[us-commits] [ehb54/ultrascan3] 37703a: somo qt6 branch - initial commit from somo-dev
emre brookes
noreply at github.com
Wed Jul 1 20:44:48 MDT 2026
Branch: refs/heads/issue-941
Home: https://github.com/ehb54/ultrascan3
Commit: 37703a8dfbfa2d698e212c71fa75af7e0fa4cd82
https://github.com/ehb54/ultrascan3/commit/37703a8dfbfa2d698e212c71fa75af7e0fa4cd82
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-15 (Mon, 15 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/include/us3i_gui_util.h
M us_somo/develop/include/us3i_plot.h
M us_somo/develop/include/us_csv.h
M us_somo/develop/include/us_hydrodyn_cluster.h
M us_somo/develop/include/us_hydrodyn_cluster_best.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb_nsa.h
M us_somo/develop/include/us_hydrodyn_cluster_dammin.h
M us_somo/develop/include/us_hydrodyn_cluster_oned.h
M us_somo/develop/include/us_hydrodyn_saxs.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_fit.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_options.h
M us_somo/develop/include/us_json.h
M us_somo/develop/include/us_multi_column.h
M us_somo/develop/include/us_pdb_util.h
M us_somo/develop/include/us_saxs_cmds_t.h
M us_somo/develop/include/us_saxs_util.h
M us_somo/develop/include/us_vector.h
M us_somo/develop/include/us_zeno_cxx.h
M us_somo/develop/include/us_zeno_cxx_nf.h
M us_somo/develop/src/qwt/scrollbar.cpp
M us_somo/develop/src/us3i_color.cpp
M us_somo/develop/src/us3i_gui_util.cpp
M us_somo/develop/src/us3i_gzip.cpp
M us_somo/develop/src/us3i_plot.cpp
M us_somo/develop/src/us3i_settings.cpp
M us_somo/develop/src/us_band_broaden.cpp
M us_somo/develop/src/us_config.cpp
M us_somo/develop/src/us_dirhist.cpp
M us_somo/develop/src/us_editor.cpp
M us_somo/develop/src/us_file_util.cpp
M us_somo/develop/src/us_gzip.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_addatom.cpp
M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
M us_somo/develop/src/us_hydrodyn_addresidue.cpp
M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
M us_somo/develop/src/us_hydrodyn_anaflex_core.cpp
M us_somo/develop/src/us_hydrodyn_batch.cpp
M us_somo/develop/src/us_hydrodyn_bd.cpp
M us_somo/develop/src/us_hydrodyn_bd_core.cpp
M us_somo/develop/src/us_hydrodyn_beads.cpp
M us_somo/develop/src/us_hydrodyn_beads_load.cpp
M us_somo/develop/src/us_hydrodyn_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster.cpp
M us_somo/develop/src/us_hydrodyn_cluster_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb_nsa.cpp
M us_somo/develop/src/us_hydrodyn_cluster_config.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dammin.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dmd.cpp
M us_somo/develop/src/us_hydrodyn_cluster_oned.cpp
M us_somo/develop/src/us_hydrodyn_cluster_results.cpp
M us_somo/develop/src/us_hydrodyn_cluster_status.cpp
M us_somo/develop/src/us_hydrodyn_cluster_submit.cpp
M us_somo/develop/src/us_hydrodyn_comparative.cpp
M us_somo/develop/src/us_hydrodyn_core.cpp
M us_somo/develop/src/us_hydrodyn_csv_viewer.cpp
M us_somo/develop/src/us_hydrodyn_dad.cpp
M us_somo/develop/src/us_hydrodyn_dad_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_dad_dctr.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_dad_gg.cpp
M us_somo/develop/src/us_hydrodyn_dad_gui.cpp
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_dad_options.cpp
M us_somo/develop/src/us_hydrodyn_dad_parameters.cpp
M us_somo/develop/src/us_hydrodyn_dad_svd.cpp
M us_somo/develop/src/us_hydrodyn_dad_util.cpp
M us_somo/develop/src/us_hydrodyn_dmd_core.cpp
M us_somo/develop/src/us_hydrodyn_grpy.cpp
M us_somo/develop/src/us_hydrodyn_hydrate.cpp
M us_somo/develop/src/us_hydrodyn_info.cpp
M us_somo/develop/src/us_hydrodyn_load.cpp
M us_somo/develop/src/us_hydrodyn_mals.cpp
M us_somo/develop/src/us_hydrodyn_mals_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_util.cpp
M us_somo/develop/src/us_hydrodyn_mals_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_util.cpp
M us_somo/develop/src/us_hydrodyn_other.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_merge.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_util.cpp
M us_somo/develop/src/us_hydrodyn_save.cpp
M us_somo/develop/src/us_hydrodyn_saxs.cpp
M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_2d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_cormap.cpp
M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
M us_somo/develop/src/us_hydrodyn_saxs_guinier.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_dctr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_broaden.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_movie.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_parameters.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_svd.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
M us_somo/develop/src/us_hydrodyn_saxs_legend.cpp
M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
M us_somo/develop/src/us_hydrodyn_saxs_mw.cpp
M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_screen.cpp
M us_somo/develop/src/us_hydrodyn_saxs_search.cpp
M us_somo/develop/src/us_hydrodyn_script.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
M us_somo/develop/src/us_hydrodyn_supc.cpp
M us_somo/develop/src/us_hydrodyn_write.cpp
M us_somo/develop/src/us_hydrodyn_zeno.cpp
M us_somo/develop/src/us_json.cpp
M us_somo/develop/src/us_mqt.cpp
M us_somo/develop/src/us_pdb_util.cpp
M us_somo/develop/src/us_plot_util.cpp
M us_somo/develop/src/us_pm.cpp
M us_somo/develop/src/us_pm_test.cpp
M us_somo/develop/src/us_saxs_util.cpp
M us_somo/develop/src/us_saxs_util_best.cpp
M us_somo/develop/src/us_saxs_util_dmd.cpp
M us_somo/develop/src/us_saxs_util_extern.cpp
M us_somo/develop/src/us_saxs_util_hydrate.cpp
M us_somo/develop/src/us_saxs_util_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_supc_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_zeno_hydro.cpp
M us_somo/develop/src/us_saxs_util_iqq.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d_mpi.cpp
M us_somo/develop/src/us_saxs_util_iqq_bead_model.cpp
M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
M us_somo/develop/src/us_saxs_util_loads.cpp
M us_somo/develop/src/us_saxs_util_mpi.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga_mpi.cpp
M us_somo/develop/src/us_saxs_util_pm.cpp
M us_somo/develop/src/us_saxs_util_static.cpp
M us_somo/develop/src/us_tar.cpp
M us_somo/develop/us3_hydrodyn/main.cpp
M us_somo/develop/us_saxs_cmds_mpi/us_saxs_cmds_mpi.pro
M us_somo/develop/us_saxs_cmds_t/main.cpp
Log Message:
-----------
somo qt6 branch - initial commit from somo-dev
Commit: 9cc80a805f0c89d30fd663cffa4e544bdccfddd6
https://github.com/ehb54/ultrascan3/commit/9cc80a805f0c89d30fd663cffa4e544bdccfddd6
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
Log Message:
-----------
codeql debug info
Commit: 8f49d1cadd471936ba76ad95fe0001436a3685a7
https://github.com/ehb54/ultrascan3/commit/8f49d1cadd471936ba76ad95fe0001436a3685a7
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M us_somo/develop/libus_somo.pro
Log Message:
-----------
remove us_color from libus_somo
Commit: 642330d0e7562d863f6471b57e528cdf5aec013c
https://github.com/ehb54/ultrascan3/commit/642330d0e7562d863f6471b57e528cdf5aec013c
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
M admin/codeql/docker/local.pri.somo
Log Message:
-----------
additional debugs, temp relax deprecations
Commit: fcd5db1f23ea8d24dfda6dcb66c321e1e670bef4
https://github.com/ehb54/ultrascan3/commit/fcd5db1f23ea8d24dfda6dcb66c321e1e670bef4
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
Log Message:
-----------
additional debugs, temp relax deprecations
Commit: 1a808d5061ef553acf0aa97a83c04af9d82970bc
https://github.com/ehb54/ultrascan3/commit/1a808d5061ef553acf0aa97a83c04af9d82970bc
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
Log Message:
-----------
additional debugs, temp relax deprecations
Commit: 24783d42d61d7132dd5622e8027c9f6f59de5608
https://github.com/ehb54/ultrascan3/commit/24783d42d61d7132dd5622e8027c9f6f59de5608
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
M admin/codeql/docker/local.pri.somo
Log Message:
-----------
restore deprecations
Commit: c37b59afbb01c067585c5da09c200e295282decc
https://github.com/ehb54/ultrascan3/commit/c37b59afbb01c067585c5da09c200e295282decc
Author: ehb54 <ehb54 at users.noreply.github.com>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge branch 'main' into somo-qt6
Commit: 59ba4be5192bd4024037ed7173a13061a59c41ce
https://github.com/ehb54/ultrascan3/commit/59ba4be5192bd4024037ed7173a13061a59c41ce
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M .github/workflows/codeql-analysis.yml
Log Message:
-----------
codeql fix
Commit: cfd59439653a91b6cdcfd88d8a348ccb934a6cba
https://github.com/ehb54/ultrascan3/commit/cfd59439653a91b6cdcfd88d8a348ccb934a6cba
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M utils/us_xpn_data.cpp
Log Message:
-----------
somo qt6 branch - initial commit from somo-dev
Commit: 46434a20d02da7dd7cb8edb14455747838aae8e4
https://github.com/ehb54/ultrascan3/commit/46434a20d02da7dd7cb8edb14455747838aae8e4
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-16 (Tue, 16 Dec 2025)
Changed paths:
M admin/codeql/docker/local.pri.somo
Log Message:
-----------
relax somo error for test
Commit: 4bafd3f55ff93229f51bcd4cd0ece35195af707c
https://github.com/ehb54/ultrascan3/commit/4bafd3f55ff93229f51bcd4cd0ece35195af707c
Author: ehb54 <ehb54 at users.noreply.github.com>
Date: 2025-12-17 (Wed, 17 Dec 2025)
Changed paths:
M admin/codeql/docker/local.pri.somo
Log Message:
-----------
Update compiler flags and defines in local.pri.somo
Commit: a7e3fd4276bf018f3e37d73c4e11598037b8d409
https://github.com/ehb54/ultrascan3/commit/a7e3fd4276bf018f3e37d73c4e11598037b8d409
Author: ehb54 <brookes at uthscsa.edu>
Date: 2025-12-17 (Wed, 17 Dec 2025)
Changed paths:
M us_somo/develop/src/us_dirhist.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
Log Message:
-----------
somo datetime dirhist fix
Commit: 34d3536c8fd88c19ef2ecf8c3a1d440cfc915abf
https://github.com/ehb54/ultrascan3/commit/34d3536c8fd88c19ef2ecf8c3a1d440cfc915abf
Author: ehb54 <ehb54 at users.noreply.github.com>
Date: 2025-12-17 (Wed, 17 Dec 2025)
Changed paths:
M admin/codeql/docker/local.pri.somo
Log Message:
-----------
Clean up deprecated warning flags in local.pri.somo
Removed deprecated warning definitions for Qt.
Commit: 87377fece32656c6472a465a06493b17084169fe
https://github.com/ehb54/ultrascan3/commit/87377fece32656c6472a465a06493b17084169fe
Author: ehb54 <ehb54 at users.noreply.github.com>
Date: 2025-12-17 (Wed, 17 Dec 2025)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M programs/us/CMakeLists.txt
M programs/us/us.cpp
M scripts/build.sh
Log Message:
-----------
Merge branch 'main' into somo-qt6
Commit: 8886d756072fc33f5d8db65458bae9bd00574c52
https://github.com/ehb54/ultrascan3/commit/8886d756072fc33f5d8db65458bae9bd00574c52
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-01-19 (Mon, 19 Jan 2026)
Changed paths:
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
Log Message:
-----------
somo qt6 compat regex bugfix
Commit: 6fc2e4866baf59178b492f7e345fb36de180ebd8
https://github.com/ehb54/ultrascan3/commit/6fc2e4866baf59178b492f7e345fb36de180ebd8
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-07-01 (Wed, 01 Jul 2026)
Changed paths:
A .github/gtest-us.json
A .github/workflows/bump-version.yml
M .github/workflows/codeql-analysis.yml
M .github/workflows/doc-build.yml
A .github/workflows/sphinx-doc-build.yml
M .github/workflows/unit-tests-v2.yml
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
R README.linguist
M README.manual
A VERSION
M admin/cmake/FindQwt.cmake
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-osx-dynamic.cmake
A admin/cmake/triplets/arm64-windows.cmake
A admin/cmake/triplets/x64-mingw-dynamic.cmake
M admin/cmake/triplets/x64-osx-dynamic.cmake
M admin/release/linux.pl
R alpha/srcdevel
R alpha/us.cpp
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
A buildsys/vcpkg/overlay-ports/qt5-multimedia/drop-wmf-plugin.patch
A buildsys/vcpkg/overlay-ports/qt5-multimedia/portfile.cmake
A buildsys/vcpkg/overlay-ports/qt5-multimedia/vcpkg.json
A buildsys/vcpkg/overlay-ports/qt5-tools/fix-pkgconfig-qt5uiplugin-not-found.patch
A buildsys/vcpkg/overlay-ports/qt5-tools/fix-spawnvp-argv.patch
A buildsys/vcpkg/overlay-ports/qt5-tools/libclang.patch
A buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qt5-tools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
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A doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page-abde.rst
A doc/manual/source/start_page-dm.rst
A doc/manual/source/start_page-int.rst
A doc/manual/source/start_page-mw.rst
A doc/manual/source/start_page-new.rst
A doc/manual/source/start_page-rpt.rst
A doc/manual/source/start_page.rst
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_administrator.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M etc/etc_belongs_list.txt
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui.pri
M gui/CMakeLists.txt
M gui/fix-mac-make.sh
R gui/images.qrc
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M gui/libus_gui.pro
M gui/qrc_make_adds.txt
M gui/us_abstractrotor_gui.h
M gui/us_analysis_base2.cpp
M gui/us_analysis_base2.h
M gui/us_analyte_gui.cpp
M gui/us_analyte_gui.h
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M gui/us_csv_loader.cpp
M gui/us_csv_loader.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_extinctfitter_gui.cpp
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M gui/us_get_run.cpp
M gui/us_get_run.h
M gui/us_gui_util.cpp
M gui/us_help.cpp
M gui/us_images.cpp
M gui/us_images.h
M gui/us_intensity.h
M gui/us_investigator.cpp
M gui/us_license.cpp
M gui/us_load_auc.h
M gui/us_minimize.cpp
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_model_loader.cpp
M gui/us_model_loader.h
M gui/us_mwl_data.cpp
M gui/us_new_spectrum.cpp
M gui/us_new_spectrum.h
M gui/us_passwd.cpp
M gui/us_plot.cpp
M gui/us_plot.h
M gui/us_plot3d.cpp
M gui/us_plot3d.h
M gui/us_predict1.cpp
M gui/us_predict1.h
M gui/us_project_gui.h
M gui/us_properties.cpp
M gui/us_report_gui.cpp
M gui/us_report_gui.h
M gui/us_rotor_gui.h
M gui/us_run_details2.cpp
M gui/us_sassoc.cpp
M gui/us_sassoc.h
M gui/us_select_edits.h
M gui/us_select_item.cpp
M gui/us_select_item.h
M gui/us_select_runs.h
M gui/us_select_triples.h
M gui/us_selectbox.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M gui/us_spectrodata.cpp
M gui/us_spectrodata.h
M gui/us_widgets.h
M local.pri.template
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/main1.inc
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_2dsa.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_2dsa/us_show_norm.cpp
M programs/us_abde/us_abde_main.cpp
M programs/us_abde/us_norm_profile.cpp
M programs/us_abde/us_norm_profile.h
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_clipdata.h
M programs/us_audit_trail_gmp/us_audit_trail_gmp.cpp
M programs/us_autoflow_analysis/CMakeLists.txt
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.h
M programs/us_buoyancy/us_buoyancy.cpp
M programs/us_buoyancy/us_buoyancy.h
M programs/us_colorgradient/us_colorgradient.cpp
M programs/us_com_project/CMakeLists.txt
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_com_project_academic/CMakeLists.txt
M programs/us_combine_models/us_combine_models.cpp
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_config.pro
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_font.h
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_dcdt/us_dcdt.cpp
M programs/us_dcdt/us_dcdt.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_density_match/us_density_match.cpp
M programs/us_density_match/us_model_params.h
M programs/us_density_match/us_remove_models.h
M programs/us_dmga_init/us_dmga_init.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_edit/us_edit_scan.cpp
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_exclude_profile.h
M programs/us_edit/us_select_lambdas.h
M programs/us_esigner_gmp/us_esigner_gmp.cpp
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_export_legacy/us_export.cpp
M programs/us_fds_filemanager/us_fds_filemanager.cpp
M programs/us_fematch/CMakeLists.txt
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.cpp
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.cpp
M programs/us_fematch/us_plot_control_fem.h
M programs/us_fit_meniscus/CMakeLists.txt
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_fit_meniscus/us_fit_meniscus.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_globalequil/us_eqfit_control.cpp
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqhistogram.cpp
M programs/us_globalequil/us_eqmath.cpp
M programs/us_globalequil/us_eqmodel_control.cpp
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_eqreporter.cpp
M programs/us_globalequil/us_fit_worker.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_globalequil/us_globalequil.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_grid_editor/us_grid_editor.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_manage_data/us_data_model.cpp
M programs/us_manage_data/us_manage_data.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mwl_species_fit/CMakeLists.txt
M programs/us_mwl_species_fit/us_mwl_sf_plot3d.cpp
M programs/us_mwl_species_fit/us_mwl_sf_plot3d.h
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.cpp
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.cpp
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwl_pltctrl.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.cpp
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_mlplot.cpp
M programs/us_pcsa/us_mlplot.h
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_pcsa_process.cpp
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.cpp
M programs/us_pcsa/us_rpscan.h
M programs/us_protocol_dev/CMakeLists.txt
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_pseudo_absorbance/us_add_refScan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
M programs/us_pseudo_absorbance/us_pseudo_absorbance.cpp
M programs/us_pseudo_absorbance/us_remove_ri.cpp
M programs/us_pseudo_absorbance/us_remove_ri.h
M programs/us_query_rmsd/CMakeLists.txt
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_experiment_gui_ra.h
M programs/us_ramp/us_experiment_ra.cpp
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_mwlramp.cpp
M programs/us_ramp/us_ramp.cpp
M programs/us_ramp/us_ramp_gui.cpp
M programs/us_ramp/us_ramp_gui.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/CMakeLists.txt
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_rotor_calibration/us_rotor_calibration.cpp
M programs/us_rotor_calibration/us_rotor_calibration.h
M programs/us_second_moment/us_second_moment.cpp
M programs/us_second_moment/us_second_moment.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
M programs/us_vhw_combine/us_vhw_combine.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.h
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.h
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.h
R propignore
R proppng
R proptext
M qmakeall.sh
M qwtplot3d/CMakeLists.txt
M qwtplot3d/include/qwt3d_io_gl2ps.h
M qwtplot3d/include/qwt3d_openglhelper.h
M qwtplot3d/include/qwt3d_plot.h
M qwtplot3d/include/qwt3d_surfaceplot.h
R qwtplot3d/lingua_de.ts
M qwtplot3d/qwtplot3d.pro
M qwtplot3d/src/qwt3d_io.cpp
M qwtplot3d/src/qwt3d_io_gl2ps.cpp
M qwtplot3d/src/qwt3d_label.cpp
M qwtplot3d/src/qwt3d_lighting.cpp
M qwtplot3d/src/qwt3d_movements.cpp
M qwtplot3d/src/qwt3d_plot.cpp
M qwtplot3d/src/qwt3d_surfaceplot.cpp
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
M test/utils/CMakeLists.txt
M test/utils/test_us_ana_profile.cpp
M test/utils/test_us_crypto.cpp
A test/utils/test_us_help_pages.cpp
A test/utils/test_us_regex.cpp
M test/utils/test_us_simparms.cpp
M test/utils/test_us_time_state.cpp
A us-build
M utils/CMakeLists.txt
M utils/ius_db2.h
M utils/libus_utils.pro
M utils/us_ana_profile.cpp
M utils/us_ana_profile.h
M utils/us_analyte.cpp
M utils/us_analyte.h
M utils/us_archive.cpp
M utils/us_archive.h
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_astfem_rsa.cpp
M utils/us_astfem_rsa.h
M utils/us_buffer.cpp
M utils/us_buffer.h
M utils/us_cfa_data.cpp
M utils/us_cfa_data.h
M utils/us_constants.cpp
M utils/us_constants.h
M utils/us_convert.cpp
M utils/us_convert.h
M utils/us_convertio.cpp
M utils/us_convertio.h
M utils/us_crc.cpp
M utils/us_crc.h
M utils/us_crypto.cpp
M utils/us_crypto.h
M utils/us_csv_data.cpp
M utils/us_csv_data.h
M utils/us_dataIO.cpp
M utils/us_dataIO.h
M utils/us_datafiles.cpp
M utils/us_datafiles.h
M utils/us_db2.cpp
M utils/us_db2.h
M utils/us_defines.h
M utils/us_dmga_constr.cpp
M utils/us_eprofile.h
M utils/us_experiment.cpp
M utils/us_experiment.h
M utils/us_extern.h
M utils/us_geturl.cpp
M utils/us_geturl.h
M utils/us_global.cpp
M utils/us_global.h
M utils/us_gzip.cpp
M utils/us_gzip.h
M utils/us_hardware.h
M utils/us_http_post.h
M utils/us_hydrosim.cpp
M utils/us_hydrosim.h
M utils/us_lamm_astfvm.cpp
M utils/us_lamm_astfvm.h
M utils/us_license_t.cpp
M utils/us_license_t.h
M utils/us_link_ssl.cpp
M utils/us_link_ssl.h
M utils/us_lm.cpp
M utils/us_local_server.cpp
M utils/us_local_server.h
M utils/us_math2.cpp
M utils/us_math2.h
M utils/us_matrix.cpp
M utils/us_matrix.h
M utils/us_memory.cpp
M utils/us_memory.h
M utils/us_model.cpp
M utils/us_model.h
M utils/us_noise.cpp
M utils/us_noise.h
M utils/us_pcsa_modelrec.cpp
M utils/us_pcsa_modelrec.h
M utils/us_project.cpp
M utils/us_protocol_util.cpp
M utils/us_protocol_util.h
M utils/us_report.cpp
M utils/us_report.h
M utils/us_report_gmp.cpp
M utils/us_rotor.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
M utils/us_settings.cpp
M utils/us_settings.h
M utils/us_simparms.cpp
M utils/us_simparms.h
M utils/us_sleep.h
M utils/us_solute.cpp
M utils/us_solute.h
M utils/us_solution.cpp
M utils/us_solution.h
M utils/us_solution_vals.h
M utils/us_solve_sim.cpp
M utils/us_stiffbase.cpp
M utils/us_stiffbase.h
M utils/us_tar.cpp
M utils/us_tar.h
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_timer.cpp
M utils/us_timer.h
M utils/us_util.cpp
M utils/us_util.h
A utils/us_utils_qt.h
M utils/us_vector.cpp
M utils/us_vector.h
M utils/us_xpn_data.cpp
M utils/us_xpn_data.h
M utils/us_zsolute.cpp
M utils/us_zsolute.h
R vcpkg
M vcpkg.json
Log Message:
-----------
Merge pull request #469 from ehb54/main
Merge main into somo-qt6
Commit: 005210ec1222cf2098477fef7cbc62cdfdb1c08b
https://github.com/ehb54/ultrascan3/commit/005210ec1222cf2098477fef7cbc62cdfdb1c08b
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-07-01 (Wed, 01 Jul 2026)
Changed paths:
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/src/us3i_gui_util.cpp
M us_somo/develop/src/us_config.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_addresidue.cpp
M us_somo/develop/src/us_hydrodyn_anaflex_core.cpp
M us_somo/develop/src/us_hydrodyn_bd_core.cpp
M us_somo/develop/src/us_hydrodyn_beads_load.cpp
M us_somo/develop/src/us_hydrodyn_best.cpp
Log Message:
-----------
Address PR #335 review feedback from doluk
- Qt::WFlags -> Qt::WindowFlags (lightingdlgbase.h)
- inline the const-wrapper save_svg overload (us3i_gui_util.cpp)
- drop dead Qt3/4 QT_VERSION include guard (us_config.cpp)
- hoist repeated regex construction to static const in
fileNameCheck (us_hydrodyn.cpp), anaflex txt-extension checks
(us_hydrodyn_anaflex_core.cpp), and the leading-'=' strip in
US_Hydrodyn_Best::load (us_hydrodyn_best.cpp)
- move QRegularExpression include next to other Qt includes and
simplify rx_spaces construction (us_hydrodyn_addresidue.cpp)
- remove duplicate QRegularExpression include (us_hydrodyn_bd_core.cpp)
- combine QRegularExpression rx construction with its pattern and
drop the now-redundant setPattern call (us_hydrodyn_beads_load.cpp)
Commit: 4dd383414126596486f0a9d7f4a2594aa26cbbb2
https://github.com/ehb54/ultrascan3/commit/4dd383414126596486f0a9d7f4a2594aa26cbbb2
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-07-01 (Wed, 01 Jul 2026)
Changed paths:
M utils/us_db2.cpp
Log Message:
-----------
Merge branch 'main' into somo-qt6
Commit: 67350cbc9b652fe2183c4a6889631191739a5cdb
https://github.com/ehb54/ultrascan3/commit/67350cbc9b652fe2183c4a6889631191739a5cdb
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-07-01 (Wed, 01 Jul 2026)
Changed paths:
M .github/workflows/codeql-analysis.yml
M admin/codeql/docker/local.pri.somo
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/include/us3i_gui_util.h
M us_somo/develop/include/us3i_plot.h
M us_somo/develop/include/us_csv.h
M us_somo/develop/include/us_hydrodyn_cluster.h
M us_somo/develop/include/us_hydrodyn_cluster_best.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb_nsa.h
M us_somo/develop/include/us_hydrodyn_cluster_dammin.h
M us_somo/develop/include/us_hydrodyn_cluster_oned.h
M us_somo/develop/include/us_hydrodyn_saxs.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_fit.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_options.h
M us_somo/develop/include/us_json.h
M us_somo/develop/include/us_multi_column.h
M us_somo/develop/include/us_pdb_util.h
M us_somo/develop/include/us_saxs_cmds_t.h
M us_somo/develop/include/us_saxs_util.h
M us_somo/develop/include/us_vector.h
M us_somo/develop/include/us_zeno_cxx.h
M us_somo/develop/include/us_zeno_cxx_nf.h
M us_somo/develop/libus_somo.pro
M us_somo/develop/src/qwt/scrollbar.cpp
M us_somo/develop/src/us3i_color.cpp
M us_somo/develop/src/us3i_gui_util.cpp
M us_somo/develop/src/us3i_gzip.cpp
M us_somo/develop/src/us3i_plot.cpp
M us_somo/develop/src/us3i_settings.cpp
M us_somo/develop/src/us_band_broaden.cpp
M us_somo/develop/src/us_config.cpp
M us_somo/develop/src/us_dirhist.cpp
M us_somo/develop/src/us_editor.cpp
M us_somo/develop/src/us_file_util.cpp
M us_somo/develop/src/us_gzip.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_addatom.cpp
M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
M us_somo/develop/src/us_hydrodyn_addresidue.cpp
M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
M us_somo/develop/src/us_hydrodyn_anaflex_core.cpp
M us_somo/develop/src/us_hydrodyn_batch.cpp
M us_somo/develop/src/us_hydrodyn_bd.cpp
M us_somo/develop/src/us_hydrodyn_bd_core.cpp
M us_somo/develop/src/us_hydrodyn_beads.cpp
M us_somo/develop/src/us_hydrodyn_beads_load.cpp
M us_somo/develop/src/us_hydrodyn_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster.cpp
M us_somo/develop/src/us_hydrodyn_cluster_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb_nsa.cpp
M us_somo/develop/src/us_hydrodyn_cluster_config.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dammin.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dmd.cpp
M us_somo/develop/src/us_hydrodyn_cluster_oned.cpp
M us_somo/develop/src/us_hydrodyn_cluster_results.cpp
M us_somo/develop/src/us_hydrodyn_cluster_status.cpp
M us_somo/develop/src/us_hydrodyn_cluster_submit.cpp
M us_somo/develop/src/us_hydrodyn_comparative.cpp
M us_somo/develop/src/us_hydrodyn_core.cpp
M us_somo/develop/src/us_hydrodyn_csv_viewer.cpp
M us_somo/develop/src/us_hydrodyn_dad.cpp
M us_somo/develop/src/us_hydrodyn_dad_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_dad_dctr.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_dad_gg.cpp
M us_somo/develop/src/us_hydrodyn_dad_gui.cpp
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_dad_options.cpp
M us_somo/develop/src/us_hydrodyn_dad_parameters.cpp
M us_somo/develop/src/us_hydrodyn_dad_svd.cpp
M us_somo/develop/src/us_hydrodyn_dad_util.cpp
M us_somo/develop/src/us_hydrodyn_dmd_core.cpp
M us_somo/develop/src/us_hydrodyn_grpy.cpp
M us_somo/develop/src/us_hydrodyn_hydrate.cpp
M us_somo/develop/src/us_hydrodyn_info.cpp
M us_somo/develop/src/us_hydrodyn_load.cpp
M us_somo/develop/src/us_hydrodyn_mals.cpp
M us_somo/develop/src/us_hydrodyn_mals_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_util.cpp
M us_somo/develop/src/us_hydrodyn_mals_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_util.cpp
M us_somo/develop/src/us_hydrodyn_other.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_merge.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_util.cpp
M us_somo/develop/src/us_hydrodyn_save.cpp
M us_somo/develop/src/us_hydrodyn_saxs.cpp
M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_2d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_cormap.cpp
M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
M us_somo/develop/src/us_hydrodyn_saxs_guinier.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_dctr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_broaden.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_movie.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_parameters.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_svd.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
M us_somo/develop/src/us_hydrodyn_saxs_legend.cpp
M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
M us_somo/develop/src/us_hydrodyn_saxs_mw.cpp
M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_screen.cpp
M us_somo/develop/src/us_hydrodyn_saxs_search.cpp
M us_somo/develop/src/us_hydrodyn_script.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
M us_somo/develop/src/us_hydrodyn_supc.cpp
M us_somo/develop/src/us_hydrodyn_write.cpp
M us_somo/develop/src/us_hydrodyn_zeno.cpp
M us_somo/develop/src/us_json.cpp
M us_somo/develop/src/us_mqt.cpp
M us_somo/develop/src/us_pdb_util.cpp
M us_somo/develop/src/us_plot_util.cpp
M us_somo/develop/src/us_pm.cpp
M us_somo/develop/src/us_pm_test.cpp
M us_somo/develop/src/us_saxs_util.cpp
M us_somo/develop/src/us_saxs_util_best.cpp
M us_somo/develop/src/us_saxs_util_dmd.cpp
M us_somo/develop/src/us_saxs_util_extern.cpp
M us_somo/develop/src/us_saxs_util_hydrate.cpp
M us_somo/develop/src/us_saxs_util_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_supc_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_zeno_hydro.cpp
M us_somo/develop/src/us_saxs_util_iqq.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d_mpi.cpp
M us_somo/develop/src/us_saxs_util_iqq_bead_model.cpp
M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
M us_somo/develop/src/us_saxs_util_loads.cpp
M us_somo/develop/src/us_saxs_util_mpi.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga_mpi.cpp
M us_somo/develop/src/us_saxs_util_pm.cpp
M us_somo/develop/src/us_saxs_util_static.cpp
M us_somo/develop/src/us_tar.cpp
M us_somo/develop/us3_hydrodyn/main.cpp
M us_somo/develop/us_saxs_cmds_mpi/us_saxs_cmds_mpi.pro
M us_somo/develop/us_saxs_cmds_t/main.cpp
Log Message:
-----------
Merge pull request #335 from ehb54/somo-qt6
somo qt6 branch - initial commit from somo-dev
Commit: 5924b0fe87a290c4e598e447b28d84cdc4780865
https://github.com/ehb54/ultrascan3/commit/5924b0fe87a290c4e598e447b28d84cdc4780865
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-07-01 (Wed, 01 Jul 2026)
Changed paths:
M .github/workflows/codeql-analysis.yml
M admin/codeql/docker/local.pri.somo
M us_somo/develop/3dplot/lightingdlgbase.h
M us_somo/develop/include/us3i_gui_util.h
M us_somo/develop/include/us3i_plot.h
M us_somo/develop/include/us_csv.h
M us_somo/develop/include/us_hydrodyn_cluster.h
M us_somo/develop/include/us_hydrodyn_cluster_best.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb.h
M us_somo/develop/include/us_hydrodyn_cluster_bfnb_nsa.h
M us_somo/develop/include/us_hydrodyn_cluster_dammin.h
M us_somo/develop/include/us_hydrodyn_cluster_oned.h
M us_somo/develop/include/us_hydrodyn_saxs.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_fit.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc_options.h
M us_somo/develop/include/us_json.h
M us_somo/develop/include/us_multi_column.h
M us_somo/develop/include/us_pdb_util.h
M us_somo/develop/include/us_saxs_cmds_t.h
M us_somo/develop/include/us_saxs_util.h
M us_somo/develop/include/us_vector.h
M us_somo/develop/include/us_zeno_cxx.h
M us_somo/develop/include/us_zeno_cxx_nf.h
M us_somo/develop/libus_somo.pro
M us_somo/develop/src/qwt/scrollbar.cpp
M us_somo/develop/src/us3i_color.cpp
M us_somo/develop/src/us3i_gui_util.cpp
M us_somo/develop/src/us3i_gzip.cpp
M us_somo/develop/src/us3i_plot.cpp
M us_somo/develop/src/us3i_settings.cpp
M us_somo/develop/src/us_band_broaden.cpp
M us_somo/develop/src/us_config.cpp
M us_somo/develop/src/us_dirhist.cpp
M us_somo/develop/src/us_editor.cpp
M us_somo/develop/src/us_file_util.cpp
M us_somo/develop/src/us_gzip.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_addatom.cpp
M us_somo/develop/src/us_hydrodyn_addhybrid.cpp
M us_somo/develop/src/us_hydrodyn_addresidue.cpp
M us_somo/develop/src/us_hydrodyn_addsaxs.cpp
M us_somo/develop/src/us_hydrodyn_anaflex_core.cpp
M us_somo/develop/src/us_hydrodyn_batch.cpp
M us_somo/develop/src/us_hydrodyn_bd.cpp
M us_somo/develop/src/us_hydrodyn_bd_core.cpp
M us_somo/develop/src/us_hydrodyn_beads.cpp
M us_somo/develop/src/us_hydrodyn_beads_load.cpp
M us_somo/develop/src/us_hydrodyn_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster.cpp
M us_somo/develop/src/us_hydrodyn_cluster_best.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb.cpp
M us_somo/develop/src/us_hydrodyn_cluster_bfnb_nsa.cpp
M us_somo/develop/src/us_hydrodyn_cluster_config.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dammin.cpp
M us_somo/develop/src/us_hydrodyn_cluster_dmd.cpp
M us_somo/develop/src/us_hydrodyn_cluster_oned.cpp
M us_somo/develop/src/us_hydrodyn_cluster_results.cpp
M us_somo/develop/src/us_hydrodyn_cluster_status.cpp
M us_somo/develop/src/us_hydrodyn_cluster_submit.cpp
M us_somo/develop/src/us_hydrodyn_comparative.cpp
M us_somo/develop/src/us_hydrodyn_core.cpp
M us_somo/develop/src/us_hydrodyn_csv_viewer.cpp
M us_somo/develop/src/us_hydrodyn_dad.cpp
M us_somo/develop/src/us_hydrodyn_dad_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_dad_dctr.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_dad_gg.cpp
M us_somo/develop/src/us_hydrodyn_dad_gui.cpp
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_dad_options.cpp
M us_somo/develop/src/us_hydrodyn_dad_parameters.cpp
M us_somo/develop/src/us_hydrodyn_dad_svd.cpp
M us_somo/develop/src/us_hydrodyn_dad_util.cpp
M us_somo/develop/src/us_hydrodyn_dmd_core.cpp
M us_somo/develop/src/us_hydrodyn_grpy.cpp
M us_somo/develop/src/us_hydrodyn_hydrate.cpp
M us_somo/develop/src/us_hydrodyn_info.cpp
M us_somo/develop/src/us_hydrodyn_load.cpp
M us_somo/develop/src/us_hydrodyn_mals.cpp
M us_somo/develop/src/us_hydrodyn_mals_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_dctr.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gg.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_gui.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_parameters.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_util.cpp
M us_somo/develop/src/us_hydrodyn_mals_svd.cpp
M us_somo/develop/src/us_hydrodyn_mals_util.cpp
M us_somo/develop/src/us_hydrodyn_other.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_merge.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool_util.cpp
M us_somo/develop/src/us_hydrodyn_save.cpp
M us_somo/develop/src/us_hydrodyn_saxs.cpp
M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_2d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_cormap.cpp
M us_somo/develop/src/us_hydrodyn_saxs_external.cpp
M us_somo/develop/src/us_hydrodyn_saxs_fits.cpp
M us_somo/develop/src/us_hydrodyn_saxs_guinier.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_baseline_best.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_dctr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_fit_global.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gg.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_bb.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes_broaden.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_movie.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_nth.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_parameters.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_svd.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_bead_model.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_iqq_sh.cpp
M us_somo/develop/src/us_hydrodyn_saxs_legend.cpp
M us_somo/develop/src/us_hydrodyn_saxs_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
M us_somo/develop/src/us_hydrodyn_saxs_mw.cpp
M us_somo/develop/src/us_hydrodyn_saxs_plots.cpp
M us_somo/develop/src/us_hydrodyn_saxs_pr.cpp
M us_somo/develop/src/us_hydrodyn_saxs_screen.cpp
M us_somo/develop/src/us_hydrodyn_saxs_search.cpp
M us_somo/develop/src/us_hydrodyn_script.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
M us_somo/develop/src/us_hydrodyn_supc.cpp
M us_somo/develop/src/us_hydrodyn_write.cpp
M us_somo/develop/src/us_hydrodyn_zeno.cpp
M us_somo/develop/src/us_json.cpp
M us_somo/develop/src/us_mqt.cpp
M us_somo/develop/src/us_pdb_util.cpp
M us_somo/develop/src/us_plot_util.cpp
M us_somo/develop/src/us_pm.cpp
M us_somo/develop/src/us_pm_test.cpp
M us_somo/develop/src/us_saxs_util.cpp
M us_somo/develop/src/us_saxs_util_best.cpp
M us_somo/develop/src/us_saxs_util_dmd.cpp
M us_somo/develop/src/us_saxs_util_extern.cpp
M us_somo/develop/src/us_saxs_util_hydrate.cpp
M us_somo/develop/src/us_saxs_util_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_supc_hydro.cpp
M us_somo/develop/src/us_saxs_util_hydro_zeno_hydro.cpp
M us_somo/develop/src/us_saxs_util_iqq.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d.cpp
M us_somo/develop/src/us_saxs_util_iqq_1d_mpi.cpp
M us_somo/develop/src/us_saxs_util_iqq_bead_model.cpp
M us_somo/develop/src/us_saxs_util_iqq_pdb.cpp
M us_somo/develop/src/us_saxs_util_loads.cpp
M us_somo/develop/src/us_saxs_util_mpi.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga.cpp
M us_somo/develop/src/us_saxs_util_nsa_ga_mpi.cpp
M us_somo/develop/src/us_saxs_util_pm.cpp
M us_somo/develop/src/us_saxs_util_static.cpp
M us_somo/develop/src/us_tar.cpp
M us_somo/develop/us3_hydrodyn/main.cpp
M us_somo/develop/us_saxs_cmds_mpi/us_saxs_cmds_mpi.pro
M us_somo/develop/us_saxs_cmds_t/main.cpp
Log Message:
-----------
Merge branch 'main' into issue-941
Compare: https://github.com/ehb54/ultrascan3/compare/73d10e1ac251...5924b0fe87a2
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