3c67e03ec447dbaa996a8a
https://github.com/ehb54/ultrascan3/commit/78e6d90c9756f558dd3c67e03ec447dbaa996a8a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/doc-build.yml
Log Message:
-----------
Let github action only build the documnetaion with the qthelp builder, because latex dependencies are currently missing
Commit: 05eb1370b6158124bcafd398fef77466e66be0aa
https://github.com/ehb54/ultrascan3/commit/05eb1370b6158124bcafd398fef77466e66be0aa
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Remove feature commit in wrong branch
Commit: 3c1312a39ac562248315fb410c301c9d8eab79f5
https://github.com/ehb54/ultrascan3/commit/3c1312a39ac562248315fb410c301c9d8eab79f5
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Merge branch 'main' into lukas/manual_test/make
Commit: 99fc3a66c861b6275cedd397bfd03e34e85d9435
https://github.com/ehb54/ultrascan3/commit/99fc3a66c861b6275cedd397bfd03e34e85d9435
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Add GitHub Actions workflow for Sphinx documentation build
Commit: 5fa677c2afd3175fa29a37165561f4125a867c5d
https://github.com/ehb54/ultrascan3/commit/5fa677c2afd3175fa29a37165561f4125a867c5d
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Refactor Sphinx GitHub Actions workflow: replace deprecated problem matcher usage, streamline build commands, and add error handling.
Commit: b91a5ae2fecdc63970efdf031426e000eff8cc6e
https://github.com/ehb54/ultrascan3/commit/b91a5ae2fecdc63970efdf031426e000eff8cc6e
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A .github/sphinx-matcher.json
Log Message:
-----------
Add Sphinx problem matcher configuration for GitHub Actions
Commit: 45da34200ce91a23a4f1f8d168e7a1ee612b03b5
https://github.com/ehb54/ultrascan3/commit/45da34200ce91a23a4f1f8d168e7a1ee612b03b5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Annotate Sphinx build warnings in GitHub Actions workflow and update qthelp build step for improved error handling.
Commit: f3750319ef93a4a4b5f925ffaa38acd1ebb8f6f5
https://github.com/ehb54/ultrascan3/commit/f3750319ef93a4a4b5f925ffaa38acd1ebb8f6f5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Replace custom Sphinx warning annotation script with `sphinx-doc/github-problem-matcher` for streamlined GitHub Actions workflow.
Commit: bc2b74fbb9b5698c8269f2d6b060ce420ab6697a
https://github.com/ehb54/ultrascan3/commit/bc2b74fbb9b5698c8269f2d6b060ce420ab6697a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
R .github/sphinx-matcher.json
Log Message:
-----------
Remove obsolete Sphinx problem matcher configuration from GitHub Actions.
Commit: 715a3fd86ec9bdb692b3e1fa0ce393a86548c213
https://github.com/ehb54/ultrascan3/commit/715a3fd86ec9bdb692b3e1fa0ce393a86548c213
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
Fix triplicates to triples
Commit: f1b1aba77a1f2da432e6262d842221eb275d2dd0
https://github.com/ehb54/ultrascan3/commit/f1b1aba77a1f2da432e6262d842221eb275d2dd0
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/fe_dmga_adv.png
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
update to latest
Commit: ff98f3a480b918b42a59334bc0506f87b59b5a37
https://github.com/ehb54/ultrascan3/commit/ff98f3a480b918b42a59334bc0506f87b59b5a37
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M programs/us_integral/us_delete_models.h
Log Message:
-----------
first link change - integral
Commit: 584135021b461a9f753c2ac63b2f37df4cd85b0b
https://github.com/ehb54/ultrascan3/commit/584135021b461a9f753c2ac63b2f37df4cd85b0b
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/delseltrip.png
M doc/manual/source/common_dialogs.rst
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.h
Log Message:
-----------
update us_experiment show.help
Commit: 8e3da82ae6b7563f455e97718bb1f335a1c9bfcc
https://github.com/ehb54/ultrascan3/commit/8e3da82ae6b7563f455e97718bb1f335a1c9bfcc
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Standardize terminology: replace "Triplicates" with "Triples" across documentation for clarity and consistency.
Commit: 7128a07267ee0a0fd7913ea221c2cd891b7099a8
https://github.com/ehb54/ultrascan3/commit/7128a07267ee0a0fd7913ea221c2cd891b7099a8
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
Log Message:
-----------
Improve test failure messages: use `ADD_FAILURE_AT` for precise file/line annotation and enhance regex and help file error clarity
Commit: 9cf710938424ec4c02179f22bb8da50b226085c6
https://github.com/ehb54/ultrascan3/commit/9cf710938424ec4c02179f22bb8da50b226085c6
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/unit-tests-v2.yml
M .github/workflows/unit-tests.yml
Log Message:
-----------
Add GoogleTest problem matcher to GitHub Actions workflows for enhanced test failure annotation
Commit: d849477c413c4de8c709970000b9beed563952aa
https://github.com/ehb54/ultrascan3/commit/d849477c413c4de8c709970000b9beed563952aa
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M programs/us_2dsa/us_2dsa.h
M programs/us_config/us_color.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
Log Message:
-----------
unit test link updates
Commit: ba9907ccbb59086289b70ee897744f22b939a693
https://github.com/ehb54/ultrascan3/commit/ba9907ccbb59086289b70ee897744f22b939a693
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/select_prefilt.png
M doc/manual/source/common_dialogs.rst
M gui/us_select_edits.h
M gui/us_select_item.h
M gui/us_select_runs.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_font.cpp
Log Message:
-----------
unit tests help link update
Commit: 9a107befce5878fa969190700c2a2f6ef48ce068
https://github.com/ehb54/ultrascan3/commit/9a107befce5878fa969190700c2a2f6ef48ce068
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/analysprof_general.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/convert.rst
A doc/manual/source/ramp_data.rst
A doc/manual/source/us_administrator.rst
M doc/manual/source/us_edit.rst
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_config/us_advanced.cpp
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_select_lambdas.h
M programs/us_ramp/us_experiment_gui_ra.h
Log Message:
-----------
updates
Commit: 6fe43510daa8d32555c611669eaa32ab11da07ff
https://github.com/ehb54/ultrascan3/commit/6fe43510daa8d32555c611669eaa32ab11da07ff
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
Log Message:
-----------
images
Commit: 290b3ed2436ce1c133fb54567579f869c3e2ea70
https://github.com/ehb54/ultrascan3/commit/290b3ed2436ce1c133fb54567579f869c3e2ea70
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/dens_match.rst
M programs/us_density_match/us_model_params.h
Log Message:
-----------
update link
Commit: 6242d49b69ff170e32c1fd9ada173147b3744e39
https://github.com/ehb54/ultrascan3/commit/6242d49b69ff170e32c1fd9ada173147b3744e39
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/global_equil.rst
M doc/manual/source/us_edit.rst
Log Message:
-----------
update
Commit: 0924fcb4af9a8403c404ace536fffa1cf6209b6f
https://github.com/ehb54/ultrascan3/commit/0924fcb4af9a8403c404ace536fffa1cf6209b6f
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/astfem_sim.rst
M doc/manual/source/index.rst
M doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
M programs/us_astfem_sim/us_clipdata.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_exclude_profile.h
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_pcsa/us_mlplot.h
Log Message:
-----------
unit test
Commit: c8515e182cb1cddab6d51258efd8a99f97c8c667
https://github.com/ehb54/ultrascan3/commit/c8515e182cb1cddab6d51258efd8a99f97c8c667
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M .github/gtest-us.json
Log Message:
-----------
Fix matcher
Commit: ff35eb4d37eed1d9a2fdd2200d69a00adfcdb41c
https://github.com/ehb54/ultrascan3/commit/ff35eb4d37eed1d9a2fdd2200d69a00adfcdb41c
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/index.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/vhw_enhanced.rst
M programs/us_config/us_xpnhost_db.cpp
M programs/us_pcsa/us_mrecs_loader.h
Log Message:
-----------
sphynx links
Commit: 287fbcbd18bec2e702fabfb4298a69a0b62ee537
https://github.com/ehb54/ultrascan3/commit/287fbcbd18bec2e702fabfb4298a69a0b62ee537
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/doc-build.yml
A .github/workflows/sphinx-doc-build.yml
M .github/workflows/unit-tests-v2.yml
M .github/workflows/unit-tests.yml
M .gitignore
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/_static/images/delseltrip.png
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
A doc/manual/source/_static/images/fe_dmga_adv.png
A doc/manual/source/_static/images/select_prefilt.png
A doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
A doc/manual/source/global_equil.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
A doc/manual/source/ramp_data.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
A doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.h
M gui/us_buffer_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_get_run.h
M gui/us_load_auc.h
M gui/us_model_loader.h
M gui/us_select_edits.h
M gui/us_select_item.h
M gui/us_select_runs.h
M gui/us_select_triples.h
M gui/us_solution_gui.h
M programs/us_2dsa/us_2dsa.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_astfem_sim/us_clipdata.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_density_match/us_model_params.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_exclude_profile.h
M programs/us_edit/us_select_lambdas.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.h
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_mlplot.h
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_ramp/us_experiment_gui_ra.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
A test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
M utils/us_buffer.h
M utils/us_extern.h
Log Message:
-----------
Merge pull request #408 from ehb54/lukas/manual_test/make
Enhance documentation build system and improve Unicode handling
Commit: 07c763dfbb9bdc97eed6059ebd746fee626a8ea1
https://github.com/ehb54/ultrascan3/commit/07c763dfbb9bdc97eed6059ebd746fee626a8ea1
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-12 (Sun, 12 Apr 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/doc-build.yml
A .github/workflows/sphinx-doc-build.yml
M .github/workflows/unit-tests-v2.yml
M .github/workflows/unit-tests.yml
M .gitignore
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/_static/images/delseltrip.png
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
A doc/manual/source/_static/images/fe_dmga_adv.png
A doc/manual/source/_static/images/select_prefilt.png
A doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
A doc/manual/source/global_equil.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
A doc/manual/source/ramp_data.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
A doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.h
M gui/us_buffer_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_get_run.h
M gui/us_load_auc.h
M gui/us_model_loader.h
M gui/us_select_edits.h
M gui/us_select_item.h
M gui/us_select_runs.h
M gui/us_select_triples.h
M gui/us_solution_gui.h
M programs/us_2dsa/us_2dsa.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_astfem_sim/us_clipdata.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_density_match/us_model_params.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_exclude_profile.h
M programs/us_edit/us_select_lambdas.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.h
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_mlplot.h
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_ramp/us_experiment_gui_ra.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
A test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
M utils/us_buffer.h
M utils/us_extern.h
Log Message:
-----------
Merge branch 'main' into lukas/us_fematch
Compare: https://github.com/ehb54/ultrascan3/compare/560ad0332594...07c763dfbb9b
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