[us-commits] [ehb54/ultrascan3] 254289: ACAB doubled
emre brookes
noreply at github.com
Thu Jun 18 14:28:11 MDT 2026
Branch: refs/heads/ehb54-issue-766
Home: https://github.com/ehb54/ultrascan3
Commit: 2542899201e17dd085de687f6fdfe671fa123bdb
https://github.com/ehb54/ultrascan3/commit/2542899201e17dd085de687f6fdfe671fa123bdb
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-01-22 (Thu, 22 Jan 2026)
Changed paths:
A doc/manual/source/#Makefile#
A doc/manual/source/2dsa/2dsa_adv.rst
A doc/manual/source/2dsa/2dsa_analys.rst
A doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/2dsa/index.rst
A doc/manual/source/3d_plot.rst
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/custom.css
A doc/manual/source/_static/images/2dsa_3dplot.png
A doc/manual/source/_static/images/2dsa_advan.png
A doc/manual/source/_static/images/2dsa_analvv.png
A doc/manual/source/_static/images/2dsa_analys.png
A doc/manual/source/_static/images/2dsa_main-c.png
A doc/manual/source/_static/images/2dsa_main-o.png
A doc/manual/source/_static/images/2dsa_resplot.png
A doc/manual/source/_static/images/D20W_bar.png
A doc/manual/source/_static/images/MW-bar.png
A doc/manual/source/_static/images/RINplot.png
A doc/manual/source/_static/images/TINplot.png
A doc/manual/source/_static/images/UltraScan-logo.png
A doc/manual/source/_static/images/add_RIN-TIN.png
A doc/manual/source/_static/images/add_RIN.png
A doc/manual/source/_static/images/add_TIN.png
A doc/manual/source/_static/images/advanced_config.png
A doc/manual/source/_static/images/analyte_details.png
A doc/manual/source/_static/images/analyte_edit.png
A doc/manual/source/_static/images/analyte_edit_spec.png
A doc/manual/source/_static/images/analyte_new_sequence.png
A doc/manual/source/_static/images/analyte_newc.png
A doc/manual/source/_static/images/analyte_newd.png
A doc/manual/source/_static/images/analyte_newp.png
A doc/manual/source/_static/images/analyte_selectc.png
A doc/manual/source/_static/images/analyte_selectd.png
A doc/manual/source/_static/images/analyte_selectp.png
A doc/manual/source/_static/images/analyte_sequence.png
A doc/manual/source/_static/images/analyte_settings.png
A doc/manual/source/_static/images/analyte_spec-gui.png
A doc/manual/source/_static/images/analyte_specmenu.png
A doc/manual/source/_static/images/analyte_spectrum.png
A doc/manual/source/_static/images/analytes.png
A doc/manual/source/_static/images/associations.png
A doc/manual/source/_static/images/astfem_sim.png
A doc/manual/source/_static/images/bitmap.png
A doc/manual/source/_static/images/buffer_edit.png
A doc/manual/source/_static/images/buffer_edit_setting.png
A doc/manual/source/_static/images/buffer_edit_spectrum.png
A doc/manual/source/_static/images/buffer_info.png
A doc/manual/source/_static/images/buffer_manage_spectrum.png
A doc/manual/source/_static/images/buffer_new.png
A doc/manual/source/_static/images/buffer_new_spectrum.png
A doc/manual/source/_static/images/buffer_select.png
A doc/manual/source/_static/images/buffer_settings.png
A doc/manual/source/_static/images/buffer_spectrum.png
A doc/manual/source/_static/images/cfa_view-loadauc.png
A doc/manual/source/_static/images/cfa_view-loadraw.png
A doc/manual/source/_static/images/cfa_view-main.png
A doc/manual/source/_static/images/cfa_view-statsauc.png
A doc/manual/source/_static/images/cfa_view-statsraw.png
A doc/manual/source/_static/images/color-1.png
A doc/manual/source/_static/images/color-2.png
A doc/manual/source/_static/images/color-a.png
A doc/manual/source/_static/images/color-b.png
A doc/manual/source/_static/images/colorgrad1.png
A doc/manual/source/_static/images/colorgradient/col1_colgen.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/_static/images/colorgradient/col2_colgen.png
A doc/manual/source/_static/images/colorgradient/colorgrad.png
A doc/manual/source/_static/images/colorgradient/colorgradient_main.png
A doc/manual/source/_static/images/colorgradient/components.png
A doc/manual/source/_static/images/colorgradient/model_editor.png
A doc/manual/source/_static/images/combine_models-idedit.png
A doc/manual/source/_static/images/combine_models-save.png
A doc/manual/source/_static/images/combine_models.png
A doc/manual/source/_static/images/components.png
A doc/manual/source/_static/images/config.png
A doc/manual/source/_static/images/config1.png
A doc/manual/source/_static/images/config2.png
A doc/manual/source/_static/images/config_plot.png
A doc/manual/source/_static/images/convert-RIdata.png
A doc/manual/source/_static/images/convert-exclude.png
A doc/manual/source/_static/images/convert-experiment.png
A doc/manual/source/_static/images/convert-mwl.png
A doc/manual/source/_static/images/convert-seltrip.png
A doc/manual/source/_static/images/convert-subset.png
A doc/manual/source/_static/images/convert-tolerance.png
A doc/manual/source/_static/images/convert.png
A doc/manual/source/_static/images/custom_grid-1.png
A doc/manual/source/_static/images/custom_grid.png
A doc/manual/source/_static/images/data_converter.png
A doc/manual/source/_static/images/data_loader-edits.png
A doc/manual/source/_static/images/data_loader-trips.png
A doc/manual/source/_static/images/data_loader.png
A doc/manual/source/_static/images/database.png
A doc/manual/source/_static/images/ddist_combine-selrun.png
A doc/manual/source/_static/images/ddist_combine.png
A doc/manual/source/_static/images/densmatch_main.png
A doc/manual/source/_static/images/densmatch_mpars_completed.png
A doc/manual/source/_static/images/densmatch_mpars_empty.png
A doc/manual/source/_static/images/densmatch_rmvmodels.png
A doc/manual/source/_static/images/edit_buffer_spec_menu.png
A doc/manual/source/_static/images/eq1-mean.png
A doc/manual/source/_static/images/eq2-skew.png
A doc/manual/source/_static/images/eq3-kurtosis.png
A doc/manual/source/_static/images/eq4-moments.png
A doc/manual/source/_static/images/eq5-variance.png
A doc/manual/source/_static/images/eq6-stddev.png
A doc/manual/source/_static/images/eq7-probsigma.png
A doc/manual/source/_static/images/eq8-confidence.png
A doc/manual/source/_static/images/experiment_cells.png
A doc/manual/source/_static/images/experiment_general.png
A doc/manual/source/_static/images/experiment_optics.png
A doc/manual/source/_static/images/experiment_overview.png
A doc/manual/source/_static/images/experiment_photomult.png
A doc/manual/source/_static/images/experiment_range.png
A doc/manual/source/_static/images/experiment_range_details.png
A doc/manual/source/_static/images/experiment_range_selector.png
A doc/manual/source/_static/images/experiment_range_selmanual.png
A doc/manual/source/_static/images/experiment_rotor.png
A doc/manual/source/_static/images/experiment_solutions.png
A doc/manual/source/_static/images/experiment_solutions_comments.png
A doc/manual/source/_static/images/experiment_speeds.png
A doc/manual/source/_static/images/experiment_submit.png
A doc/manual/source/_static/images/experiment_submit_details
A doc/manual/source/_static/images/experiment_upload.png
A doc/manual/source/_static/images/export_leg_1.png
A doc/manual/source/_static/images/export_leg_RA.png
A doc/manual/source/_static/images/export_leg_RI.png
A doc/manual/source/_static/images/export_leg_auc.png
A doc/manual/source/_static/images/export_leg_beck.png
A doc/manual/source/_static/images/export_legacy.png
A doc/manual/source/_static/images/fe_load_data.png
A doc/manual/source/_static/images/fe_load_model_distrib.png
A doc/manual/source/_static/images/fe_match.png
A doc/manual/source/_static/images/fe_match_3dplot.png
A doc/manual/source/_static/images/fe_match_adv.png
A doc/manual/source/_static/images/fe_match_all.png
A doc/manual/source/_static/images/fe_match_allct.png
A doc/manual/source/_static/images/fe_match_lddat1.png
A doc/manual/source/_static/images/fe_match_lddat2.png
A doc/manual/source/_static/images/fe_match_lddat3.png
A doc/manual/source/_static/images/fe_match_lddat4.png
A doc/manual/source/_static/images/fe_match_ra.png
A doc/manual/source/_static/images/fe_match_resplot.png
A doc/manual/source/_static/images/fe_match_sim1.png
A doc/manual/source/_static/images/fe_match_sim2.png
A doc/manual/source/_static/images/fe_match_sim3_1b.png
A doc/manual/source/_static/images/fe_match_sim3_1p.png
A doc/manual/source/_static/images/fe_match_sim3_2b.png
A doc/manual/source/_static/images/fe_match_sim3_2p.png
A doc/manual/source/_static/images/fe_match_sim3_3b.png
A doc/manual/source/_static/images/fe_match_sim3_4b.png
A doc/manual/source/_static/images/fe_match_sim3_5b.png
A doc/manual/source/_static/images/fe_match_sim3_5p.png
A doc/manual/source/_static/images/fe_match_sim3_6b.png
A doc/manual/source/_static/images/fe_match_sim3_7b.png
A doc/manual/source/_static/images/fe_match_sim3_8b.png
A doc/manual/source/_static/images/fe_match_sim4.png
A doc/manual/source/_static/images/fe_match_sim5.png
A doc/manual/source/_static/images/fe_match_sim6.png
A doc/manual/source/_static/images/fe_match_sim7.png
A doc/manual/source/_static/images/fe_match_simulated.png
A doc/manual/source/_static/images/fe_match_viewer.png
A doc/manual/source/_static/images/fe_sim-1.png
A doc/manual/source/_static/images/fe_sim-2.png
A doc/manual/source/_static/images/fit_men-editupd.png
A doc/manual/source/_static/images/fit_men-load.png
A doc/manual/source/_static/images/fit_men_bot.png
A doc/manual/source/_static/images/fit_meniscus.png
A doc/manual/source/_static/images/ga_initialize-o.png
A doc/manual/source/_static/images/ga_initialize-p.png
A doc/manual/source/_static/images/ga_initialize.png
A doc/manual/source/_static/images/ga_report-1.png
A doc/manual/source/_static/images/ga_report-2.png
A doc/manual/source/_static/images/ga_report-3.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/_static/images/gmp/automation/2dsa.png
A doc/manual/source/_static/images/gmp/automation/2dsa_it.png
A doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
A doc/manual/source/_static/images/gmp/automation/Aprofile.png
A doc/manual/source/_static/images/gmp/automation/analysis.png
A doc/manual/source/_static/images/gmp/automation/auto_edit.png
A doc/manual/source/_static/images/gmp/automation/bitmap.png
A doc/manual/source/_static/images/gmp/automation/cells.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/_static/images/gmp/automation/lims.png
A doc/manual/source/_static/images/gmp/automation/main_window.png
A doc/manual/source/_static/images/gmp/automation/man_edit.png
A doc/manual/source/_static/images/gmp/automation/optics.png
A doc/manual/source/_static/images/gmp/automation/pcsa.png
A doc/manual/source/_static/images/gmp/automation/pcsa_report.png
A doc/manual/source/_static/images/gmp/automation/plot.png
A doc/manual/source/_static/images/gmp/automation/ranges.png
A doc/manual/source/_static/images/gmp/automation/report_editor.png
A doc/manual/source/_static/images/gmp/automation/rotor.png
A doc/manual/source/_static/images/gmp/automation/solutions.png
A doc/manual/source/_static/images/gmp/automation/speed.png
A doc/manual/source/_static/images/gmp/automation/submit.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/_static/images/gmp/gmp.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_01.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_02.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_03.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_04.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_05.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_06.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_07.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_08.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_09.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_10.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_11.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_12.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_13.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_14.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_15.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_16.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_17.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_18.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_19.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_20.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_21.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_22.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_23.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_24.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_25.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_26.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_27.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_28.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_29.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_30.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_31.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_32.png
A doc/manual/source/_static/images/gmp/protocol_development/protocol_development_33.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/_static/images/gmp/vhw_distribution.png
A doc/manual/source/_static/images/grid_editor.png
A doc/manual/source/_static/images/grid_editor_multi_grids.png
A doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
A doc/manual/source/_static/images/grid_editor_mw_view.png
A doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid1-good.png
A doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid2-good.png
A doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid3-good.png
A doc/manual/source/_static/images/hori_cs.png
A doc/manual/source/_static/images/idist_comb_selPre.png
A doc/manual/source/_static/images/idist_comb_seldis.png
A doc/manual/source/_static/images/idist_combine.png
A doc/manual/source/_static/images/incr_sigmoid.png
A doc/manual/source/_static/images/load_auc-search.png
A doc/manual/source/_static/images/load_auc-trips.png
A doc/manual/source/_static/images/load_auc.png
A doc/manual/source/_static/images/load_colormap.png
A doc/manual/source/_static/images/load_model_dis-MID.png
A doc/manual/source/_static/images/load_model_distrib.png
A doc/manual/source/_static/images/load_noise.png
A doc/manual/source/_static/images/load_noise_details.png
A doc/manual/source/_static/images/manage_data.png
A doc/manual/source/_static/images/manage_data_bhide.png
A doc/manual/source/_static/images/manage_data_bshow.png
A doc/manual/source/_static/images/manage_data_cmenu-1.png
A doc/manual/source/_static/images/manage_data_cmenu-2.png
A doc/manual/source/_static/images/manage_data_conf.png
A doc/manual/source/_static/images/manage_data_exp.png
A doc/manual/source/_static/images/manage_data_pasw.png
A doc/manual/source/_static/images/manage_data_sync.png
A doc/manual/source/_static/images/manage_data_thelp-1.png
A doc/manual/source/_static/images/manage_data_thelp-2.png
A doc/manual/source/_static/images/master-pw.png
A doc/manual/source/_static/images/model_editor.png
A doc/manual/source/_static/images/mwlr_view_3dplot.png
A doc/manual/source/_static/images/mwlr_view_load.png
A doc/manual/source/_static/images/mwlr_view_pltctrl.png
A doc/manual/source/_static/images/mwlr_viewer.png
A doc/manual/source/_static/images/mwlr_viewer_3d.png
A doc/manual/source/_static/images/mwlr_viewer_ctl.png
A doc/manual/source/_static/images/mwlr_viewer_wvl.png
A doc/manual/source/_static/images/mwlr_viewer_xwavl.png
A doc/manual/source/_static/images/noise_prompt.png
A doc/manual/source/_static/images/noise_vec_db.png
A doc/manual/source/_static/images/norm_gridplot.png
A doc/manual/source/_static/images/optima_config_edit.png
A doc/manual/source/_static/images/optima_config_new.png
A doc/manual/source/_static/images/optima_host_config.png
A doc/manual/source/_static/images/pcsa.png
A doc/manual/source/_static/images/pcsa_3dplot.png
A doc/manual/source/_static/images/pcsa_adv_control.png
A doc/manual/source/_static/images/pcsa_all.png
A doc/manual/source/_static/images/pcsa_analys-line.png
A doc/manual/source/_static/images/pcsa_analys-sigm.png
A doc/manual/source/_static/images/pcsa_bitmap.png
A doc/manual/source/_static/images/pcsa_controls_simulated.png
A doc/manual/source/_static/images/pcsa_main-c.png
A doc/manual/source/_static/images/pcsa_mline_sigm.png
A doc/manual/source/_static/images/pcsa_mline_str.png
A doc/manual/source/_static/images/pcsa_mline_unsim.png
A doc/manual/source/_static/images/pcsa_mlines-line1.png
A doc/manual/source/_static/images/pcsa_mlines-line2.png
A doc/manual/source/_static/images/pcsa_mlines-sigm1.png
A doc/manual/source/_static/images/pcsa_mlines-sigm2.png
A doc/manual/source/_static/images/pcsa_regul.png
A doc/manual/source/_static/images/pcsa_regul_sim.png
A doc/manual/source/_static/images/pcsa_report.png
A doc/manual/source/_static/images/pcsa_res_viewer.png
A doc/manual/source/_static/images/pcsa_resplot.png
A doc/manual/source/_static/images/pcsa_rpscan-auto.png
A doc/manual/source/_static/images/pcsa_rpscan-select.png
A doc/manual/source/_static/images/pcsa_rpscan.png
A doc/manual/source/_static/images/pcsa_rpscan_sim.png
A doc/manual/source/_static/images/pcsa_sigmoid_eq.png
A doc/manual/source/_static/images/pcsa_simulated.png
A doc/manual/source/_static/images/pline_dsig.png
A doc/manual/source/_static/images/pline_power.png
A doc/manual/source/_static/images/pline_stline.png
A doc/manual/source/_static/images/plot_controls.png
A doc/manual/source/_static/images/predict1.png
A doc/manual/source/_static/images/predict2-1.png
A doc/manual/source/_static/images/predict2.png
A doc/manual/source/_static/images/print.png
A doc/manual/source/_static/images/process_crash.png
A doc/manual/source/_static/images/process_crash2.png
A doc/manual/source/_static/images/pseudo3d_comb_rmv.png
A doc/manual/source/_static/images/pseudo3d_combine.png
A doc/manual/source/_static/images/register.png
A doc/manual/source/_static/images/report.png
A doc/manual/source/_static/images/reporter-cmenu.png
A doc/manual/source/_static/images/reporter-details.png
A doc/manual/source/_static/images/reporter-loadprof.png
A doc/manual/source/_static/images/reporter-save.png
A doc/manual/source/_static/images/reporter-saveprof.png
A doc/manual/source/_static/images/reporter-view.png
A doc/manual/source/_static/images/reporter-viewitem.png
A doc/manual/source/_static/images/reporter.png
A doc/manual/source/_static/images/residualplot.png
A doc/manual/source/_static/images/residuals.png
A doc/manual/source/_static/images/rmsd_query-c.png
A doc/manual/source/_static/images/rmsd_query-o.png
A doc/manual/source/_static/images/rotor-add.png
A doc/manual/source/_static/images/rotor-save-calibration.png
A doc/manual/source/_static/images/rotor.png
A doc/manual/source/_static/images/rotorstretch-0.png
A doc/manual/source/_static/images/rotorstretch-1.png
A doc/manual/source/_static/images/rotorstretch-2.png
A doc/manual/source/_static/images/rotorstretch-3.png
A doc/manual/source/_static/images/rotorstretch-4.png
A doc/manual/source/_static/images/rotorstretch-5.png
A doc/manual/source/_static/images/rotorstretch-6.png
A doc/manual/source/_static/images/rotorstretch-7.png
A doc/manual/source/_static/images/rotorstretch_report.png
A doc/manual/source/_static/images/run_details.png
A doc/manual/source/_static/images/s20W_bar.png
A doc/manual/source/_static/images/sassoc.png
A doc/manual/source/_static/images/save_colormap.png
A doc/manual/source/_static/images/second_moment.png
A doc/manual/source/_static/images/select_edits.png
A doc/manual/source/_static/images/select_runs.png
A doc/manual/source/_static/images/sequence.png
A doc/manual/source/_static/images/simparams.png
A doc/manual/source/_static/images/simulatedReport.png
A doc/manual/source/_static/images/solution_edit.png
A doc/manual/source/_static/images/solution_new.png
A doc/manual/source/_static/images/solution_select.png
A doc/manual/source/_static/images/solution_settings.png
A doc/manual/source/_static/images/somo/somo_icon.png
A doc/manual/source/_static/images/spectrum_extinction.png
A doc/manual/source/_static/images/sw_spectrum.png
A doc/manual/source/_static/images/time_derivative.png
A doc/manual/source/_static/images/timestate-0.png
A doc/manual/source/_static/images/timestate-1.png
A doc/manual/source/_static/images/timestate-2.png
A doc/manual/source/_static/images/timestate-3.png
A doc/manual/source/_static/images/timestate-4.png
A doc/manual/source/_static/images/ultra.xpm
A doc/manual/source/_static/images/ultrascan3.png
A doc/manual/source/_static/images/upload_fit_spectrum.png
A doc/manual/source/_static/images/us_buffer.png
A doc/manual/source/_static/images/us_buffer_spect.png
A doc/manual/source/_static/images/us_conv-RA.png
A doc/manual/source/_static/images/us_convert/us_convert_01.png
A doc/manual/source/_static/images/us_convert/us_convert_02.png
A doc/manual/source/_static/images/us_convert/us_convert_03.png
A doc/manual/source/_static/images/us_convert/us_convert_04.png
A doc/manual/source/_static/images/us_convert/us_convert_05.png
A doc/manual/source/_static/images/us_convert/us_convert_06.png
A doc/manual/source/_static/images/us_convert/us_convert_07.png
A doc/manual/source/_static/images/us_convert/us_convert_08.png
A doc/manual/source/_static/images/us_convert/us_convert_09.png
A doc/manual/source/_static/images/us_convert/us_convert_10.png
A doc/manual/source/_static/images/us_convert/us_convert_11.png
A doc/manual/source/_static/images/us_convert/us_convert_12.png
A doc/manual/source/_static/images/us_convert/us_convert_13.png
A doc/manual/source/_static/images/us_convert/us_convert_14.png
A doc/manual/source/_static/images/us_convert_01.png
A doc/manual/source/_static/images/us_convert_02.png
A doc/manual/source/_static/images/us_convert_03.png
A doc/manual/source/_static/images/us_convert_04.png
A doc/manual/source/_static/images/us_convert_05.png
A doc/manual/source/_static/images/us_convert_06.png
A doc/manual/source/_static/images/us_convert_07.png
A doc/manual/source/_static/images/us_convert_08.png
A doc/manual/source/_static/images/us_convert_09.png
A doc/manual/source/_static/images/us_convert_10.png
A doc/manual/source/_static/images/us_convert_11.png
A doc/manual/source/_static/images/us_convert_12.png
A doc/manual/source/_static/images/us_convert_13.png
A doc/manual/source/_static/images/us_convert_14.png
A doc/manual/source/_static/images/us_convert_definedscans.png
A doc/manual/source/_static/images/us_convert_definesubset.png
A doc/manual/source/_static/images/us_edit.png
A doc/manual/source/_static/images/us_edit_mwl.png
A doc/manual/source/_static/images/us_equiltime.png
A doc/manual/source/_static/images/us_extinction-0.png
A doc/manual/source/_static/images/us_extinction-00.png
A doc/manual/source/_static/images/us_extinction-000.png
A doc/manual/source/_static/images/us_extinction-1.png
A doc/manual/source/_static/images/us_extinction-2.png
A doc/manual/source/_static/images/us_extinction-3.png
A doc/manual/source/_static/images/us_fds_filemanager-0.png
A doc/manual/source/_static/images/us_fds_filemanager-1.png
A doc/manual/source/_static/images/us_fds_filemanager-2.png
A doc/manual/source/_static/images/us_fds_filemanager-3.png
A doc/manual/source/_static/images/us_fds_filemanager-4.png
A doc/manual/source/_static/images/us_investigator-2.png
A doc/manual/source/_static/images/us_investigator.png
A doc/manual/source/_static/images/us_modelmetrics-0.png
A doc/manual/source/_static/images/us_modmet_report.png
A doc/manual/source/_static/images/us_project.png
A doc/manual/source/_static/images/us_project1.png
A doc/manual/source/_static/images/us_project2.png
A doc/manual/source/_static/images/us_project3.png
A doc/manual/source/_static/images/us_project_add-supdata.png
A doc/manual/source/_static/images/us_project_edit-supdata.png
A doc/manual/source/_static/images/us_project_web.png
A doc/manual/source/_static/images/us_project_webed.png
A doc/manual/source/_static/images/us_solution1.png
A doc/manual/source/_static/images/us_solution2.png
A doc/manual/source/_static/images/us_solution3.png
A doc/manual/source/_static/images/us_spectrum-0.png
A doc/manual/source/_static/images/us_spectrum-1.png
A doc/manual/source/_static/images/us_spectrum-load.png
A doc/manual/source/_static/images/usfont-1.png
A doc/manual/source/_static/images/usfont-2.png
A doc/manual/source/_static/images/vhw_combine-combo.png
A doc/manual/source/_static/images/vhw_combine-envel.png
A doc/manual/source/_static/images/vhw_combine-selrun.png
A doc/manual/source/_static/images/vhw_combine.png
A doc/manual/source/_static/images/vhw_distribution.png
A doc/manual/source/_static/images/vhw_enh_groups.png
A doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/_static/images/vhw_enh_groups_res.png
A doc/manual/source/_static/images/vhw_enhanced.png
A doc/manual/source/_static/images/vhw_histogram.png
A doc/manual/source/_static/language_data.js
A doc/manual/source/_static/sphinx_highlight.js
A doc/manual/source/analyte/analyte_edit.rst
A doc/manual/source/analyte/analyte_new.rst
A doc/manual/source/analyte/analyte_select.rst
A doc/manual/source/analyte/analyte_settings.rst
A doc/manual/source/analyte/index.rst
A doc/manual/source/associations.rst
A doc/manual/source/astfem_sim.rst
A doc/manual/source/beckman_openauc.rst
A doc/manual/source/buffer/buffer_edit.rst
A doc/manual/source/buffer/buffer_new.rst
A doc/manual/source/buffer/buffer_select.rst
A doc/manual/source/buffer/buffer_settings.rst
A doc/manual/source/buffer/index.rst
A doc/manual/source/buoyancy_editor.rst
A doc/manual/source/colorgradient.rst
A doc/manual/source/combine_models.rst
A doc/manual/source/common_dialogs.rst
A doc/manual/source/components.rst
A doc/manual/source/conf.py
A doc/manual/source/conf.py-orig.081225
A doc/manual/source/config.rst
A doc/manual/source/convert.rst
A doc/manual/source/ddist_combine.rst
A doc/manual/source/dens_match.rst
A doc/manual/source/dmga_init.rst
A doc/manual/source/dmga_init_constr.rst
A doc/manual/source/experiment/cells.rst
A doc/manual/source/experiment/general.rst
A doc/manual/source/experiment/import.rst
A doc/manual/source/experiment/index.rst
A doc/manual/source/experiment/liveupdate.rst
A doc/manual/source/experiment/optics.rst
A doc/manual/source/experiment/range.rst
A doc/manual/source/experiment/rotor.rst
A doc/manual/source/experiment/solutions.rst
A doc/manual/source/experiment/speeds.rst
A doc/manual/source/experiment/submit.rst
A doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_match_adv.rst
A doc/manual/source/fe_match/fe_match_main.rst
A doc/manual/source/fe_match/fe_match_simulate.rst
A doc/manual/source/fe_match/index.rst
A doc/manual/source/fit_meniscus.rst
A doc/manual/source/ga_initialize.rst
A doc/manual/source/gmp/gmp.rst
A doc/manual/source/gmp/gmp_audit_trail.rst
A doc/manual/source/gmp/gmp_automation.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
A doc/manual/source/gmp/gmp_data_acquisition/index.rst
A doc/manual/source/gmp/gmp_protocol_development.rst
A doc/manual/source/gmp/gmp_report_generator.rst
A doc/manual/source/gmp/gmp_signature.rst
A doc/manual/source/gmp/index.rst
A doc/manual/source/grid_editor.rst
A doc/manual/source/idist_combine.rst
A doc/manual/source/index.rst
A doc/manual/source/make.bat
A doc/manual/source/manage_data.rst
A doc/manual/source/model_editor.rst
A doc/manual/source/mwl_species_fit.rst
A doc/manual/source/mwl_species_sim.rst
A doc/manual/source/mwl_spectra.rst
A doc/manual/source/mwlr_viewer.rst
A doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/pcsa.rst
A doc/manual/source/pcsa/pcsa_adv.rst
A doc/manual/source/pcsa/pcsa_analys.rst
A doc/manual/source/pcsa/pcsa_mlines.rst
A doc/manual/source/pcsa/pcsa_results.rst
A doc/manual/source/pcsa/pcsa_rpscan.rst
A doc/manual/source/predict1.rst
A doc/manual/source/predict2.rst
A doc/manual/source/pseudo3d.rst
A doc/manual/source/ramp_data.rst
A doc/manual/source/register.rst
A doc/manual/source/reporter.rst
A doc/manual/source/requirements.txt
A doc/manual/source/rmsd_query.rst
A doc/manual/source/rotor.rst
A doc/manual/source/rotor_calibration.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page.rst
A doc/manual/source/temp.txt
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmp.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
Log Message:
-----------
ACAB doubled
Commit: d287d24ac45d15c14c50dffde79d3abcf44e1c47
https://github.com/ehb54/ultrascan3/commit/d287d24ac45d15c14c50dffde79d3abcf44e1c47
Author: Saeed <github.com/samo38>
Date: 2026-02-06 (Fri, 06 Feb 2026)
Changed paths:
M gui/us_spectrodata.h
Log Message:
-----------
us_spectrodata: add hydrodynamic radius to S_Solute
Commit: 1a9eda0deabbf567b25ddd721c01232463c6d549
https://github.com/ehb54/ultrascan3/commit/1a9eda0deabbf567b25ddd721c01232463c6d549
Author: Saeed <github.com/samo38>
Date: 2026-02-06 (Fri, 06 Feb 2026)
Changed paths:
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
Log Message:
-----------
us_integral: replace SolParam with S_Solute
Commit: f422eaebafa361f357d0b27d3f56d3f4d3247f8e
https://github.com/ehb54/ultrascan3/commit/f422eaebafa361f357d0b27d3f56d3f4d3247f8e
Author: Saeed <github.com/samo38>
Date: 2026-02-10 (Tue, 10 Feb 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
Log Message:
-----------
us_ga_init: add Rh
Commit: b4b6df18011d41ed7209dca2fa4580a93512d976
https://github.com/ehb54/ultrascan3/commit/b4b6df18011d41ed7209dca2fa4580a93512d976
Author: Saeed <github.com/samo38>
Date: 2026-02-11 (Wed, 11 Feb 2026)
Changed paths:
M programs/us_ga_init/us_solutedata.cpp
Log Message:
-----------
us_ga_init/us_solutedata: add Hr to the report file
Commit: a10c820b1808470ff1529c74ae9e8cbb6f2db80f
https://github.com/ehb54/ultrascan3/commit/a10c820b1808470ff1529c74ae9e8cbb6f2db80f
Author: Saeed <github.com/samo38>
Date: 2026-02-11 (Wed, 11 Feb 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
Log Message:
-----------
us_ddist_combine: add Rh to the discrete distributions program
Commit: 3e454dd1eca619263c23dc1206fe22fb60c737c4
https://github.com/ehb54/ultrascan3/commit/3e454dd1eca619263c23dc1206fe22fb60c737c4
Author: Saeed <github.com/samo38>
Date: 2026-02-11 (Wed, 11 Feb 2026)
Changed paths:
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_699
Commit: 482dbb495512e7628e78756240055909d096c476
https://github.com/ehb54/ultrascan3/commit/482dbb495512e7628e78756240055909d096c476
Author: Saeed <github.com/samo38>
Date: 2026-02-12 (Thu, 12 Feb 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_integral/us_integral.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
Log Message:
-----------
us nm unit for hydrodynamic radius
Commit: 678ff7f6c7bed9024cc5f25e855c87b95ed0db50
https://github.com/ehb54/ultrascan3/commit/678ff7f6c7bed9024cc5f25e855c87b95ed0db50
Author: Saeed Mortezazadeh <saeed.mortezazadeh25 at gmail.com>
Date: 2026-02-17 (Tue, 17 Feb 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
Log Message:
-----------
us_ga_init: replace plot checkboxs with radiobuttons
Commit: d787112c42145adc032e986e17be63d8efd5dfda
https://github.com/ehb54/ultrascan3/commit/d787112c42145adc032e986e17be63d8efd5dfda
Author: Saeed <github.com/samo38>
Date: 2026-02-19 (Thu, 19 Feb 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
Log Message:
-----------
add check_draw_btn
Commit: ba06a7cd941b1bb63391e1fba5d30baf782f4d3e
https://github.com/ehb54/ultrascan3/commit/ba06a7cd941b1bb63391e1fba5d30baf782f4d3e
Author: Saeed <github.com/samo38>
Date: 2026-02-19 (Thu, 19 Feb 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
A admin/cmake/toolchain-macos.cmake
A admin/cmake/triplets/arm64-osx-dynamic.cmake
M admin/cmake/triplets/x64-osx-dynamic.cmake
R alpha/srcdevel
R alpha/us.cpp
M gui/us_analysis_base2.cpp
M gui/us_analysis_base2.h
M gui/us_model_loader.cpp
M gui/us_plot.cpp
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_2dsa.h
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_dcdt/us_dcdt.cpp
M programs/us_dcdt/us_dcdt.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fit_meniscus/CMakeLists.txt
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_fit_meniscus/us_fit_meniscus.h
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_second_moment/us_second_moment.cpp
M programs/us_second_moment/us_second_moment.h
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.h
M scripts/build.sh
A test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_699
Commit: a6fe9c7b13c638a88e1390c744efd98cbec59acf
https://github.com/ehb54/ultrascan3/commit/a6fe9c7b13c638a88e1390c744efd98cbec59acf
Author: Saeed Mortezazadeh <saeed.mortezazadeh25 at gmail.com>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
Log Message:
-----------
add anno_label(int) to us_ga_init
Commit: 8617cadc6147eda447864b6626622e9bffa4128e
https://github.com/ehb54/ultrascan3/commit/8617cadc6147eda447864b6626622e9bffa4128e
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
A doc/manual/source/_static/images/bad_grid.png
A doc/manual/source/_static/images/beck_convert-2.png
A doc/manual/source/_static/images/beck_converter.png
A doc/manual/source/_static/images/good_grid.png
A doc/manual/source/_static/images/grid-setup.png
A doc/manual/source/_static/images/mwlr_spectra_3d.png
A doc/manual/source/_static/images/mwlr_spectra_cont.png
A doc/manual/source/_static/images/mwlr_spectra_f.png
A doc/manual/source/_static/images/mwlr_spectra_o.png
A doc/manual/source/_static/images/mwlr_spectra_save.png
A doc/manual/source/_static/images/set-zvalue.png
A doc/manual/source/_static/images/xpn_viewer-loaded.png
A doc/manual/source/_static/images/xpn_viewer-saved.png
A doc/manual/source/_static/images/xpn_viewer.png
A doc/manual/source/_static/images/zvalue_eq.png
M doc/manual/source/beckman_openauc.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/index.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/mwl_species_fit.rst
M doc/manual/source/mwl_species_sim.rst
M doc/manual/source/mwl_spectra.rst
M doc/manual/source/predict1.rst
M doc/manual/source/ramp_data.rst
M doc/manual/source/tmp.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
WALICAFB
Commit: 779bf5e32b16d7eddc415ecc2fe90709ac0026b9
https://github.com/ehb54/ultrascan3/commit/779bf5e32b16d7eddc415ecc2fe90709ac0026b9
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
A .github/workflows/bump-version.yml
M CMakeLists.txt
M CMakePresets.json
A admin/cmake/toolchain-macos.cmake
A admin/cmake/triplets/arm64-osx-dynamic.cmake
M admin/cmake/triplets/x64-osx-dynamic.cmake
R alpha/srcdevel
R alpha/us.cpp
M gui/us_analysis_base2.cpp
M gui/us_analysis_base2.h
M gui/us_csv_loader.cpp
M gui/us_model_loader.cpp
M gui/us_plot.cpp
M gui/us_report_gui.cpp
M gui/us_report_gui.h
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_2dsa.h
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_dcdt/us_dcdt.cpp
M programs/us_dcdt/us_dcdt.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fit_meniscus/CMakeLists.txt
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_fit_meniscus/us_fit_meniscus.h
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_second_moment/us_second_moment.cpp
M programs/us_second_moment/us_second_moment.h
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.h
M scripts/build.sh
A test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
M utils/us_csv_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'origin/main' into haben-Dev
Commit: 935d35d3bb247201260925626ead40c7e5911908
https://github.com/ehb54/ultrascan3/commit/935d35d3bb247201260925626ead40c7e5911908
Author: Saeed <github.com/samo38>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
Log Message:
-----------
add help button to the us_legacy_converter
Commit: a39e0c3fc901b37000aa384dff633eca9b5f21cc
https://github.com/ehb54/ultrascan3/commit/a39e0c3fc901b37000aa384dff633eca9b5f21cc
Author: Saeed <github.com/samo38>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
Log Message:
-----------
us_query_rmsd: add help button
Commit: 9332b11c468511b91b824048956f411d88e92ba2
https://github.com/ehb54/ultrascan3/commit/9332b11c468511b91b824048956f411d88e92ba2
Author: Saeed <github.com/samo38>
Date: 2026-02-20 (Fri, 20 Feb 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
add help buttons
Commit: 7bf106993a8f72d94033f56ec908772b1087c0ef
https://github.com/ehb54/ultrascan3/commit/7bf106993a8f72d94033f56ec908772b1087c0ef
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-02-21 (Sat, 21 Feb 2026)
Changed paths:
M .github/workflows/bump-version.yml
M README.manual
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
R doc/manual/source/#Makefile#
M doc/manual/source/conf.py
R doc/manual/source/make.bat
M doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/us_help.cpp
M makeall.sh
M scripts/build.sh
R vcpkg
M vcpkg.json
Log Message:
-----------
mod: delete legacy help, integrate sphinx help
Commit: 3d08b0b47f4e2317e53a69e11dc522f164182ec7
https://github.com/ehb54/ultrascan3/commit/3d08b0b47f4e2317e53a69e11dc522f164182ec7
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-02-21 (Sat, 21 Feb 2026)
Changed paths:
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
Log Message:
-----------
mod: release only build for macos
Commit: 7d351ae823d28a24be8d1406165cb8c4887fb1e7
https://github.com/ehb54/ultrascan3/commit/7d351ae823d28a24be8d1406165cb8c4887fb1e7
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-02-21 (Sat, 21 Feb 2026)
Changed paths:
M gui/us_report_gui.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: d0f42eef0df776ad01ea51cc7505eeb80878b2d8
https://github.com/ehb54/ultrascan3/commit/d0f42eef0df776ad01ea51cc7505eeb80878b2d8
Author: Saeed <github.com/samo38>
Date: 2026-02-23 (Mon, 23 Feb 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: removed unnecessary widgets
Commit: 534da76a2eb5090416dc3e2fa4416db272ac9b91
https://github.com/ehb54/ultrascan3/commit/534da76a2eb5090416dc3e2fa4416db272ac9b91
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-02-24 (Tue, 24 Feb 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: 98c5f9693e9265ed8f1515603098010def86eb70
https://github.com/ehb54/ultrascan3/commit/98c5f9693e9265ed8f1515603098010def86eb70
Author: Saeed <github.com/samo38>
Date: 2026-02-24 (Tue, 24 Feb 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
rename labels
Commit: d28e726d4e40aae7be0f55ed03c1e7fe45e36d00
https://github.com/ehb54/ultrascan3/commit/d28e726d4e40aae7be0f55ed03c1e7fe45e36d00
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-02-24 (Tue, 24 Feb 2026)
Changed paths:
M doc/manual/source/colorgradient.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/mwl_spectra.rst
M doc/manual/source/mwlr_viewer.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/requirements.txt
M doc/manual/source/us_project.rst
M doc/manual/source/vhw_combine.rst
Log Message:
-----------
mod: migrate to sphinx-design from subfigure
Commit: f22ac1211864fd6e1e0f4bd0ab603df9a6703163
https://github.com/ehb54/ultrascan3/commit/f22ac1211864fd6e1e0f4bd0ab603df9a6703163
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M utils/us_astfem_math.cpp
M utils/us_cfa_data.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Add support for `TIMESTATE_TYPE` and `IMPORT_TYPE` in `US_TimeState`: introduce enums, accessor methods, and XML serialization logic.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 92969167df27d9df138b7faee2cb16d988228790
https://github.com/ehb54/ultrascan3/commit/92969167df27d9df138b7faee2cb16d988228790
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
Log Message:
-----------
Refactor `US_AstfemMath`: add parameter names to function signatures, update `check_acceleration` to include optional `timestate` argument, and adjust related logic.
Commit: 8318d566a89cb3e06093e1d79d56d11d3488103a
https://github.com/ehb54/ultrascan3/commit/8318d566a89cb3e06093e1d79d56d11d3488103a
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
R admin/cmake/toolchain-macos.cmake
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-windows.cmake
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui/CMakeLists.txt
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M programs/us/CMakeLists.txt
M qwtplot3d/include/qwt3d_openglhelper.h
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: 4bb72c42f9441f20b9b825741d31d186a728fe4c
https://github.com/ehb54/ultrascan3/commit/4bb72c42f9441f20b9b825741d31d186a728fe4c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-osx-dynamic.cmake
A admin/cmake/triplets/arm64-windows.cmake
M admin/cmake/triplets/x64-osx-dynamic.cmake
R alpha/srcdevel
R alpha/us.cpp
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui/CMakeLists.txt
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M gui/us_analysis_base2.cpp
M gui/us_analysis_base2.h
M gui/us_csv_loader.cpp
M gui/us_model_loader.cpp
M gui/us_plot.cpp
M gui/us_report_gui.cpp
M gui/us_report_gui.h
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_2dsa.h
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_dcdt/us_dcdt.cpp
M programs/us_dcdt/us_dcdt.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fit_meniscus/CMakeLists.txt
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_fit_meniscus/us_fit_meniscus.h
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_pcsa/us_pcsa.cpp
M programs/us_pcsa/us_pcsa.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_second_moment/us_second_moment.cpp
M programs/us_second_moment/us_second_moment.h
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.h
M qwtplot3d/include/qwt3d_openglhelper.h
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
A test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
M utils/us_csv_data.cpp
R vcpkg
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into ticket_747
Commit: 89b7691a714d92e99e335e23378d225aa3b1b536
https://github.com/ehb54/ultrascan3/commit/89b7691a714d92e99e335e23378d225aa3b1b536
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M programs/us/revision.sh
Log Message:
-----------
fix revision.sh checks osx/linux compat.
Commit: b1b7791e9c3922286c2d9d56c2f0a378911720ee
https://github.com/ehb54/ultrascan3/commit/b1b7791e9c3922286c2d9d56c2f0a378911720ee
Author: Saeed <github.com/samo38>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
Log Message:
-----------
add Rh to us_pseudo3d_combine
Commit: bd32e3b102e354732b319bc5687719785b83d3f2
https://github.com/ehb54/ultrascan3/commit/bd32e3b102e354732b319bc5687719785b83d3f2
Author: Saeed <github.com/samo38>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
R admin/cmake/toolchain-macos.cmake
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-windows.cmake
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui/CMakeLists.txt
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M gui/us_report_gui.cpp
M programs/us/CMakeLists.txt
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M qwtplot3d/include/qwt3d_openglhelper.h
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
R vcpkg
M vcpkg.json
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_699
Commit: 8c545d6f5c77a42afc10d3badcaa8f9b34866f2d
https://github.com/ehb54/ultrascan3/commit/8c545d6f5c77a42afc10d3badcaa8f9b34866f2d
Author: Saeed <github.com/samo38>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
R admin/cmake/toolchain-macos.cmake
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-windows.cmake
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui/CMakeLists.txt
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M gui/us_report_gui.cpp
M programs/us/CMakeLists.txt
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M qwtplot3d/include/qwt3d_openglhelper.h
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
R vcpkg
M vcpkg.json
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_748
Commit: 38b548536c2c0458b2cc85f5663ca56eb9538f3f
https://github.com/ehb54/ultrascan3/commit/38b548536c2c0458b2cc85f5663ca56eb9538f3f
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M gui/us_spectrodata.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
Log Message:
-----------
Merge pull request #362 from samo38/ticket_699
Ticket 699: adding Hydrodynamic radius to additional plotting programs
Commit: 572bb723ed591be3225aacbdbc387c93c17ca792
https://github.com/ehb54/ultrascan3/commit/572bb723ed591be3225aacbdbc387c93c17ca792
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-02-26 (Thu, 26 Feb 2026)
Changed paths:
M gui/us_spectrodata.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: 6dd71c26fbdb258b25259c7c5e41be982d54a809
https://github.com/ehb54/ultrascan3/commit/6dd71c26fbdb258b25259c7c5e41be982d54a809
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Refactor US_Crypto for AES-256-GCM encryption
Commit: 1461b65d9eae700e3429db2b7c19c35361fea861
https://github.com/ehb54/ultrascan3/commit/1461b65d9eae700e3429db2b7c19c35361fea861
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M utils/us_crypto.h
Log Message:
-----------
Add decryptLegacy function and update decrypt signature
Commit: ed2647558eb754fa66c8e7d52d3f0b8efac2c53c
https://github.com/ehb54/ultrascan3/commit/ed2647558eb754fa66c8e7d52d3f0b8efac2c53c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
Log Message:
-----------
Update encryption tests to expect invalid results
Commit: 27402a271781fa16ae00a693e5ce8e3f06e8e33e
https://github.com/ehb54/ultrascan3/commit/27402a271781fa16ae00a693e5ce8e3f06e8e33e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M utils/us_crypto.h
Log Message:
-----------
Fix parameter description for decrypt functions
Commit: 344a4930c5819ebfd2875eccc84d0a44a446ee31
https://github.com/ehb54/ultrascan3/commit/344a4930c5819ebfd2875eccc84d0a44a446ee31
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Fix encryption finalization logic in us_crypto.cpp
Commit: 817a32ad7fe5e5c35ec0479673a2f4c20a7a8e3c
https://github.com/ehb54/ultrascan3/commit/817a32ad7fe5e5c35ec0479673a2f4c20a7a8e3c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Fix tag data retrieval in EVP_CIPHER_CTX_ctrl
Commit: 85100ef73842bc75a8f210f7b9038301adae82db
https://github.com/ehb54/ultrascan3/commit/85100ef73842bc75a8f210f7b9038301adae82db
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-02-27 (Fri, 27 Feb 2026)
Changed paths:
M gui/us_spectrodata.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: 7f63285b165bc88c2a317f9f368082e0d24d8861
https://github.com/ehb54/ultrascan3/commit/7f63285b165bc88c2a317f9f368082e0d24d8861
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-02-28 (Sat, 28 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
A admin/cmake/MacDeploy.cmake
R buildsys/vcpkg/overlay-ports/qt5-tools/fix-pkgconfig-qt5uiplugin-not-found.patch
R buildsys/vcpkg/overlay-ports/qt5-tools/fix-spawnvp-argv.patch
R buildsys/vcpkg/overlay-ports/qt5-tools/libclang.patch
R buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
R buildsys/vcpkg/overlay-ports/qt5-tools/vcpkg.json
M doc/manual/CMakeLists.txt
A doc/manual/StageAssistant.cmake
M doc/manual/source/mwl_spectra.rst
M gui/CMakeLists.txt
M gui/us_help.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M qwtplot3d/CMakeLists.txt
M scripts/build.sh
M vcpkg.json
Log Message:
-----------
fix: fix qt help search and implement dmg
Commit: 8e3d67b30d1a4eaf6faf0d18d80a835288ee5ae7
https://github.com/ehb54/ultrascan3/commit/8e3d67b30d1a4eaf6faf0d18d80a835288ee5ae7
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-02-28 (Sat, 28 Feb 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
R admin/cmake/toolchain-macos.cmake
A admin/cmake/toolchain.cmake
A admin/cmake/triplets/arm64-linux.cmake
A admin/cmake/triplets/arm64-windows.cmake
A etc/icons/make-icons.sh
A etc/icons/us3-icon-master-512.png
M etc/us3-icon-128x128.ico
M etc/us3-icon-128x128.png
M etc/us3-icon-32x32.png
M etc/us3-icon-48x48.ico
M etc/us3-icon-48x48.png
M etc/us3-icon.icns
M gui/CMakeLists.txt
M gui/images/us3-icon-128x128.png
M gui/images/us3-icon-16x16.png
M gui/images/us3-icon-256x256.png
M gui/images/us3-icon-32x32.png
M gui/images/us3-icon-48x48.png
M gui/images/us3-icon-512x512.png
M gui/images/us3-icon-64x64.png
M gui/us_spectrodata.h
M programs/us/CMakeLists.txt
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M qwtplot3d/include/qwt3d_openglhelper.h
A scripts/build.bat
A scripts/build.ps1
M scripts/build.sh
M vcpkg.json
Log Message:
-----------
Merge remote-tracking branch 'origin/527-enhancement-sphinx-migration-2' into 527-enhancement-sphinx-migration-2
# Conflicts:
# .gitignore
# scripts/build.sh
Commit: ef3356b450a93ec526f92ee27da0a9bfcfa9c04a
https://github.com/ehb54/ultrascan3/commit/ef3356b450a93ec526f92ee27da0a9bfcfa9c04a
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-01 (Sun, 01 Mar 2026)
Changed paths:
M LICENSE.txt
Log Message:
-----------
fix: text was original utf-8 so quotes became questions marks with ascii tool. Changed ? to ascii quotes.
Commit: 096f3590c1a57a798a0c13863e80d333a690b4cf
https://github.com/ehb54/ultrascan3/commit/096f3590c1a57a798a0c13863e80d333a690b4cf
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-02 (Mon, 02 Mar 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Fix type casting for GCM tag data
Commit: ca6f560338cfe03c4fa0e60bb95577b526dbf2ed
https://github.com/ehb54/ultrascan3/commit/ca6f560338cfe03c4fa0e60bb95577b526dbf2ed
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-02 (Mon, 02 Mar 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Fix type casting for GCM tag in us_crypto.cpp
Commit: 82c2dc2269b90376cf1f69ca3f88b4bee38c641e
https://github.com/ehb54/ultrascan3/commit/82c2dc2269b90376cf1f69ca3f88b4bee38c641e
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-02 (Mon, 02 Mar 2026)
Changed paths:
R admin/cmake/MacDeploy.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M scripts/build.sh
Log Message:
-----------
add: launcher and packaging step
Commit: 88ef4e481d1b4ea751d997b156e3782f1befce93
https://github.com/ehb54/ultrascan3/commit/88ef4e481d1b4ea751d997b156e3782f1befce93
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-02 (Mon, 02 Mar 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/toolchain.cmake
M doc/manual/CMakeLists.txt
M doc/manual/StageAssistant.cmake
Log Message:
-----------
add: working qt6 build and install
Commit: 5ee4575063fb99b0b70eb335bc0d88e3a903b857
https://github.com/ehb54/ultrascan3/commit/5ee4575063fb99b0b70eb335bc0d88e3a903b857
Author: Saeed <github.com/samo38>
Date: 2026-03-03 (Tue, 03 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: update GUI and DataProfile
Commit: d864a615e96c4dd2c66a738120c35c6eb556d647
https://github.com/ehb54/ultrascan3/commit/d864a615e96c4dd2c66a738120c35c6eb556d647
Author: Saeed <github.com/samo38>
Date: 2026-03-03 (Tue, 03 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: use minmax
Commit: 644141ae003ec988b86eb7b01c1e21cf208b0dac
https://github.com/ehb54/ultrascan3/commit/644141ae003ec988b86eb7b01c1e21cf208b0dac
Author: Saeed <github.com/samo38>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M gui/us_spectrodata.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_748
Commit: d1215ab67e2f9e4aa0bcf349eac8da7f58a9be6a
https://github.com/ehb54/ultrascan3/commit/d1215ab67e2f9e4aa0bcf349eac8da7f58a9be6a
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
Log Message:
-----------
mod: update 128x128 us-gmp icon and remove others
Commit: ff02149480e771cbc205a241cee2322ae52a5ea3
https://github.com/ehb54/ultrascan3/commit/ff02149480e771cbc205a241cee2322ae52a5ea3
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
R propignore
R proppng
R proptext
Log Message:
-----------
mod: delete svn files
Commit: 0d744f1905b897d66da68befb43637e8ac4cd7bc
https://github.com/ehb54/ultrascan3/commit/0d744f1905b897d66da68befb43637e8ac4cd7bc
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
R README.linguist
M gui/libus_gui.pro
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
R qwtplot3d/lingua_de.ts
M utils/libus_utils.pro
Log Message:
-----------
mod: remove deprecated translation files and settings
Commit: 04583d8a1b0bcf01875f31b93a12343610284126
https://github.com/ehb54/ultrascan3/commit/04583d8a1b0bcf01875f31b93a12343610284126
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M CMakeLists.txt
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
Log Message:
-----------
add: windows installer
Commit: 20b958cec1d253988daedd88a2fec65efd28448d
https://github.com/ehb54/ultrascan3/commit/20b958cec1d253988daedd88a2fec65efd28448d
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M scripts/build.ps1
Log Message:
-----------
add: pkg command to build.ps1
Commit: 722ffd5c4e0c7d1f2f2c27127e065270ae3c7598
https://github.com/ehb54/ultrascan3/commit/722ffd5c4e0c7d1f2f2c27127e065270ae3c7598
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
Log Message:
-----------
Merge pull request #380 from ehb54/773-request-update-us-3-gmp-icons
Icon Maintenance
Commit: 47dbf4a3837c551d64f6436f25aa7f5f7d482fad
https://github.com/ehb54/ultrascan3/commit/47dbf4a3837c551d64f6436f25aa7f5f7d482fad
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
Log Message:
-----------
Merge branch 'main' into 775-bug-svn-files
Commit: 93fb5f9f839b1aea6d85ed568acc18030ebed5c1
https://github.com/ehb54/ultrascan3/commit/93fb5f9f839b1aea6d85ed568acc18030ebed5c1
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
Log Message:
-----------
Merge branch 'main' into 756-bug-translation-maintenance
Commit: fe5370afd345acf40744a8c872c09eef88887bba
https://github.com/ehb54/ultrascan3/commit/fe5370afd345acf40744a8c872c09eef88887bba
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
R propignore
R proppng
R proptext
Log Message:
-----------
Merge pull request #381 from ehb54/775-bug-svn-files
Remove Legacy SVN Files
Commit: b1b7bdf318164406971f4188a7b3cf8b0aacbbaa
https://github.com/ehb54/ultrascan3/commit/b1b7bdf318164406971f4188a7b3cf8b0aacbbaa
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
Log Message:
-----------
Merge branch 'main' into 756-bug-translation-maintenance
Commit: 90e9cf2eb989a85420f4668067092a143d4457a9
https://github.com/ehb54/ultrascan3/commit/90e9cf2eb989a85420f4668067092a143d4457a9
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
R README.linguist
M gui/libus_gui.pro
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
R qwtplot3d/lingua_de.ts
M utils/libus_utils.pro
Log Message:
-----------
Merge pull request #382 from ehb54/756-bug-translation-maintenance
Translation File Maintenance
Commit: 2698e05dd320a374785cab43ed05a52db3c5c3a7
https://github.com/ehb54/ultrascan3/commit/2698e05dd320a374785cab43ed05a52db3c5c3a7
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WinPkg.cmake
M scripts/build.ps1
Log Message:
-----------
fix: missing programs in installer package
Commit: 499648d1ea27751d008981e0d9f1447cfbef7072
https://github.com/ehb54/ultrascan3/commit/499648d1ea27751d008981e0d9f1447cfbef7072
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-04 (Wed, 04 Mar 2026)
Changed paths:
M CMakeLists.txt
M scripts/build.ps1
Log Message:
-----------
fix: missing sphinx on windows build
Commit: 300852b8d51c2733817729fab46d6d0e68f5e717
https://github.com/ehb54/ultrascan3/commit/300852b8d51c2733817729fab46d6d0e68f5e717
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M utils/libus_utils.pro
Log Message:
-----------
Merge branch 'main' into lukas/us_crypto_buffer_overflow
Commit: 2fcc6637f35ea3ab3c8e1450a06b60932d033f1b
https://github.com/ehb54/ultrascan3/commit/2fcc6637f35ea3ab3c8e1450a06b60932d033f1b
Author: Saeed <samo38:github>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: update
Commit: 9c62b533654400def76e5db0eb8c8f4924ff66d1
https://github.com/ehb54/ultrascan3/commit/9c62b533654400def76e5db0eb8c8f4924ff66d1
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M gui/us_spectrodata.h
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M utils/libus_utils.pro
Log Message:
-----------
Merge pull request #383 from ehb54/main
Update feature branch to main
Commit: 0f7d005ceda3b8031c1180200237d736f60a1b4c
https://github.com/ehb54/ultrascan3/commit/0f7d005ceda3b8031c1180200237d736f60a1b4c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
Log Message:
-----------
Merge pull request #379 from ehb54/lukas/us_crypto_buffer_overflow
us_crypto: Avoid buffer overflow, support longer passwords, introduce safer encryption
Commit: 780dac6301b72554362f7cc2944a17a6c64d2aa5
https://github.com/ehb54/ultrascan3/commit/780dac6301b72554362f7cc2944a17a6c64d2aa5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M utils/us_astfem_math.cpp
Log Message:
-----------
Refactor `US_AstfemMath`: improve low acceleration rate handling by adding corrections for slow experiments and original `timestate` checks.
Commit: 01be09bde2a7cc42512e4a4f215108a9419c0d32
https://github.com/ehb54/ultrascan3/commit/01be09bde2a7cc42512e4a4f215108a9419c0d32
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M gui/us_convert_gui.h
Log Message:
-----------
Add `prepareTimeState` method and integrate `US_TimeState` into `US_ConvertGui`
Commit: e0424b860fb5077ab33b7e5db663b721da5ba290
https://github.com/ehb54/ultrascan3/commit/e0424b860fb5077ab33b7e5db663b721da5ba290
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
Log Message:
-----------
Refactor `US_ConvertGui`: implement `prepareTimeState` for streamlined time state preparation and integrate into speed step processing logic.
Commit: 97b756dde416093dc9c7bb730c4958161c0e0232
https://github.com/ehb54/ultrascan3/commit/97b756dde416093dc9c7bb730c4958161c0e0232
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
Log Message:
-----------
Merge branch 'main' into lukas/timestate
Commit: b2c2afd33a8ed941e547021628bcb32abea1675a
https://github.com/ehb54/ultrascan3/commit/b2c2afd33a8ed941e547021628bcb32abea1675a
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M test/utils/test_us_crypto.cpp
M utils/libus_utils.pro
M utils/us_crypto.cpp
M utils/us_crypto.h
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: ea9b77b204f53d6694d97541134564d0606916a3
https://github.com/ehb54/ultrascan3/commit/ea9b77b204f53d6694d97541134564d0606916a3
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
Log Message:
-----------
Refactor `US_ConvertGui`: streamline file handling logic in time state preparation and enable GUI button state based on file existence.
Commit: 11fa3a30cb824bce1c32920aa3a6b2c307f54f1a
https://github.com/ehb54/ultrascan3/commit/11fa3a30cb824bce1c32920aa3a6b2c307f54f1a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M utils/us_astfem_math.cpp
Log Message:
-----------
Refactor `US_AstfemMath`: replace `qDebug` with `DbgLv` for consistent debug logging.
Commit: 5eb4adb03f6cf6e0ab2a6163a5d614d3b034d383
https://github.com/ehb54/ultrascan3/commit/5eb4adb03f6cf6e0ab2a6163a5d614d3b034d383
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M test/utils/test_us_time_state.cpp
Log Message:
-----------
Update `test_us_time_state`: adjust expected version to `2.2` in origin test.
Commit: 41a6910c567f5d60a14f6a802af0a1134eef03c4
https://github.com/ehb54/ultrascan3/commit/41a6910c567f5d60a14f6a802af0a1134eef03c4
Author: Saeed <samo38:github>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
add argsort and sort functions
Commit: bc8f22c93dcad653e16c52717a9386d9a99c67c9
https://github.com/ehb54/ultrascan3/commit/bc8f22c93dcad653e16c52717a9386d9a99c67c9
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Refactor password re-encryption logic
Commit: 93b2e5a2535f0de5b6fe2b4384a60d509571f6d4
https://github.com/ehb54/ultrascan3/commit/93b2e5a2535f0de5b6fe2b4384a60d509571f6d4
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Check for empty cipherHex and optimize database loop
Added a check for empty cipherHex before decryption and modified the database loop to use a reference.
Commit: 6a9245189a1804e4557df78035f6f4401a5883ea
https://github.com/ehb54/ultrascan3/commit/6a9245189a1804e4557df78035f6f4401a5883ea
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-05 (Thu, 05 Mar 2026)
Changed paths:
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_adv.rst
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
M doc/manual/source/3d_plot.rst
R doc/manual/source/_static/custom.css
R doc/manual/source/_static/images/2dsa_3dplot.png
R doc/manual/source/_static/images/2dsa_advan.png
R doc/manual/source/_static/images/2dsa_analvv.png
R doc/manual/source/_static/images/2dsa_analys.png
R doc/manual/source/_static/images/2dsa_main-c.png
R doc/manual/source/_static/images/2dsa_main-o.png
R doc/manual/source/_static/images/2dsa_resplot.png
R doc/manual/source/_static/images/D20W_bar.png
R doc/manual/source/_static/images/MW-bar.png
R doc/manual/source/_static/images/RINplot.png
R doc/manual/source/_static/images/TINplot.png
R doc/manual/source/_static/images/UltraScan-logo.png
R doc/manual/source/_static/images/add_RIN-TIN.png
R doc/manual/source/_static/images/add_RIN.png
R doc/manual/source/_static/images/add_TIN.png
R doc/manual/source/_static/images/advanced_config.png
R doc/manual/source/_static/images/analyte_details.png
R doc/manual/source/_static/images/analyte_edit.png
R doc/manual/source/_static/images/analyte_edit_spec.png
R doc/manual/source/_static/images/analyte_new_sequence.png
R doc/manual/source/_static/images/analyte_newc.png
R doc/manual/source/_static/images/analyte_newd.png
R doc/manual/source/_static/images/analyte_newp.png
R doc/manual/source/_static/images/analyte_selectc.png
R doc/manual/source/_static/images/analyte_selectd.png
R doc/manual/source/_static/images/analyte_selectp.png
R doc/manual/source/_static/images/analyte_sequence.png
R doc/manual/source/_static/images/analyte_settings.png
R doc/manual/source/_static/images/analyte_spec-gui.png
R doc/manual/source/_static/images/analyte_specmenu.png
R doc/manual/source/_static/images/analyte_spectrum.png
R doc/manual/source/_static/images/analytes.png
R doc/manual/source/_static/images/associations.png
R doc/manual/source/_static/images/astfem_sim.png
R doc/manual/source/_static/images/bad_grid.png
R doc/manual/source/_static/images/beck_convert-2.png
R doc/manual/source/_static/images/beck_converter.png
R doc/manual/source/_static/images/bitmap.png
R doc/manual/source/_static/images/buffer_edit.png
R doc/manual/source/_static/images/buffer_edit_setting.png
R doc/manual/source/_static/images/buffer_edit_spectrum.png
R doc/manual/source/_static/images/buffer_info.png
R doc/manual/source/_static/images/buffer_manage_spectrum.png
R doc/manual/source/_static/images/buffer_new.png
R doc/manual/source/_static/images/buffer_new_spectrum.png
R doc/manual/source/_static/images/buffer_select.png
R doc/manual/source/_static/images/buffer_settings.png
R doc/manual/source/_static/images/buffer_spectrum.png
R doc/manual/source/_static/images/cfa_view-loadauc.png
R doc/manual/source/_static/images/cfa_view-loadraw.png
R doc/manual/source/_static/images/cfa_view-main.png
R doc/manual/source/_static/images/cfa_view-statsauc.png
R doc/manual/source/_static/images/cfa_view-statsraw.png
R doc/manual/source/_static/images/color-1.png
R doc/manual/source/_static/images/color-2.png
R doc/manual/source/_static/images/color-a.png
R doc/manual/source/_static/images/color-b.png
R doc/manual/source/_static/images/colorgrad1.png
R doc/manual/source/_static/images/colorgradient/col1_colgen.png
R doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
R doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
R doc/manual/source/_static/images/colorgradient/col2_colgen.png
R doc/manual/source/_static/images/colorgradient/colorgrad.png
R doc/manual/source/_static/images/colorgradient/colorgradient_main.png
R doc/manual/source/_static/images/colorgradient/components.png
R doc/manual/source/_static/images/colorgradient/model_editor.png
R doc/manual/source/_static/images/combine_models-idedit.png
R doc/manual/source/_static/images/combine_models-save.png
R doc/manual/source/_static/images/combine_models.png
R doc/manual/source/_static/images/components.png
R doc/manual/source/_static/images/config.png
R doc/manual/source/_static/images/config1.png
R doc/manual/source/_static/images/config2.png
R doc/manual/source/_static/images/config_plot.png
R doc/manual/source/_static/images/convert-RIdata.png
R doc/manual/source/_static/images/convert-exclude.png
R doc/manual/source/_static/images/convert-experiment.png
R doc/manual/source/_static/images/convert-mwl.png
R doc/manual/source/_static/images/convert-seltrip.png
R doc/manual/source/_static/images/convert-subset.png
R doc/manual/source/_static/images/convert-tolerance.png
R doc/manual/source/_static/images/convert.png
R doc/manual/source/_static/images/custom_grid-1.png
R doc/manual/source/_static/images/custom_grid.png
R doc/manual/source/_static/images/data_converter.png
R doc/manual/source/_static/images/data_loader-edits.png
R doc/manual/source/_static/images/data_loader-trips.png
R doc/manual/source/_static/images/data_loader.png
R doc/manual/source/_static/images/database.png
R doc/manual/source/_static/images/ddist_combine-selrun.png
R doc/manual/source/_static/images/ddist_combine.png
R doc/manual/source/_static/images/densmatch_main.png
R doc/manual/source/_static/images/densmatch_mpars_completed.png
R doc/manual/source/_static/images/densmatch_mpars_empty.png
R doc/manual/source/_static/images/densmatch_rmvmodels.png
R doc/manual/source/_static/images/edit_buffer_spec_menu.png
R doc/manual/source/_static/images/eq1-mean.png
R doc/manual/source/_static/images/eq2-skew.png
R doc/manual/source/_static/images/eq3-kurtosis.png
R doc/manual/source/_static/images/eq4-moments.png
R doc/manual/source/_static/images/eq5-variance.png
R doc/manual/source/_static/images/eq6-stddev.png
R doc/manual/source/_static/images/eq7-probsigma.png
R doc/manual/source/_static/images/eq8-confidence.png
R doc/manual/source/_static/images/experiment_cells.png
R doc/manual/source/_static/images/experiment_general.png
R doc/manual/source/_static/images/experiment_optics.png
R doc/manual/source/_static/images/experiment_overview.png
R doc/manual/source/_static/images/experiment_photomult.png
R doc/manual/source/_static/images/experiment_range.png
R doc/manual/source/_static/images/experiment_range_details.png
R doc/manual/source/_static/images/experiment_range_selector.png
R doc/manual/source/_static/images/experiment_range_selmanual.png
R doc/manual/source/_static/images/experiment_rotor.png
R doc/manual/source/_static/images/experiment_solutions.png
R doc/manual/source/_static/images/experiment_solutions_comments.png
R doc/manual/source/_static/images/experiment_speeds.png
R doc/manual/source/_static/images/experiment_submit.png
R doc/manual/source/_static/images/experiment_submit_details
R doc/manual/source/_static/images/experiment_upload.png
R doc/manual/source/_static/images/export_leg_1.png
R doc/manual/source/_static/images/export_leg_RA.png
R doc/manual/source/_static/images/export_leg_RI.png
R doc/manual/source/_static/images/export_leg_auc.png
R doc/manual/source/_static/images/export_leg_beck.png
R doc/manual/source/_static/images/export_legacy.png
R doc/manual/source/_static/images/fe_load_data.png
R doc/manual/source/_static/images/fe_load_model_distrib.png
R doc/manual/source/_static/images/fe_match.png
R doc/manual/source/_static/images/fe_match_3dplot.png
R doc/manual/source/_static/images/fe_match_adv.png
R doc/manual/source/_static/images/fe_match_all.png
R doc/manual/source/_static/images/fe_match_allct.png
R doc/manual/source/_static/images/fe_match_lddat1.png
R doc/manual/source/_static/images/fe_match_lddat2.png
R doc/manual/source/_static/images/fe_match_lddat3.png
R doc/manual/source/_static/images/fe_match_lddat4.png
R doc/manual/source/_static/images/fe_match_ra.png
R doc/manual/source/_static/images/fe_match_resplot.png
R doc/manual/source/_static/images/fe_match_sim1.png
R doc/manual/source/_static/images/fe_match_sim2.png
R doc/manual/source/_static/images/fe_match_sim3_1b.png
R doc/manual/source/_static/images/fe_match_sim3_1p.png
R doc/manual/source/_static/images/fe_match_sim3_2b.png
R doc/manual/source/_static/images/fe_match_sim3_2p.png
R doc/manual/source/_static/images/fe_match_sim3_3b.png
R doc/manual/source/_static/images/fe_match_sim3_4b.png
R doc/manual/source/_static/images/fe_match_sim3_5b.png
R doc/manual/source/_static/images/fe_match_sim3_5p.png
R doc/manual/source/_static/images/fe_match_sim3_6b.png
R doc/manual/source/_static/images/fe_match_sim3_7b.png
R doc/manual/source/_static/images/fe_match_sim3_8b.png
R doc/manual/source/_static/images/fe_match_sim4.png
R doc/manual/source/_static/images/fe_match_sim5.png
R doc/manual/source/_static/images/fe_match_sim6.png
R doc/manual/source/_static/images/fe_match_sim7.png
R doc/manual/source/_static/images/fe_match_simulated.png
R doc/manual/source/_static/images/fe_match_viewer.png
R doc/manual/source/_static/images/fe_sim-1.png
R doc/manual/source/_static/images/fe_sim-2.png
R doc/manual/source/_static/images/fit_men-editupd.png
R doc/manual/source/_static/images/fit_men-load.png
R doc/manual/source/_static/images/fit_men_bot.png
R doc/manual/source/_static/images/fit_meniscus.png
R doc/manual/source/_static/images/ga_initialize-o.png
R doc/manual/source/_static/images/ga_initialize-p.png
R doc/manual/source/_static/images/ga_initialize.png
R doc/manual/source/_static/images/ga_report-1.png
R doc/manual/source/_static/images/ga_report-2.png
R doc/manual/source/_static/images/ga_report-3.png
R doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/source/_static/images/gmp/automation/2dsa.png
R doc/manual/source/_static/images/gmp/automation/2dsa_it.png
R doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
R doc/manual/source/_static/images/gmp/automation/Aprofile.png
R doc/manual/source/_static/images/gmp/automation/analysis.png
R doc/manual/source/_static/images/gmp/automation/auto_edit.png
R doc/manual/source/_static/images/gmp/automation/bitmap.png
R doc/manual/source/_static/images/gmp/automation/cells.png
R doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
R doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
R doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
R doc/manual/source/_static/images/gmp/automation/lims.png
R doc/manual/source/_static/images/gmp/automation/main_window.png
R doc/manual/source/_static/images/gmp/automation/man_edit.png
R doc/manual/source/_static/images/gmp/automation/optics.png
R doc/manual/source/_static/images/gmp/automation/pcsa.png
R doc/manual/source/_static/images/gmp/automation/pcsa_report.png
R doc/manual/source/_static/images/gmp/automation/plot.png
R doc/manual/source/_static/images/gmp/automation/ranges.png
R doc/manual/source/_static/images/gmp/automation/report_editor.png
R doc/manual/source/_static/images/gmp/automation/rotor.png
R doc/manual/source/_static/images/gmp/automation/solutions.png
R doc/manual/source/_static/images/gmp/automation/speed.png
R doc/manual/source/_static/images/gmp/automation/submit.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/source/_static/images/gmp/gmp.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/source/_static/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
R doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
R doc/manual/source/_static/images/gmp/vhw_distribution.png
R doc/manual/source/_static/images/good_grid.png
R doc/manual/source/_static/images/grid-setup.png
R doc/manual/source/_static/images/grid_editor.png
R doc/manual/source/_static/images/grid_editor_multi_grids.png
R doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
R doc/manual/source/_static/images/grid_editor_mw_view.png
R doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
R doc/manual/source/_static/images/grid_editor_subgrid1-good.png
R doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
R doc/manual/source/_static/images/grid_editor_subgrid2-good.png
R doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
R doc/manual/source/_static/images/grid_editor_subgrid3-good.png
R doc/manual/source/_static/images/hori_cs.png
R doc/manual/source/_static/images/idist_comb_selPre.png
R doc/manual/source/_static/images/idist_comb_seldis.png
R doc/manual/source/_static/images/idist_combine.png
R doc/manual/source/_static/images/incr_sigmoid.png
R doc/manual/source/_static/images/load_auc-search.png
R doc/manual/source/_static/images/load_auc-trips.png
R doc/manual/source/_static/images/load_auc.png
R doc/manual/source/_static/images/load_colormap.png
R doc/manual/source/_static/images/load_model_dis-MID.png
R doc/manual/source/_static/images/load_model_distrib.png
R doc/manual/source/_static/images/load_noise.png
R doc/manual/source/_static/images/load_noise_details.png
R doc/manual/source/_static/images/manage_data.png
R doc/manual/source/_static/images/manage_data_bhide.png
R doc/manual/source/_static/images/manage_data_bshow.png
R doc/manual/source/_static/images/manage_data_cmenu-1.png
R doc/manual/source/_static/images/manage_data_cmenu-2.png
R doc/manual/source/_static/images/manage_data_conf.png
R doc/manual/source/_static/images/manage_data_exp.png
R doc/manual/source/_static/images/manage_data_pasw.png
R doc/manual/source/_static/images/manage_data_sync.png
R doc/manual/source/_static/images/manage_data_thelp-1.png
R doc/manual/source/_static/images/manage_data_thelp-2.png
R doc/manual/source/_static/images/master-pw.png
R doc/manual/source/_static/images/model_editor.png
R doc/manual/source/_static/images/mwlr_spectra_3d.png
R doc/manual/source/_static/images/mwlr_spectra_cont.png
R doc/manual/source/_static/images/mwlr_spectra_f.png
R doc/manual/source/_static/images/mwlr_spectra_o.png
R doc/manual/source/_static/images/mwlr_spectra_save.png
R doc/manual/source/_static/images/mwlr_view_3dplot.png
R doc/manual/source/_static/images/mwlr_view_load.png
R doc/manual/source/_static/images/mwlr_view_pltctrl.png
R doc/manual/source/_static/images/mwlr_viewer.png
R doc/manual/source/_static/images/mwlr_viewer_3d.png
R doc/manual/source/_static/images/mwlr_viewer_ctl.png
R doc/manual/source/_static/images/mwlr_viewer_wvl.png
R doc/manual/source/_static/images/mwlr_viewer_xwavl.png
R doc/manual/source/_static/images/noise_prompt.png
R doc/manual/source/_static/images/noise_vec_db.png
R doc/manual/source/_static/images/norm_gridplot.png
R doc/manual/source/_static/images/optima_config_edit.png
R doc/manual/source/_static/images/optima_config_new.png
R doc/manual/source/_static/images/optima_host_config.png
R doc/manual/source/_static/images/pcsa.png
R doc/manual/source/_static/images/pcsa_3dplot.png
R doc/manual/source/_static/images/pcsa_adv_control.png
R doc/manual/source/_static/images/pcsa_all.png
R doc/manual/source/_static/images/pcsa_analys-line.png
R doc/manual/source/_static/images/pcsa_analys-sigm.png
R doc/manual/source/_static/images/pcsa_bitmap.png
R doc/manual/source/_static/images/pcsa_controls_simulated.png
R doc/manual/source/_static/images/pcsa_main-c.png
R doc/manual/source/_static/images/pcsa_mline_sigm.png
R doc/manual/source/_static/images/pcsa_mline_str.png
R doc/manual/source/_static/images/pcsa_mline_unsim.png
R doc/manual/source/_static/images/pcsa_mlines-line1.png
R doc/manual/source/_static/images/pcsa_mlines-line2.png
R doc/manual/source/_static/images/pcsa_mlines-sigm1.png
R doc/manual/source/_static/images/pcsa_mlines-sigm2.png
R doc/manual/source/_static/images/pcsa_regul.png
R doc/manual/source/_static/images/pcsa_regul_sim.png
R doc/manual/source/_static/images/pcsa_report.png
R doc/manual/source/_static/images/pcsa_res_viewer.png
R doc/manual/source/_static/images/pcsa_resplot.png
R doc/manual/source/_static/images/pcsa_rpscan-auto.png
R doc/manual/source/_static/images/pcsa_rpscan-select.png
R doc/manual/source/_static/images/pcsa_rpscan.png
R doc/manual/source/_static/images/pcsa_rpscan_sim.png
R doc/manual/source/_static/images/pcsa_sigmoid_eq.png
R doc/manual/source/_static/images/pcsa_simulated.png
R doc/manual/source/_static/images/pline_dsig.png
R doc/manual/source/_static/images/pline_power.png
R doc/manual/source/_static/images/pline_stline.png
R doc/manual/source/_static/images/plot_controls.png
R doc/manual/source/_static/images/predict1.png
R doc/manual/source/_static/images/predict2-1.png
R doc/manual/source/_static/images/predict2.png
R doc/manual/source/_static/images/print.png
R doc/manual/source/_static/images/process_crash.png
R doc/manual/source/_static/images/process_crash2.png
R doc/manual/source/_static/images/pseudo3d_comb_rmv.png
R doc/manual/source/_static/images/pseudo3d_combine.png
R doc/manual/source/_static/images/register.png
R doc/manual/source/_static/images/report.png
R doc/manual/source/_static/images/reporter-cmenu.png
R doc/manual/source/_static/images/reporter-details.png
R doc/manual/source/_static/images/reporter-loadprof.png
R doc/manual/source/_static/images/reporter-save.png
R doc/manual/source/_static/images/reporter-saveprof.png
R doc/manual/source/_static/images/reporter-view.png
R doc/manual/source/_static/images/reporter-viewitem.png
R doc/manual/source/_static/images/reporter.png
R doc/manual/source/_static/images/residualplot.png
R doc/manual/source/_static/images/residuals.png
R doc/manual/source/_static/images/rmsd_query-c.png
R doc/manual/source/_static/images/rmsd_query-o.png
R doc/manual/source/_static/images/rotor-add.png
R doc/manual/source/_static/images/rotor-save-calibration.png
R doc/manual/source/_static/images/rotor.png
R doc/manual/source/_static/images/rotorstretch-0.png
R doc/manual/source/_static/images/rotorstretch-1.png
R doc/manual/source/_static/images/rotorstretch-2.png
R doc/manual/source/_static/images/rotorstretch-3.png
R doc/manual/source/_static/images/rotorstretch-4.png
R doc/manual/source/_static/images/rotorstretch-5.png
R doc/manual/source/_static/images/rotorstretch-6.png
R doc/manual/source/_static/images/rotorstretch-7.png
R doc/manual/source/_static/images/rotorstretch_report.png
R doc/manual/source/_static/images/run_details.png
R doc/manual/source/_static/images/s20W_bar.png
R doc/manual/source/_static/images/sassoc.png
R doc/manual/source/_static/images/save_colormap.png
R doc/manual/source/_static/images/second_moment.png
R doc/manual/source/_static/images/select_edits.png
R doc/manual/source/_static/images/select_runs.png
R doc/manual/source/_static/images/sequence.png
R doc/manual/source/_static/images/set-zvalue.png
R doc/manual/source/_static/images/simparams.png
R doc/manual/source/_static/images/simulatedReport.png
R doc/manual/source/_static/images/solution_edit.png
R doc/manual/source/_static/images/solution_new.png
R doc/manual/source/_static/images/solution_select.png
R doc/manual/source/_static/images/solution_settings.png
R doc/manual/source/_static/images/somo/somo_icon.png
R doc/manual/source/_static/images/spectrum_extinction.png
R doc/manual/source/_static/images/sw_spectrum.png
R doc/manual/source/_static/images/time_derivative.png
R doc/manual/source/_static/images/timestate-0.png
R doc/manual/source/_static/images/timestate-1.png
R doc/manual/source/_static/images/timestate-2.png
R doc/manual/source/_static/images/timestate-3.png
R doc/manual/source/_static/images/timestate-4.png
R doc/manual/source/_static/images/ultra.xpm
R doc/manual/source/_static/images/ultrascan3.png
R doc/manual/source/_static/images/upload_fit_spectrum.png
R doc/manual/source/_static/images/us_buffer.png
R doc/manual/source/_static/images/us_buffer_spect.png
R doc/manual/source/_static/images/us_conv-RA.png
R doc/manual/source/_static/images/us_convert/us_convert_01.png
R doc/manual/source/_static/images/us_convert/us_convert_02.png
R doc/manual/source/_static/images/us_convert/us_convert_03.png
R doc/manual/source/_static/images/us_convert/us_convert_04.png
R doc/manual/source/_static/images/us_convert/us_convert_05.png
R doc/manual/source/_static/images/us_convert/us_convert_06.png
R doc/manual/source/_static/images/us_convert/us_convert_07.png
R doc/manual/source/_static/images/us_convert/us_convert_08.png
R doc/manual/source/_static/images/us_convert/us_convert_09.png
R doc/manual/source/_static/images/us_convert/us_convert_10.png
R doc/manual/source/_static/images/us_convert/us_convert_11.png
R doc/manual/source/_static/images/us_convert/us_convert_12.png
R doc/manual/source/_static/images/us_convert/us_convert_13.png
R doc/manual/source/_static/images/us_convert/us_convert_14.png
R doc/manual/source/_static/images/us_convert_01.png
R doc/manual/source/_static/images/us_convert_02.png
R doc/manual/source/_static/images/us_convert_03.png
R doc/manual/source/_static/images/us_convert_04.png
R doc/manual/source/_static/images/us_convert_05.png
R doc/manual/source/_static/images/us_convert_06.png
R doc/manual/source/_static/images/us_convert_07.png
R doc/manual/source/_static/images/us_convert_08.png
R doc/manual/source/_static/images/us_convert_09.png
R doc/manual/source/_static/images/us_convert_10.png
R doc/manual/source/_static/images/us_convert_11.png
R doc/manual/source/_static/images/us_convert_12.png
R doc/manual/source/_static/images/us_convert_13.png
R doc/manual/source/_static/images/us_convert_14.png
R doc/manual/source/_static/images/us_convert_definedscans.png
R doc/manual/source/_static/images/us_convert_definesubset.png
R doc/manual/source/_static/images/us_edit.png
R doc/manual/source/_static/images/us_edit_mwl.png
R doc/manual/source/_static/images/us_equiltime.png
R doc/manual/source/_static/images/us_extinction-0.png
R doc/manual/source/_static/images/us_extinction-00.png
R doc/manual/source/_static/images/us_extinction-000.png
R doc/manual/source/_static/images/us_extinction-1.png
R doc/manual/source/_static/images/us_extinction-2.png
R doc/manual/source/_static/images/us_extinction-3.png
R doc/manual/source/_static/images/us_fds_filemanager-0.png
R doc/manual/source/_static/images/us_fds_filemanager-1.png
R doc/manual/source/_static/images/us_fds_filemanager-2.png
R doc/manual/source/_static/images/us_fds_filemanager-3.png
R doc/manual/source/_static/images/us_fds_filemanager-4.png
R doc/manual/source/_static/images/us_investigator-2.png
R doc/manual/source/_static/images/us_investigator.png
R doc/manual/source/_static/images/us_modelmetrics-0.png
R doc/manual/source/_static/images/us_modmet_report.png
R doc/manual/source/_static/images/us_project.png
R doc/manual/source/_static/images/us_project1.png
R doc/manual/source/_static/images/us_project2.png
R doc/manual/source/_static/images/us_project3.png
R doc/manual/source/_static/images/us_project_add-supdata.png
R doc/manual/source/_static/images/us_project_edit-supdata.png
R doc/manual/source/_static/images/us_project_web.png
R doc/manual/source/_static/images/us_project_webed.png
R doc/manual/source/_static/images/us_solution1.png
R doc/manual/source/_static/images/us_solution2.png
R doc/manual/source/_static/images/us_solution3.png
R doc/manual/source/_static/images/us_spectrum-0.png
R doc/manual/source/_static/images/us_spectrum-1.png
R doc/manual/source/_static/images/us_spectrum-load.png
R doc/manual/source/_static/images/usfont-1.png
R doc/manual/source/_static/images/usfont-2.png
R doc/manual/source/_static/images/vhw_combine-combo.png
R doc/manual/source/_static/images/vhw_combine-envel.png
R doc/manual/source/_static/images/vhw_combine-selrun.png
R doc/manual/source/_static/images/vhw_combine.png
R doc/manual/source/_static/images/vhw_distribution.png
R doc/manual/source/_static/images/vhw_enh_groups.png
R doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
R doc/manual/source/_static/images/vhw_enh_groups_res.png
R doc/manual/source/_static/images/vhw_enhanced.png
R doc/manual/source/_static/images/vhw_histogram.png
R doc/manual/source/_static/images/xpn_viewer-loaded.png
R doc/manual/source/_static/images/xpn_viewer-saved.png
R doc/manual/source/_static/images/xpn_viewer.png
R doc/manual/source/_static/images/zvalue_eq.png
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
R doc/manual/source/_static/language_data.js
R doc/manual/source/_static/sphinx_highlight.js
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/analyte/index.rst
M doc/manual/source/associations.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/beckman_openauc.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buffer/index.rst
M doc/manual/source/colorgradient.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/ddist_combine.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/index.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/fit_meniscus.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp.rst
M doc/manual/source/gmp/gmp_audit_trail.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/gmp/gmp_report_generator.rst
M doc/manual/source/gmp/gmp_signature.rst
M doc/manual/source/gmp/index.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/idist_combine.rst
A doc/manual/source/images/2dsa_3dplot.png
A doc/manual/source/images/2dsa_advan.png
A doc/manual/source/images/2dsa_analvv.png
A doc/manual/source/images/2dsa_analys.png
A doc/manual/source/images/2dsa_main-c.png
A doc/manual/source/images/2dsa_main-o.png
A doc/manual/source/images/2dsa_resplot.png
A doc/manual/source/images/D20W_bar.png
A doc/manual/source/images/MW-bar.png
A doc/manual/source/images/RINplot.png
A doc/manual/source/images/TINplot.png
A doc/manual/source/images/UltraScan-logo.png
A doc/manual/source/images/add_RIN-TIN.png
A doc/manual/source/images/add_RIN.png
A doc/manual/source/images/add_TIN.png
A doc/manual/source/images/advanced_config.png
A doc/manual/source/images/analyte_details.png
A doc/manual/source/images/analyte_edit.png
A doc/manual/source/images/analyte_edit_spec.png
A doc/manual/source/images/analyte_new_sequence.png
A doc/manual/source/images/analyte_newc.png
A doc/manual/source/images/analyte_newd.png
A doc/manual/source/images/analyte_newp.png
A doc/manual/source/images/analyte_selectc.png
A doc/manual/source/images/analyte_selectd.png
A doc/manual/source/images/analyte_selectp.png
A doc/manual/source/images/analyte_sequence.png
A doc/manual/source/images/analyte_settings.png
A doc/manual/source/images/analyte_spec-gui.png
A doc/manual/source/images/analyte_specmenu.png
A doc/manual/source/images/analyte_spectrum.png
A doc/manual/source/images/analytes.png
A doc/manual/source/images/associations.png
A doc/manual/source/images/astfem_sim.png
A doc/manual/source/images/bad_grid.png
A doc/manual/source/images/beck_convert-2.png
A doc/manual/source/images/beck_converter.png
A doc/manual/source/images/bitmap.png
A doc/manual/source/images/buffer_edit.png
A doc/manual/source/images/buffer_edit_setting.png
A doc/manual/source/images/buffer_edit_spectrum.png
A doc/manual/source/images/buffer_info.png
A doc/manual/source/images/buffer_manage_spectrum.png
A doc/manual/source/images/buffer_new.png
A doc/manual/source/images/buffer_new_spectrum.png
A doc/manual/source/images/buffer_select.png
A doc/manual/source/images/buffer_settings.png
A doc/manual/source/images/buffer_spectrum.png
A doc/manual/source/images/cfa_view-loadauc.png
A doc/manual/source/images/cfa_view-loadraw.png
A doc/manual/source/images/cfa_view-main.png
A doc/manual/source/images/cfa_view-statsauc.png
A doc/manual/source/images/cfa_view-statsraw.png
A doc/manual/source/images/color-1.png
A doc/manual/source/images/color-2.png
A doc/manual/source/images/color-a.png
A doc/manual/source/images/color-b.png
A doc/manual/source/images/colorgrad1.png
A doc/manual/source/images/colorgradient/col1_colgen.png
A doc/manual/source/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/images/colorgradient/col2_colgen.png
A doc/manual/source/images/colorgradient/colorgrad.png
A doc/manual/source/images/colorgradient/colorgradient_main.png
A doc/manual/source/images/colorgradient/components.png
A doc/manual/source/images/colorgradient/model_editor.png
A doc/manual/source/images/combine_models-idedit.png
A doc/manual/source/images/combine_models-save.png
A doc/manual/source/images/combine_models.png
A doc/manual/source/images/components.png
A doc/manual/source/images/config.png
A doc/manual/source/images/config1.png
A doc/manual/source/images/config2.png
A doc/manual/source/images/config_plot.png
A doc/manual/source/images/convert-RIdata.png
A doc/manual/source/images/convert-exclude.png
A doc/manual/source/images/convert-experiment.png
A doc/manual/source/images/convert-mwl.png
A doc/manual/source/images/convert-seltrip.png
A doc/manual/source/images/convert-subset.png
A doc/manual/source/images/convert-tolerance.png
A doc/manual/source/images/convert.png
A doc/manual/source/images/custom_grid-1.png
A doc/manual/source/images/custom_grid.png
A doc/manual/source/images/data_converter.png
A doc/manual/source/images/data_loader-edits.png
A doc/manual/source/images/data_loader-trips.png
A doc/manual/source/images/data_loader.png
A doc/manual/source/images/database.png
A doc/manual/source/images/ddist_combine-selrun.png
A doc/manual/source/images/ddist_combine.png
A doc/manual/source/images/densmatch_main.png
A doc/manual/source/images/densmatch_mpars_completed.png
A doc/manual/source/images/densmatch_mpars_empty.png
A doc/manual/source/images/densmatch_rmvmodels.png
A doc/manual/source/images/edit_buffer_spec_menu.png
A doc/manual/source/images/eq1-mean.png
A doc/manual/source/images/eq2-skew.png
A doc/manual/source/images/eq3-kurtosis.png
A doc/manual/source/images/eq4-moments.png
A doc/manual/source/images/eq5-variance.png
A doc/manual/source/images/eq6-stddev.png
A doc/manual/source/images/eq7-probsigma.png
A doc/manual/source/images/eq8-confidence.png
A doc/manual/source/images/experiment_cells.png
A doc/manual/source/images/experiment_general.png
A doc/manual/source/images/experiment_optics.png
A doc/manual/source/images/experiment_overview.png
A doc/manual/source/images/experiment_photomult.png
A doc/manual/source/images/experiment_range.png
A doc/manual/source/images/experiment_range_details.png
A doc/manual/source/images/experiment_range_selector.png
A doc/manual/source/images/experiment_range_selmanual.png
A doc/manual/source/images/experiment_rotor.png
A doc/manual/source/images/experiment_solutions.png
A doc/manual/source/images/experiment_solutions_comments.png
A doc/manual/source/images/experiment_speeds.png
A doc/manual/source/images/experiment_submit.png
A doc/manual/source/images/experiment_submit_details.png
A doc/manual/source/images/experiment_upload.png
A doc/manual/source/images/export_leg_1.png
A doc/manual/source/images/export_leg_RA.png
A doc/manual/source/images/export_leg_RI.png
A doc/manual/source/images/export_leg_auc.png
A doc/manual/source/images/export_leg_beck.png
A doc/manual/source/images/export_legacy.png
A doc/manual/source/images/fe_load_data.png
A doc/manual/source/images/fe_load_model_distrib.png
A doc/manual/source/images/fe_match.png
A doc/manual/source/images/fe_match_3dplot.png
A doc/manual/source/images/fe_match_adv.png
A doc/manual/source/images/fe_match_all.png
A doc/manual/source/images/fe_match_allct.png
A doc/manual/source/images/fe_match_lddat1.png
A doc/manual/source/images/fe_match_lddat2.png
A doc/manual/source/images/fe_match_lddat3.png
A doc/manual/source/images/fe_match_lddat4.png
A doc/manual/source/images/fe_match_ra.png
A doc/manual/source/images/fe_match_resplot.png
A doc/manual/source/images/fe_match_sim1.png
A doc/manual/source/images/fe_match_sim2.png
A doc/manual/source/images/fe_match_sim3_1b.png
A doc/manual/source/images/fe_match_sim3_1p.png
A doc/manual/source/images/fe_match_sim3_2b.png
A doc/manual/source/images/fe_match_sim3_2p.png
A doc/manual/source/images/fe_match_sim3_3b.png
A doc/manual/source/images/fe_match_sim3_4b.png
A doc/manual/source/images/fe_match_sim3_5b.png
A doc/manual/source/images/fe_match_sim3_5p.png
A doc/manual/source/images/fe_match_sim3_6b.png
A doc/manual/source/images/fe_match_sim3_7b.png
A doc/manual/source/images/fe_match_sim3_8b.png
A doc/manual/source/images/fe_match_sim4.png
A doc/manual/source/images/fe_match_sim5.png
A doc/manual/source/images/fe_match_sim6.png
A doc/manual/source/images/fe_match_sim7.png
A doc/manual/source/images/fe_match_simulated.png
A doc/manual/source/images/fe_match_viewer.png
A doc/manual/source/images/fe_sim-1.png
A doc/manual/source/images/fe_sim-2.png
A doc/manual/source/images/fit_men-editupd.png
A doc/manual/source/images/fit_men-load.png
A doc/manual/source/images/fit_men_bot.png
A doc/manual/source/images/fit_meniscus.png
A doc/manual/source/images/ga_initialize-o.png
A doc/manual/source/images/ga_initialize-p.png
A doc/manual/source/images/ga_initialize.png
A doc/manual/source/images/ga_report-1.png
A doc/manual/source/images/ga_report-2.png
A doc/manual/source/images/ga_report-3.png
A doc/manual/source/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/images/gmp/automation/2dsa.png
A doc/manual/source/images/gmp/automation/2dsa_it.png
A doc/manual/source/images/gmp/automation/2dsa_mc.png
A doc/manual/source/images/gmp/automation/Aprofile.png
A doc/manual/source/images/gmp/automation/analysis.png
A doc/manual/source/images/gmp/automation/auto_edit.png
A doc/manual/source/images/gmp/automation/bitmap.png
A doc/manual/source/images/gmp/automation/cells.png
A doc/manual/source/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/images/gmp/automation/lims.png
A doc/manual/source/images/gmp/automation/main_window.png
A doc/manual/source/images/gmp/automation/man_edit.png
A doc/manual/source/images/gmp/automation/optics.png
A doc/manual/source/images/gmp/automation/pcsa.png
A doc/manual/source/images/gmp/automation/pcsa_report.png
A doc/manual/source/images/gmp/automation/plot.png
A doc/manual/source/images/gmp/automation/ranges.png
A doc/manual/source/images/gmp/automation/report_editor.png
A doc/manual/source/images/gmp/automation/rotor.png
A doc/manual/source/images/gmp/automation/solutions.png
A doc/manual/source/images/gmp/automation/speed.png
A doc/manual/source/images/gmp/automation/submit.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/images/gmp/gmp.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_01.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_02.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_03.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_04.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_05.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_06.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_07.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_08.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_09.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_10.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_11.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_12.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_13.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_14.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_15.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_16.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_17.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_18.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_19.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_20.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_21.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_22.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_23.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_24.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_25.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_26.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_27.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_28.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_29.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_30.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_31.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_32.png
A doc/manual/source/images/gmp/protocol_development/protocol_development_33.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/images/gmp/vhw_distribution.png
A doc/manual/source/images/good_grid.png
A doc/manual/source/images/grid-setup.png
A doc/manual/source/images/grid_editor.png
A doc/manual/source/images/grid_editor_multi_grids.png
A doc/manual/source/images/grid_editor_multi_grids_sed.png
A doc/manual/source/images/grid_editor_mw_view.png
A doc/manual/source/images/grid_editor_subgrid1-bad.png
A doc/manual/source/images/grid_editor_subgrid1-good.png
A doc/manual/source/images/grid_editor_subgrid2-bad.png
A doc/manual/source/images/grid_editor_subgrid2-good.png
A doc/manual/source/images/grid_editor_subgrid3-bad.png
A doc/manual/source/images/grid_editor_subgrid3-good.png
A doc/manual/source/images/hori_cs.png
A doc/manual/source/images/idist_comb_selPre.png
A doc/manual/source/images/idist_comb_seldis.png
A doc/manual/source/images/idist_combine.png
A doc/manual/source/images/incr_sigmoid.png
A doc/manual/source/images/load_auc-search.png
A doc/manual/source/images/load_auc-trips.png
A doc/manual/source/images/load_auc.png
A doc/manual/source/images/load_colormap.png
A doc/manual/source/images/load_model_dis-MID.png
A doc/manual/source/images/load_model_distrib.png
A doc/manual/source/images/load_noise.png
A doc/manual/source/images/load_noise_details.png
A doc/manual/source/images/manage_data.png
A doc/manual/source/images/manage_data_bhide.png
A doc/manual/source/images/manage_data_bshow.png
A doc/manual/source/images/manage_data_cmenu-1.png
A doc/manual/source/images/manage_data_cmenu-2.png
A doc/manual/source/images/manage_data_conf.png
A doc/manual/source/images/manage_data_exp.png
A doc/manual/source/images/manage_data_pasw.png
A doc/manual/source/images/manage_data_sync.png
A doc/manual/source/images/manage_data_thelp-1.png
A doc/manual/source/images/manage_data_thelp-2.png
A doc/manual/source/images/master-pw.png
A doc/manual/source/images/model_editor.png
A doc/manual/source/images/mwlr_spectra_3d.png
A doc/manual/source/images/mwlr_spectra_cont.png
A doc/manual/source/images/mwlr_spectra_f.png
A doc/manual/source/images/mwlr_spectra_o.png
A doc/manual/source/images/mwlr_spectra_save.png
A doc/manual/source/images/mwlr_view_3dplot.png
A doc/manual/source/images/mwlr_view_load.png
A doc/manual/source/images/mwlr_view_pltctrl.png
A doc/manual/source/images/mwlr_viewer.png
A doc/manual/source/images/mwlr_viewer_3d.png
A doc/manual/source/images/mwlr_viewer_ctl.png
A doc/manual/source/images/mwlr_viewer_wvl.png
A doc/manual/source/images/mwlr_viewer_xwavl.png
A doc/manual/source/images/noise_prompt.png
A doc/manual/source/images/noise_vec_db.png
A doc/manual/source/images/norm_gridplot.png
A doc/manual/source/images/optima_config_edit.png
A doc/manual/source/images/optima_config_new.png
A doc/manual/source/images/optima_host_config.png
A doc/manual/source/images/pcsa.png
A doc/manual/source/images/pcsa_3dplot.png
A doc/manual/source/images/pcsa_adv_control.png
A doc/manual/source/images/pcsa_all.png
A doc/manual/source/images/pcsa_analys-line.png
A doc/manual/source/images/pcsa_analys-sigm.png
A doc/manual/source/images/pcsa_bitmap.png
A doc/manual/source/images/pcsa_controls_simulated.png
A doc/manual/source/images/pcsa_main-c.png
A doc/manual/source/images/pcsa_mline_sigm.png
A doc/manual/source/images/pcsa_mline_str.png
A doc/manual/source/images/pcsa_mline_unsim.png
A doc/manual/source/images/pcsa_mlines-line1.png
A doc/manual/source/images/pcsa_mlines-line2.png
A doc/manual/source/images/pcsa_mlines-sigm1.png
A doc/manual/source/images/pcsa_mlines-sigm2.png
A doc/manual/source/images/pcsa_regul.png
A doc/manual/source/images/pcsa_regul_sim.png
A doc/manual/source/images/pcsa_report.png
A doc/manual/source/images/pcsa_res_viewer.png
A doc/manual/source/images/pcsa_resplot.png
A doc/manual/source/images/pcsa_rpscan-auto.png
A doc/manual/source/images/pcsa_rpscan-select.png
A doc/manual/source/images/pcsa_rpscan.png
A doc/manual/source/images/pcsa_rpscan_sim.png
A doc/manual/source/images/pcsa_sigmoid_eq.png
A doc/manual/source/images/pcsa_simulated.png
A doc/manual/source/images/pline_dsig.png
A doc/manual/source/images/pline_power.png
A doc/manual/source/images/pline_stline.png
A doc/manual/source/images/plot_controls.png
A doc/manual/source/images/predict1.png
A doc/manual/source/images/predict2-1.png
A doc/manual/source/images/predict2.png
A doc/manual/source/images/print.png
A doc/manual/source/images/process_crash.png
A doc/manual/source/images/process_crash2.png
A doc/manual/source/images/pseudo3d_comb_rmv.png
A doc/manual/source/images/pseudo3d_combine.png
A doc/manual/source/images/register.png
A doc/manual/source/images/report.png
A doc/manual/source/images/reporter-cmenu.png
A doc/manual/source/images/reporter-details.png
A doc/manual/source/images/reporter-loadprof.png
A doc/manual/source/images/reporter-save.png
A doc/manual/source/images/reporter-saveprof.png
A doc/manual/source/images/reporter-view.png
A doc/manual/source/images/reporter-viewitem.png
A doc/manual/source/images/reporter.png
A doc/manual/source/images/residualplot.png
A doc/manual/source/images/residuals.png
A doc/manual/source/images/rmsd_query-c.png
A doc/manual/source/images/rmsd_query-o.png
A doc/manual/source/images/rotor-add.png
A doc/manual/source/images/rotor-save-calibration.png
A doc/manual/source/images/rotor.png
A doc/manual/source/images/rotorstretch-0.png
A doc/manual/source/images/rotorstretch-1.png
A doc/manual/source/images/rotorstretch-2.png
A doc/manual/source/images/rotorstretch-3.png
A doc/manual/source/images/rotorstretch-4.png
A doc/manual/source/images/rotorstretch-5.png
A doc/manual/source/images/rotorstretch-6.png
A doc/manual/source/images/rotorstretch-7.png
A doc/manual/source/images/rotorstretch_report.png
A doc/manual/source/images/run_details.png
A doc/manual/source/images/s20W_bar.png
A doc/manual/source/images/sassoc.png
A doc/manual/source/images/save_colormap.png
A doc/manual/source/images/second_moment.png
A doc/manual/source/images/select_edits.png
A doc/manual/source/images/select_runs.png
A doc/manual/source/images/sequence.png
A doc/manual/source/images/set-zvalue.png
A doc/manual/source/images/simparams.png
A doc/manual/source/images/simulatedReport.png
A doc/manual/source/images/solution_edit.png
A doc/manual/source/images/solution_new.png
A doc/manual/source/images/solution_select.png
A doc/manual/source/images/solution_settings.png
A doc/manual/source/images/somo/somo_icon.png
A doc/manual/source/images/spectrum_extinction.png
A doc/manual/source/images/sw_spectrum.png
A doc/manual/source/images/time_derivative.png
A doc/manual/source/images/timestate-0.png
A doc/manual/source/images/timestate-1.png
A doc/manual/source/images/timestate-2.png
A doc/manual/source/images/timestate-3.png
A doc/manual/source/images/timestate-4.png
A doc/manual/source/images/ultra.xpm
A doc/manual/source/images/ultrascan3.png
A doc/manual/source/images/upload_fit_spectrum.png
A doc/manual/source/images/us_buffer.png
A doc/manual/source/images/us_buffer_spect.png
A doc/manual/source/images/us_conv-RA.png
A doc/manual/source/images/us_convert/us_convert_01.png
A doc/manual/source/images/us_convert/us_convert_02.png
A doc/manual/source/images/us_convert/us_convert_03.png
A doc/manual/source/images/us_convert/us_convert_04.png
A doc/manual/source/images/us_convert/us_convert_05.png
A doc/manual/source/images/us_convert/us_convert_06.png
A doc/manual/source/images/us_convert/us_convert_07.png
A doc/manual/source/images/us_convert/us_convert_08.png
A doc/manual/source/images/us_convert/us_convert_09.png
A doc/manual/source/images/us_convert/us_convert_10.png
A doc/manual/source/images/us_convert/us_convert_11.png
A doc/manual/source/images/us_convert/us_convert_12.png
A doc/manual/source/images/us_convert/us_convert_13.png
A doc/manual/source/images/us_convert/us_convert_14.png
A doc/manual/source/images/us_convert_01.png
A doc/manual/source/images/us_convert_02.png
A doc/manual/source/images/us_convert_03.png
A doc/manual/source/images/us_convert_04.png
A doc/manual/source/images/us_convert_05.png
A doc/manual/source/images/us_convert_06.png
A doc/manual/source/images/us_convert_07.png
A doc/manual/source/images/us_convert_08.png
A doc/manual/source/images/us_convert_09.png
A doc/manual/source/images/us_convert_10.png
A doc/manual/source/images/us_convert_11.png
A doc/manual/source/images/us_convert_12.png
A doc/manual/source/images/us_convert_13.png
A doc/manual/source/images/us_convert_14.png
A doc/manual/source/images/us_convert_definedscans.png
A doc/manual/source/images/us_convert_definesubset.png
A doc/manual/source/images/us_edit.png
A doc/manual/source/images/us_edit_mwl.png
A doc/manual/source/images/us_equiltime.png
A doc/manual/source/images/us_extinction-0.png
A doc/manual/source/images/us_extinction-00.png
A doc/manual/source/images/us_extinction-000.png
A doc/manual/source/images/us_extinction-1.png
A doc/manual/source/images/us_extinction-2.png
A doc/manual/source/images/us_extinction-3.png
A doc/manual/source/images/us_fds_filemanager-0.png
A doc/manual/source/images/us_fds_filemanager-1.png
A doc/manual/source/images/us_fds_filemanager-2.png
A doc/manual/source/images/us_fds_filemanager-3.png
A doc/manual/source/images/us_fds_filemanager-4.png
A doc/manual/source/images/us_investigator-2.png
A doc/manual/source/images/us_investigator.png
A doc/manual/source/images/us_modelmetrics-0.png
A doc/manual/source/images/us_modmet_report.png
A doc/manual/source/images/us_project.png
A doc/manual/source/images/us_project1.png
A doc/manual/source/images/us_project2.png
A doc/manual/source/images/us_project3.png
A doc/manual/source/images/us_project_add-supdata.png
A doc/manual/source/images/us_project_edit-supdata.png
A doc/manual/source/images/us_project_web.png
A doc/manual/source/images/us_project_webed.png
A doc/manual/source/images/us_solution1.png
A doc/manual/source/images/us_solution2.png
A doc/manual/source/images/us_solution3.png
A doc/manual/source/images/us_spectrum-0.png
A doc/manual/source/images/us_spectrum-1.png
A doc/manual/source/images/us_spectrum-load.png
A doc/manual/source/images/usfont-1.png
A doc/manual/source/images/usfont-2.png
A doc/manual/source/images/vhw_combine-combo.png
A doc/manual/source/images/vhw_combine-envel.png
A doc/manual/source/images/vhw_combine-selrun.png
A doc/manual/source/images/vhw_combine.png
A doc/manual/source/images/vhw_distribution.png
A doc/manual/source/images/vhw_enh_groups.png
A doc/manual/source/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/images/vhw_enh_groups_res.png
A doc/manual/source/images/vhw_enhanced.png
A doc/manual/source/images/vhw_histogram.png
A doc/manual/source/images/xpn_viewer-loaded.png
A doc/manual/source/images/xpn_viewer-saved.png
A doc/manual/source/images/xpn_viewer.png
A doc/manual/source/images/zvalue_eq.png
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/mwl_spectra.rst
M doc/manual/source/mwlr_viewer.rst
M doc/manual/source/pcsa/index.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_mlines.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pcsa/pcsa_rpscan.rst
M doc/manual/source/predict1.rst
M doc/manual/source/predict2.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/register.rst
M doc/manual/source/reporter.rst
M doc/manual/source/requirements.txt
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/rotor_calibration.rst
M doc/manual/source/run_details.rst
M doc/manual/source/sassoc.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/simparams.rst
M doc/manual/source/solutions/index.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/temp.txt
M doc/manual/source/time_derivative.rst
M doc/manual/source/tmst_viewer.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/us_extinction.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/us_investigator.rst
M doc/manual/source/us_modelmetrics.rst
M doc/manual/source/us_project.rst
M doc/manual/source/us_spectrum.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_distrib_plot.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
fix: change qthelp url to use manual instead of doc, use right project structure for images and update links
Commit: dd6f8d6767fa98ae4f35d21e7e5411f7f1f1eb17
https://github.com/ehb54/ultrascan3/commit/dd6f8d6767fa98ae4f35d21e7e5411f7f1f1eb17
Author: Saeed <samo38:github>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
use Microsoft format, add overlap function
Commit: e9f9ae1d960fb6e262803ee6b522247b68cf8894
https://github.com/ehb54/ultrascan3/commit/e9f9ae1d960fb6e262803ee6b522247b68cf8894
Author: Saeed <samo38:github>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M gui/us_spectrodata.h
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M test/utils/test_us_crypto.cpp
M utils/libus_utils.pro
M utils/us_crypto.cpp
M utils/us_crypto.h
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_747
Commit: b33c9b1cddd853e103542e10c4328830fc59e944
https://github.com/ehb54/ultrascan3/commit/b33c9b1cddd853e103542e10c4328830fc59e944
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M doc/manual/CMakeLists.txt
R doc/manual/StageAssistant.cmake
M programs/us/CMakeLists.txt
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
mod: windows and macos qt assistant fix
Commit: adb74a9f1e5a1e238c264228544137f56a4125b5
https://github.com/ehb54/ultrascan3/commit/adb74a9f1e5a1e238c264228544137f56a4125b5
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
M scripts/build.ps1
Log Message:
-----------
fix: builddir set at the beginning
Commit: cea2ea0e77baf6dbcc9097b3062ede36ca70f800
https://github.com/ehb54/ultrascan3/commit/cea2ea0e77baf6dbcc9097b3062ede36ca70f800
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
M CMakeLists.txt
M doc/manual/CMakeLists.txt
M scripts/build.ps1
Log Message:
-----------
fix: windows path issues
Commit: 99a443309500f6d44fde4d4ba640770dfadeec24
https://github.com/ehb54/ultrascan3/commit/99a443309500f6d44fde4d4ba640770dfadeec24
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-06 (Fri, 06 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M doc/manual/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_helpdaemon/us_helpdaemon.cpp
Log Message:
-----------
fix: windows missing dll
Commit: 32f3fd93bf886595a3d9b9b0335a74cf5645913a
https://github.com/ehb54/ultrascan3/commit/32f3fd93bf886595a3d9b9b0335a74cf5645913a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M utils/us_xpn_data.cpp
Log Message:
-----------
Initialize `tsobj` with `TIMESTATE_TYPE::ORIGINAL` in `US_TimeState`.
Commit: f6095ff611d0c2f9f6a04567e6f2a74535dd45fd
https://github.com/ehb54/ultrascan3/commit/f6095ff611d0c2f9f6a04567e6f2a74535dd45fd
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M utils/us_xpn_data.cpp
Log Message:
-----------
Initialize `tsobj` with `TIMESTATE_TYPE::ORIGINAL` in `us_xpn_data`.
Commit: 399ad6ee7636d4885c37adff02b723d1e6af48c9
https://github.com/ehb54/ultrascan3/commit/399ad6ee7636d4885c37adff02b723d1e6af48c9
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
M scripts/build.sh
M utils/CMakeLists.txt
Log Message:
-----------
add: linux cmake packaging
Commit: c3215226c1e826bd7c620115a98fe3694cfe771e
https://github.com/ehb54/ultrascan3/commit/c3215226c1e826bd7c620115a98fe3694cfe771e
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M scripts/build.sh
M utils/us_memory.cpp
Log Message:
-----------
fix: cross platform page size
Commit: 16d1f75e51f11ad87c8f18b11e0a8a2bb755ea44
https://github.com/ehb54/ultrascan3/commit/16d1f75e51f11ad87c8f18b11e0a8a2bb755ea44
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M scripts/build.ps1
M scripts/build.sh
M vcpkg.json
Log Message:
-----------
fix: assistant on linux
Commit: 4cff648f9ba827db6e67e9cedb1a93953e8a0f76
https://github.com/ehb54/ultrascan3/commit/4cff648f9ba827db6e67e9cedb1a93953e8a0f76
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M test/utils/test_us_time_state.cpp
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge pull request #384 from ehb54/lukas/timestate
Add TIMESTATE_TYPE and IMPORT_TYPE support with refactorings
Commit: 5ab554ce68ae411774740695115c51b480df8c8a
https://github.com/ehb54/ultrascan3/commit/5ab554ce68ae411774740695115c51b480df8c8a
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
fix: vcpkg cache clear
Commit: a8b6e9963d8ed447dc737af6b4e3b69c3894945f
https://github.com/ehb54/ultrascan3/commit/a8b6e9963d8ed447dc737af6b4e3b69c3894945f
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
fix: vcpkg cache clear fix
Commit: 19f656eb532b2218880402623455153763d66d50
https://github.com/ehb54/ultrascan3/commit/19f656eb532b2218880402623455153763d66d50
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
Log Message:
-----------
fix: assistant now copied to bin on dev build
Commit: 75e0dc23de6fbdd330b322115c640d973e916d02
https://github.com/ehb54/ultrascan3/commit/75e0dc23de6fbdd330b322115c640d973e916d02
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
Log Message:
-----------
fix: assistant find update
Commit: 57f162e692e1a548bb426454e7e768e6f68b1bc4
https://github.com/ehb54/ultrascan3/commit/57f162e692e1a548bb426454e7e768e6f68b1bc4
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
M programs/us/us.cpp
Log Message:
-----------
fix: program path issue
Commit: 4700970e14e8ef1bf44b3fe91efd8dbcd15ba544
https://github.com/ehb54/ultrascan3/commit/4700970e14e8ef1bf44b3fe91efd8dbcd15ba544
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
Log Message:
-----------
fix: assistant not found
Commit: 14d6c7e63b928fb3a73559fdafa9426502eda98c
https://github.com/ehb54/ultrascan3/commit/14d6c7e63b928fb3a73559fdafa9426502eda98c
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
fix: guard specific macos required tools
Commit: 1c6be4ed0464373db7a5a1a6a780f17bc12dbcf5
https://github.com/ehb54/ultrascan3/commit/1c6be4ed0464373db7a5a1a6a780f17bc12dbcf5
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M admin/cmake/packaging/linux/LinuxDeploy.cmake
Log Message:
-----------
fix: missing library in pkg
Commit: 216860fe02c9358e021e6a54b84aa2aa0e462a99
https://github.com/ehb54/ultrascan3/commit/216860fe02c9358e021e6a54b84aa2aa0e462a99
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
fix: rcc error
Commit: be038ad56e172897c3f18b8a1319fced62a708a0
https://github.com/ehb54/ultrascan3/commit/be038ad56e172897c3f18b8a1319fced62a708a0
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M CMakeLists.txt
M admin/cmake/packaging/linux/LinuxDeploy.cmake
Log Message:
-----------
fix: update plugin directory
Commit: 87c38bbe59db529cf02b7887c7bfe57ebc8e62da
https://github.com/ehb54/ultrascan3/commit/87c38bbe59db529cf02b7887c7bfe57ebc8e62da
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-07 (Sat, 07 Mar 2026)
Changed paths:
M admin/cmake/packaging/linux/LinuxDeploy.cmake
Log Message:
-----------
add: readme
Commit: 75648618e7f79fde451a6e9f2cf9023d8ed19140
https://github.com/ehb54/ultrascan3/commit/75648618e7f79fde451a6e9f2cf9023d8ed19140
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
Log Message:
-----------
Add `load_timestate` methods to `US_ConvertScan` for handling time state from disk or database.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: fb3e874b186e61a3c3b696be002fa6134d681c4e
https://github.com/ehb54/ultrascan3/commit/fb3e874b186e61a3c3b696be002fa6134d681c4e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
Log Message:
-----------
Merge pull request #386 from ehb54/lukas/us_pseudo_absorbance_timestate
us_pseudo_absorbance: transfer timestate
Commit: f4323bc883bb8996c6e627bfb9b8295063ef176f
https://github.com/ehb54/ultrascan3/commit/f4323bc883bb8996c6e627bfb9b8295063ef176f
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/GenerateVersion.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
M programs/CMakeLists.txt
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M scripts/build.sh
Log Message:
-----------
fix: hpc build
Commit: c515903ce23bec6067e47ed10ae663518f3de230
https://github.com/ehb54/ultrascan3/commit/c515903ce23bec6067e47ed10ae663518f3de230
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
mod: use all cores with CI runners
Commit: 7a8a012754d242634bca20501e1a1c94be231d6c
https://github.com/ehb54/ultrascan3/commit/7a8a012754d242634bca20501e1a1c94be231d6c
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M CMakePresets.json
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
fix: CI runners and hpc build
Commit: 5277352caa620430b2bf8a580f9f10d43218d930
https://github.com/ehb54/ultrascan3/commit/5277352caa620430b2bf8a580f9f10d43218d930
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
fix: not all dependencies found
Commit: 60b1b16425fcda080aea3bfac20f1abad9e8bc32
https://github.com/ehb54/ultrascan3/commit/60b1b16425fcda080aea3bfac20f1abad9e8bc32
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-08 (Sun, 08 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
fix: dependenies added
Commit: 97cbb1a37275a33ef389b6fc7c2132ed4aaf52f4
https://github.com/ehb54/ultrascan3/commit/97cbb1a37275a33ef389b6fc7c2132ed4aaf52f4
Author: Saeed <samo38:github>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: large updates
Commit: 15ea3878148a0987efd94cdedb07b9e3db570cfd
https://github.com/ehb54/ultrascan3/commit/15ea3878148a0987efd94cdedb07b9e3db570cfd
Author: Saeed <samo38:github>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
finish the fit function
Commit: 1c6be507a58b5e30438f1565b772e544ee297d86
https://github.com/ehb54/ultrascan3/commit/1c6be507a58b5e30438f1565b772e544ee297d86
Author: Saeed <samo38:github>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
improve find_lambda function
Commit: 3b29d9afdd3d29c7e33af7f0b989ccf1c642bc8c
https://github.com/ehb54/ultrascan3/commit/3b29d9afdd3d29c7e33af7f0b989ccf1c642bc8c
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
A scripts/bootstrap-deps.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
fix: bootstrap deps
Commit: 4975707ad3f001539ceeea7d716043118c23d07a
https://github.com/ehb54/ultrascan3/commit/4975707ad3f001539ceeea7d716043118c23d07a
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
A buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qt5-tools/vcpkg.json
M scripts/bootstrap-deps.sh
Log Message:
-----------
fix: qt5 tools overlay
Commit: e7e0613e5d7d234f835e4e9490416e0a7f5b9803
https://github.com/ehb54/ultrascan3/commit/e7e0613e5d7d234f835e4e9490416e0a7f5b9803
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M scripts/bootstrap-deps.sh
M scripts/bootstrap-macos.sh
M scripts/build.sh
A us-build
Log Message:
-----------
add: bash wrapper
Commit: b93b52b3acb64a650854a16f3983473f49becee9
https://github.com/ehb54/ultrascan3/commit/b93b52b3acb64a650854a16f3983473f49becee9
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M scripts/build.ps1
Log Message:
-----------
mod: make profile positional for powershell
Commit: dfec7b06f5af8e9ad31d7b4c682197a103bd5fb1
https://github.com/ehb54/ultrascan3/commit/dfec7b06f5af8e9ad31d7b4c682197a103bd5fb1
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M scripts/bootstrap-windows.ps1
M scripts/build.bat
Log Message:
-----------
fix: convert -- pkg to - pkg for windows
Commit: 2f98f90faa5b640815d571359919c09034a266c1
https://github.com/ehb54/ultrascan3/commit/2f98f90faa5b640815d571359919c09034a266c1
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M scripts/bootstrap-windows.ps1
Log Message:
-----------
fix: getwin
Commit: 7249d6b2d508075f65d61b2643639c789db68d8e
https://github.com/ehb54/ultrascan3/commit/7249d6b2d508075f65d61b2643639c789db68d8e
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-09 (Mon, 09 Mar 2026)
Changed paths:
M scripts/bootstrap-windows.ps1
Log Message:
-----------
fix: add chocolatey fallback for ci
Commit: fd116b43987cda26a351438dcd70082a7c27ce17
https://github.com/ehb54/ultrascan3/commit/fd116b43987cda26a351438dcd70082a7c27ce17
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
M test/utils/test_us_time_state.cpp
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: 12ffcd24c66797e3e2d49303bce6232cc9c13d7c
https://github.com/ehb54/ultrascan3/commit/12ffcd24c66797e3e2d49303bce6232cc9c13d7c
Author: Saeed <github.com/samo38>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum: finilized the widget
Commit: 21473e24e6f59d7d4edaba9f4ea29e1174a8f579
https://github.com/ehb54/ultrascan3/commit/21473e24e6f59d7d4edaba9f4ea29e1174a8f579
Author: Saeed <github.com/samo38>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
Log Message:
-----------
reformat some lines
Commit: 55d03f81788bc585236ce0b642d89abc3293ad3a
https://github.com/ehb54/ultrascan3/commit/55d03f81788bc585236ce0b642d89abc3293ad3a
Author: Saeed <github.com/samo38>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M test/utils/test_us_crypto.cpp
M test/utils/test_us_time_state.cpp
M utils/libus_utils.pro
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_748
Commit: c3dd2ab6d66893c243fe40ba02010696a7b78d52
https://github.com/ehb54/ultrascan3/commit/c3dd2ab6d66893c243fe40ba02010696a7b78d52
Author: Saeed <github.com/samo38>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
reformat comments
Commit: 74f3ba1cd3b6646dce0b4638c98b2707dff60f2e
https://github.com/ehb54/ultrascan3/commit/74f3ba1cd3b6646dce0b4638c98b2707dff60f2e
Author: Saeed <github.com/samo38>
Date: 2026-03-10 (Tue, 10 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
us_spectrum.h: removed us_math2.h
Commit: 1dbeb030075307c5652d506be95a2186a0c22724
https://github.com/ehb54/ultrascan3/commit/1dbeb030075307c5652d506be95a2186a0c22724
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Refactor `US_Plot`: enhance double-click interactions, add zoom configuration, and improve curve/axis management with event filter.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 72c834e6d8fa6d6cd9d3b1d1eb90cc7410670c01
https://github.com/ehb54/ultrascan3/commit/72c834e6d8fa6d6cd9d3b1d1eb90cc7410670c01
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
Log Message:
-----------
Add "Click Exclusion Mode" in `US_Edit` with hover tooltips and enhanced scan selection functionality.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: ced5c0cf9086f5a21a308bcb214f061a75e89aab
https://github.com/ehb54/ultrascan3/commit/ced5c0cf9086f5a21a308bcb214f061a75e89aab
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
Add null pointer check for `plot->getZoomer()` in `US_Edit` to prevent potential crashes.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: b5607cb3d6296c0e48283cc6dd1a804c051dd8d9
https://github.com/ehb54/ultrascan3/commit/b5607cb3d6296c0e48283cc6dd1a804c051dd8d9
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
Remove redundant state machine changes in "Click Exclusion Mode" toggle of `US_Edit`.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: d548b54d3bbac75ffbf270b99643e5cf26257968
https://github.com/ehb54/ultrascan3/commit/d548b54d3bbac75ffbf270b99643e5cf26257968
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M gui/us_plot.h
Log Message:
-----------
Initialize members in `CurveDistance` struct with default values to improve stability and prevent undefined behavior.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: f3e23f8189d66b9641b37fb2c54b38119d2ef2ec
https://github.com/ehb54/ultrascan3/commit/f3e23f8189d66b9641b37fb2c54b38119d2ef2ec
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M gui/us_plot.cpp
Log Message:
-----------
Refactor `US_Plot`: add new double-click connections, refactor axis configuration, and enhance zoomer signal handling.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: d73cc2971816653d17d72f1785291c00b96b0c8b
https://github.com/ehb54/ultrascan3/commit/d73cc2971816653d17d72f1785291c00b96b0c8b
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M gui/us_plot.cpp
Log Message:
-----------
Update `US_Plot::createZoomer` to adjust `US_Zoomer` constructor arguments for axis configuration.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 45140eeddd64e45d6b5c87061f79c9aefc3ce25e
https://github.com/ehb54/ultrascan3/commit/45140eeddd64e45d6b5c87061f79c9aefc3ce25e
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M buildsys/vcpkg/overlay-ports/qt5-tools/vcpkg.json
M programs/us/revision.sh
M scripts/build.ps1
Log Message:
-----------
fix: windows CI vcpkg cache usage
Commit: 1ec6ec52d283b6c710abe095ebcad82139a64ae3
https://github.com/ehb54/ultrascan3/commit/1ec6ec52d283b6c710abe095ebcad82139a64ae3
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M CMakePresets.json
M scripts/build.sh
Log Message:
-----------
add: macos intel build
Commit: 39ad33c5c781b0f007822456803df7d591795fe7
https://github.com/ehb54/ultrascan3/commit/39ad33c5c781b0f007822456803df7d591795fe7
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M scripts/build.ps1
Log Message:
-----------
fix: vcpkg CI handling
Commit: 7fad3a4dfaa187ad4eb94554cedbe3ec6cf56773
https://github.com/ehb54/ultrascan3/commit/7fad3a4dfaa187ad4eb94554cedbe3ec6cf56773
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M programs/us_mpi_analysis/revision.sh
Log Message:
-----------
fix: change revision to git_revision to be consistent with other programs
Commit: b4417a6bfd0cfcc840668d21e88718e957734e47
https://github.com/ehb54/ultrascan3/commit/b4417a6bfd0cfcc840668d21e88718e957734e47
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M test/utils/test_us_crypto.cpp
M test/utils/test_us_time_state.cpp
M utils/libus_utils.pro
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: f0c8ede548bfb3a6f2380059dd1aacf09c6a7883
https://github.com/ehb54/ultrascan3/commit/f0c8ede548bfb3a6f2380059dd1aacf09c6a7883
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M scripts/bootstrap-macos.sh
Log Message:
-----------
fix: add missing dependencies
Commit: 09eeb4bec49931c943f732f024f1166b882c3e3a
https://github.com/ehb54/ultrascan3/commit/09eeb4bec49931c943f732f024f1166b882c3e3a
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
R README.linguist
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/libus_gui.pro
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_config/us_config.pro
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
R propignore
R proppng
R proptext
R qwtplot3d/lingua_de.ts
M test/utils/test_us_crypto.cpp
M test/utils/test_us_time_state.cpp
M utils/libus_utils.pro
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'origin/527-enhancement-sphinx-migration-2' into 527-enhancement-sphinx-migration-2
Commit: 51ba58286eaaa41af877ff9330d19560633e1c16
https://github.com/ehb54/ultrascan3/commit/51ba58286eaaa41af877ff9330d19560633e1c16
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M scripts/bootstrap-macos.sh
Log Message:
-----------
fix: add missing dependencies
Commit: 21a5f4a7ad52a67040b9426ed30a082038813498
https://github.com/ehb54/ultrascan3/commit/21a5f4a7ad52a67040b9426ed30a082038813498
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
mod: reduce linux disk space usage
Commit: 12b7e30a17e5c86f8e9d4960f7e8da86d67b3b4f
https://github.com/ehb54/ultrascan3/commit/12b7e30a17e5c86f8e9d4960f7e8da86d67b3b4f
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
mod: removed vcpkg folder creation
Commit: ece15a944fb55077213717e00f084056004367a7
https://github.com/ehb54/ultrascan3/commit/ece15a944fb55077213717e00f084056004367a7
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-11 (Wed, 11 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WinDeploy.cmake
Log Message:
-----------
mod: change qt warnings an error to force build to stop
Commit: 466789a804273570c11c7cb44bf28924caa363df
https://github.com/ehb54/ultrascan3/commit/466789a804273570c11c7cb44bf28924caa363df
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
M test/utils/test_us_time_state.cpp
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge branch 'main' into lukas/masterpassword_change
Commit: 80474c759ff865d72c8c6043ba64d38bf98e1e15
https://github.com/ehb54/ultrascan3/commit/80474c759ff865d72c8c6043ba64d38bf98e1e15
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
mod: reduce to 2 cores for ubuntu
Commit: ae52535acb54fede063aaaefd18be0c4ec92474b
https://github.com/ehb54/ultrascan3/commit/ae52535acb54fede063aaaefd18be0c4ec92474b
Author: Saeed <samo38:github>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
M test/utils/test_us_time_state.cpp
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_cfa_data.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_747
Commit: 2e81015b2e85d24c6d0619f563c9053fcb5de9e1
https://github.com/ehb54/ultrascan3/commit/2e81015b2e85d24c6d0619f563c9053fcb5de9e1
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge pull request #373 from samo38/ticket_747
Ticket 747: add US_Help to us_legacy_converter, us_query_rmsd, us_extinction, us_spectrum, us_ramp
Commit: e9f0952dea5d8bb82a866082b546997a3e457ec4
https://github.com/ehb54/ultrascan3/commit/e9f0952dea5d8bb82a866082b546997a3e457ec4
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: c4af75ba6a8e299d819034f87528f9d6997e469f
https://github.com/ehb54/ultrascan3/commit/c4af75ba6a8e299d819034f87528f9d6997e469f
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: 0f81d3f0d1fb567b1e570ed90147a17f49e57c1f
https://github.com/ehb54/ultrascan3/commit/0f81d3f0d1fb567b1e570ed90147a17f49e57c1f
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/windows/WinDeploy.cmake
R scripts/bootstrap-deps.sh
A scripts/bootstrap-linux.sh
M scripts/bootstrap-macos.sh
M scripts/build.sh
M utils/CMakeLists.txt
M vcpkg.json
Log Message:
-----------
mod: move checks to bootstrap
Commit: 4ff50388194860753c3e8bc4d697e944ce0f1641
https://github.com/ehb54/ultrascan3/commit/4ff50388194860753c3e8bc4d697e944ce0f1641
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-12 (Thu, 12 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge remote-tracking branch 'origin/527-enhancement-sphinx-migration-2' into 527-enhancement-sphinx-migration-2
Commit: 73d3d9961c360d61b70b25d54f762c7f7435325e
https://github.com/ehb54/ultrascan3/commit/73d3d9961c360d61b70b25d54f762c7f7435325e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge branch 'main' into lukas/masterpassword_change
Commit: a54f8e2bc39c26f3e2f95dae43da15eb743e4d25
https://github.com/ehb54/ultrascan3/commit/a54f8e2bc39c26f3e2f95dae43da15eb743e4d25
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge branch 'main' into lukas/us_edit_scan_exclude_click
Commit: 82349a16124679984a45c562feb3f2583dbdb531
https://github.com/ehb54/ultrascan3/commit/82349a16124679984a45c562feb3f2583dbdb531
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
mod: add platform safe check
Commit: 8fbf539a26017728861e732dc1d18eb23eb5767b
https://github.com/ehb54/ultrascan3/commit/8fbf539a26017728861e732dc1d18eb23eb5767b
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M programs/CMakeLists.txt
Log Message:
-----------
Include OpenSSL applink for MSVC on Windows
Add OpenSSL applink shim for MSVC on Windows.
Commit: 062c3d2366cc1939df31abf0a90ee9aa81093ffe
https://github.com/ehb54/ultrascan3/commit/062c3d2366cc1939df31abf0a90ee9aa81093ffe
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M utils/us_timer.h
Log Message:
-----------
Replace 'using namespace std' with std:: in us_timer.h
Prevent windows specific type definition conflicts caused by using namespace std;
Commit: d285dea10ab7bcc93c14b4f74e336121a728f25a
https://github.com/ehb54/ultrascan3/commit/d285dea10ab7bcc93c14b4f74e336121a728f25a
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M vcpkg.json
Log Message:
-----------
Update builtin-baseline version in vcpkg.json
Commit: 2528e2d95ef721c90585880700173e01e85eaa41
https://github.com/ehb54/ultrascan3/commit/2528e2d95ef721c90585880700173e01e85eaa41
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us/CMakeLists.txt
Log Message:
-----------
Enhance CMakeLists for Qt6 post-build handling
Added post-build commands for Qt6 integration in Debug and Release modes.
Commit: 52e46a6c204f209f206de1b17187485510b50872
https://github.com/ehb54/ultrascan3/commit/52e46a6c204f209f206de1b17187485510b50872
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us/CMakeLists.txt
Log Message:
-----------
Refactor post-build commands for Qt6 on Windows
Commit: 428287d058712bdf7736b86456a19b29730bec50
https://github.com/ehb54/ultrascan3/commit/428287d058712bdf7736b86456a19b29730bec50
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M utils/us_timer.h
Log Message:
-----------
Add map include to us_timer.h
Commit: b1e9456925a223045bd903ef52c4096e0e3675dc
https://github.com/ehb54/ultrascan3/commit/b1e9456925a223045bd903ef52c4096e0e3675dc
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/CMakeLists.txt
Log Message:
-----------
Add OpenSSL applink condition for MSVC on Windows
Commit: 844f0378f9d93d9976788b58bd853ff5baafd865
https://github.com/ehb54/ultrascan3/commit/844f0378f9d93d9976788b58bd853ff5baafd865
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
Log Message:
-----------
GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: ef226636cf28fac5f0b62c8cc7535c518336f7cd
https://github.com/ehb54/ultrascan3/commit/ef226636cf28fac5f0b62c8cc7535c518336f7cd
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-13 (Fri, 13 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
Log Message:
-----------
[1]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: 008ab8725529f70ff36e4845202c893ddb0e4213
https://github.com/ehb54/ultrascan3/commit/008ab8725529f70ff36e4845202c893ddb0e4213
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
Log Message:
-----------
[2]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: cee06353e7b931a3f580d1bffbeb9f2326d63532
https://github.com/ehb54/ultrascan3/commit/cee06353e7b931a3f580d1bffbeb9f2326d63532
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
Log Message:
-----------
[3]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: d9676faa3a7a6a92c56faa175bcd24c240a39b0d
https://github.com/ehb54/ultrascan3/commit/d9676faa3a7a6a92c56faa175bcd24c240a39b0d
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge pull request #389 from ehb54/lukas/qt6-msvc
CMake Qt6 windows compile MSVC
Commit: 5c16c03541cbbc99e4d1d5e6304244b7c5cd261d
https://github.com/ehb54/ultrascan3/commit/5c16c03541cbbc99e4d1d5e6304244b7c5cd261d
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into lukas/masterpassword_change
Commit: ffaae2039c0f2f0337ba9cde3e4667ade9f04c5c
https://github.com/ehb54/ultrascan3/commit/ffaae2039c0f2f0337ba9cde3e4667ade9f04c5c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into lukas/us_edit_scan_exclude_click
Commit: 5d9bc472d7f67b7cc2de87cfa943d8db9b3bc1c5
https://github.com/ehb54/ultrascan3/commit/5d9bc472d7f67b7cc2de87cfa943d8db9b3bc1c5
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
Log Message:
-----------
[4]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: f403e0ca772e609f1f064e09815e424e676e96ba
https://github.com/ehb54/ultrascan3/commit/f403e0ca772e609f1f064e09815e424e676e96ba
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
Log Message:
-----------
Fix methodChanged to suppress signal and reset checkboxes
Commit: 4c67ee8e4cb27a2a60a41177608c3cf2565db76a
https://github.com/ehb54/ultrascan3/commit/4c67ee8e4cb27a2a60a41177608c3cf2565db76a
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_plot3d.cpp
Log Message:
-----------
Remove redundant assignment to tdata
Prevent memory corruption
Commit: 6437b90d6e57f06e5aafbea01753415627877e6b
https://github.com/ehb54/ultrascan3/commit/6437b90d6e57f06e5aafbea01753415627877e6b
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
Log Message:
-----------
Update condition for vbar20 comparison
Commit: 4c73a0c1ae974bfad85180a15588c4203f772bae
https://github.com/ehb54/ultrascan3/commit/4c73a0c1ae974bfad85180a15588c4203f772bae
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
Log Message:
-----------
Fix typo in comment and streamline methodChanged
Commit: 24cd6bc5d78c14e84c05915d5b043c7628d0c084
https://github.com/ehb54/ultrascan3/commit/24cd6bc5d78c14e84c05915d5b043c7628d0c084
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_plot3d.cpp
Log Message:
-----------
Merge pull request #391 from ehb54/lukas/us_mwl_spectra_3dplot_reversey
Remove redundant assignment to tdata
Commit: cd22d118497ba373e73cde824f09464646c78f6e
https://github.com/ehb54/ultrascan3/commit/cd22d118497ba373e73cde824f09464646c78f6e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_plot3d.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_analyte_protein_vbar_no_sequence
Commit: a92e13702d0a02ed4fddd7be57df0c9ec134c449
https://github.com/ehb54/ultrascan3/commit/a92e13702d0a02ed4fddd7be57df0c9ec134c449
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
Log Message:
-----------
Merge pull request #392 from ehb54/lukas/us_analyte_protein_vbar_no_sequence
Update condition for vbar20 comparison
Commit: 648e2c616df93b8cb3f16672c3315e44e99a1cdd
https://github.com/ehb54/ultrascan3/commit/648e2c616df93b8cb3f16672c3315e44e99a1cdd
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_ddist_combine_all_checkbox
Commit: 524fb756825b453194c34611c2ce7624e62f7f53
https://github.com/ehb54/ultrascan3/commit/524fb756825b453194c34611c2ce7624e62f7f53
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_edit_scan_exclude_click
Commit: 45a5699260fb89e53971aee6bbf0b5f13d1b40fa
https://github.com/ehb54/ultrascan3/commit/45a5699260fb89e53971aee6bbf0b5f13d1b40fa
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
Log Message:
-----------
Merge branch 'main' into lukas/masterpassword_change
Commit: 8a2d982f8e8906a85bfe363487622d59a1ff361e
https://github.com/ehb54/ultrascan3/commit/8a2d982f8e8906a85bfe363487622d59a1ff361e
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: 6d361b64fc8f314fe8399f028d2c79ef9d0e417b
https://github.com/ehb54/ultrascan3/commit/6d361b64fc8f314fe8399f028d2c79ef9d0e417b
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M scripts/build.sh
Log Message:
-----------
mod: clean after build set
Commit: 5b81b9c41fc973670663047afba591d6edaa898c
https://github.com/ehb54/ultrascan3/commit/5b81b9c41fc973670663047afba591d6edaa898c
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WinDeploy.cmake
Log Message:
-----------
fix: packaging
Commit: 10e620037c83dddc66d518ab28e33eb36c3e3c17
https://github.com/ehb54/ultrascan3/commit/10e620037c83dddc66d518ab28e33eb36c3e3c17
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-14 (Sat, 14 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: 07c6d8042bd25e59ca20ca5bd16ed3b6ff8b321c
https://github.com/ehb54/ultrascan3/commit/07c6d8042bd25e59ca20ca5bd16ed3b6ff8b321c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Merge pull request #385 from ehb54/lukas/masterpassword_change
Refactor password re-encryption logic
Commit: ed3ecfca235f46d9da27159afb01288bbcb42cd4
https://github.com/ehb54/ultrascan3/commit/ed3ecfca235f46d9da27159afb01288bbcb42cd4
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_ddist_combine_all_checkbox
Commit: 3e5bea2d6f8973b1443f2db3438bbbcfe128378f
https://github.com/ehb54/ultrascan3/commit/3e5bea2d6f8973b1443f2db3438bbbcfe128378f
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_edit_scan_exclude_click
Commit: 3afad49842a3c53daabf741428b683cb8e86837c
https://github.com/ehb54/ultrascan3/commit/3afad49842a3c53daabf741428b683cb8e86837c
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: afdf12344c5555d4130fa310bf352f2c27bbdadc
https://github.com/ehb54/ultrascan3/commit/afdf12344c5555d4130fa310bf352f2c27bbdadc
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
A buildsys/vcpkg/overlay-ports/qttools.disable/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools.disable/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools.disable/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools.disable/windeployqt.debug.bat
R buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
R buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
R buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
R buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
Log Message:
-----------
test remove qttools overlay
Commit: 691c2112f822e5f82f6f153dbb8d568663367a2c
https://github.com/ehb54/ultrascan3/commit/691c2112f822e5f82f6f153dbb8d568663367a2c
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-15 (Sun, 15 Mar 2026)
Changed paths:
M programs/us_config/us_admin.cpp
Log Message:
-----------
Merge remote-tracking branch 'origin/527-enhancement-sphinx-migration-2' into 527-enhancement-sphinx-migration-2
Commit: 447c06a32ef5ade7850e1391500673c408a9c5e4
https://github.com/ehb54/ultrascan3/commit/447c06a32ef5ade7850e1391500673c408a9c5e4
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Refactor `US_Zoomer` and `US_DoubleClickEventFilter`: enhance zoom base initialization, update rubber band/tracker pen settings, and improve double-click handling for axes and curves.
Commit: a73d1f0d1b712c4345cbd63219466ef87ccabfdb
https://github.com/ehb54/ultrascan3/commit/a73d1f0d1b712c4345cbd63219466ef87ccabfdb
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M programs/us_reporter_gmp/us_reporter_gmp.cpp
Log Message:
-----------
[5]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: 28dafe4f6fe91d2a19d25a13dca2a9700c8524c1
https://github.com/ehb54/ultrascan3/commit/28dafe4f6fe91d2a19d25a13dca2a9700c8524c1
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
Log Message:
-----------
[6]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...
Commit: 88e5262aa244a552236f70eb1b00274e245d2f90
https://github.com/ehb54/ultrascan3/commit/88e5262aa244a552236f70eb1b00274e245d2f90
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M programs/us_reporter_gmp/us_reporter_gmp.cpp
Log Message:
-----------
[6a]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...ush
Commit: 5e19ef3b84e9f0542544c16ad99f1909133b6197
https://github.com/ehb54/ultrascan3/commit/5e19ef3b84e9f0542544c16ad99f1909133b6197
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M programs/us_reporter_gmp/us_reporter_gmp.cpp
Log Message:
-----------
[6b]GMP: Report -- test inclusion of the replica groups consisting of 1 channel only into Report...ush
Commit: cfd2bf22ab1f023d0f1bf0c3677f13218d99b4e3
https://github.com/ehb54/ultrascan3/commit/cfd2bf22ab1f023d0f1bf0c3677f13218d99b4e3
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_plot3d.cpp
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_config/us_admin.cpp
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
Merge pull request #393 from ehb54/main
Merge main into alexey-dev-issue785
Commit: 5304d85db5ed89082fe2cf86d0fd9f3f3fbd65c3
https://github.com/ehb54/ultrascan3/commit/5304d85db5ed89082fe2cf86d0fd9f3f3fbd65c3
Author: Saeed <github.com/samo38>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M gui/us_analyte_gui.cpp
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M gui/us_plot3d.cpp
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us_config/us_admin.cpp
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_ramp_gui.h
M utils/us_timer.h
M vcpkg.json
Log Message:
-----------
merge upstream/main , resolved conflicts
Commit: 5fbfc3b610b9edaa535c2cdde484daba5a1f6d23
https://github.com/ehb54/ultrascan3/commit/5fbfc3b610b9edaa535c2cdde484daba5a1f6d23
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WinDeploy.cmake
A buildsys/vcpkg/overlay-ports/qt5-tools/fix-pkgconfig-qt5uiplugin-not-found.patch
A buildsys/vcpkg/overlay-ports/qt5-tools/fix-spawnvp-argv.patch
A buildsys/vcpkg/overlay-ports/qt5-tools/libclang.patch
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
M buildsys/vcpkg/overlay-ports/qt5-tools/vcpkg.json
M scripts/bootstrap-windows.ps1
M scripts/build.ps1
Log Message:
-----------
fix: restore patch for qt5-tools
Commit: ee9314b8a10555d579148933ce5fb59dc77f25a5
https://github.com/ehb54/ultrascan3/commit/ee9314b8a10555d579148933ce5fb59dc77f25a5
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M admin/cmake/packaging/windows/WinDeploy.cmake
M scripts/bootstrap-windows.ps1
Log Message:
-----------
fix: nasm check and add supporting dlls to installation
Commit: f9860bd8d1ac6f5c5c4a4b0dd90e3cb7f09bd131
https://github.com/ehb54/ultrascan3/commit/f9860bd8d1ac6f5c5c4a4b0dd90e3cb7f09bd131
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-16 (Mon, 16 Mar 2026)
Changed paths:
M scripts/build.ps1
M vcpkg.json
Log Message:
-----------
mod: check path length is too long on qt 5
Commit: 4365eb02a1c29a38a42fe848da39deab69e67715
https://github.com/ehb54/ultrascan3/commit/4365eb02a1c29a38a42fe848da39deab69e67715
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
R buildsys/vcpkg/overlay-ports/qttools.disable/devendor-litehtml.patch
R buildsys/vcpkg/overlay-ports/qttools.disable/portfile.cmake
R buildsys/vcpkg/overlay-ports/qttools.disable/vcpkg.json
R buildsys/vcpkg/overlay-ports/qttools.disable/windeployqt.debug.bat
Log Message:
-----------
del: remove unused overlay
Commit: c9f9553d1be9cca2abdbef64d64daa2688c9b977
https://github.com/ehb54/ultrascan3/commit/c9f9553d1be9cca2abdbef64d64daa2688c9b977
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
Log Message:
-----------
Merge pull request #390 from ehb54/lukas/us_ddist_combine_all_checkbox
Change behavior of all button in combine discrete distributions
Commit: 50ee53da3e470361bd6a9fa94454856cc21660a1
https://github.com/ehb54/ultrascan3/commit/50ee53da3e470361bd6a9fa94454856cc21660a1
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_ddist_combine/us_ddist_combine.cpp
Log Message:
-----------
Merge branch 'main' into lukas/us_edit_scan_exclude_click
Commit: c6c251770d12273ef8519ef12212ecaf90df9c8a
https://github.com/ehb54/ultrascan3/commit/c6c251770d12273ef8519ef12212ecaf90df9c8a
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
Log Message:
-----------
Merge pull request #388 from ehb54/lukas/us_edit_scan_exclude_click
Refactor US_Plot interactions and enhance US_Edit functionality
Commit: efe1a2ba8b277a19ae50d1262c14239f9f9dac81
https://github.com/ehb54/ultrascan3/commit/efe1a2ba8b277a19ae50d1262c14239f9f9dac81
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M scripts/bootstrap-linux.sh
Log Message:
-----------
add: missing linux packages libsm-dev libice-dev
Commit: 84f1faaa0819a233d3023bd3ae0d75d2ccaf6430
https://github.com/ehb54/ultrascan3/commit/84f1faaa0819a233d3023bd3ae0d75d2ccaf6430
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
Log Message:
-----------
add: port overlay for linux arm fix
Commit: aae4ac3a14f0a1c0ce391cedb1844ac845045869
https://github.com/ehb54/ultrascan3/commit/aae4ac3a14f0a1c0ce391cedb1844ac845045869
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M utils/us_crypto.cpp
Log Message:
-----------
Change encryption finalization to decryption
Commit: 9454cb777d85cb65835ea5eb51fc05bc18d58e78
https://github.com/ehb54/ultrascan3/commit/9454cb777d85cb65835ea5eb51fc05bc18d58e78
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
Log Message:
-----------
Implement EncryptDecryptTest for US_Crypto
Add unit test for encryption and decryption consistency
Commit: 2c028de85502d48e60a380c61b93dc7a7e2f7727
https://github.com/ehb54/ultrascan3/commit/2c028de85502d48e60a380c61b93dc7a7e2f7727
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
Log Message:
-----------
Add unit test for encryption with different passwords
Commit: ac1ca1f8183d056ed7e98541ac5ac52d725b33f8
https://github.com/ehb54/ultrascan3/commit/ac1ca1f8183d056ed7e98541ac5ac52d725b33f8
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
Log Message:
-----------
GMP-ABDE: Ranges & Upload check for ext. profiles -- while situations when extinction profiles for one or more analytes do not cover all wvls in Ranges are caught, the message is misleading and does not provide a hint for inability to proceed; capture exact message at the stage of living 7. Ranges panel & pass to Upload tab before enabling run submission...
Commit: 8ba4b05b7f14586d7e527145ba6c464fd3dc3e4d
https://github.com/ehb54/ultrascan3/commit/8ba4b05b7f14586d7e527145ba6c464fd3dc3e4d
Author: Saeed <github.com/samo38>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
add wavelength limit picker, add checkbox for db loadings
Commit: efd337809634d3a364046f3a040862ce1b2a81f4
https://github.com/ehb54/ultrascan3/commit/efd337809634d3a364046f3a040862ce1b2a81f4
Author: Saeed <github.com/samo38>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_748
Commit: b94ce34c55dd06ddc8ccfbb1239c262fe1c9cd52
https://github.com/ehb54/ultrascan3/commit/b94ce34c55dd06ddc8ccfbb1239c262fe1c9cd52
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
Log Message:
-----------
Merge pull request #395 from ehb54/lukas/us_crypto_decrypt_fix
Change encryption finalization to decryption
Commit: d6c8bb86eb4e77d526599971c15a35328a4927d8
https://github.com/ehb54/ultrascan3/commit/d6c8bb86eb4e77d526599971c15a35328a4927d8
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue791
Commit: e163509a00c5876ac83d78f14c8a969dae251b75
https://github.com/ehb54/ultrascan3/commit/e163509a00c5876ac83d78f14c8a969dae251b75
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue785
Commit: 501adedca88f7d331c3a70d62c04cc4992f86979
https://github.com/ehb54/ultrascan3/commit/501adedca88f7d331c3a70d62c04cc4992f86979
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
M programs/us/CMakeLists.txt
M scripts/build.sh
Log Message:
-----------
add: overlay port for qttools
Commit: e1e93704ad79bf8d43c6c4eba74a4c90b1dc1fdf
https://github.com/ehb54/ultrascan3/commit/e1e93704ad79bf8d43c6c4eba74a4c90b1dc1fdf
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: ce7a1d14ace3b2d645b17aeab7be4f3fb881ff7b
https://github.com/ehb54/ultrascan3/commit/ce7a1d14ace3b2d645b17aeab7be4f3fb881ff7b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
Log Message:
-----------
Merge pull request #394 from ehb54/alexey-dev-issue785
Alexey dev issue785: Show sigle-channel-replica group info in the Average over Replicas Section of the Report
Commit: e6579802fd032cde1c91863e8af0b2885d936062
https://github.com/ehb54/ultrascan3/commit/e6579802fd032cde1c91863e8af0b2885d936062
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-17 (Tue, 17 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue791
Commit: d0eb3d3a8f27a33f4dc6b857f1a2ddcb6c52af5d
https://github.com/ehb54/ultrascan3/commit/d0eb3d3a8f27a33f4dc6b857f1a2ddcb6c52af5d
Author: Saeed <github.com/samo38>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_748
Commit: 563c55a8a0ccb209a43dc363ec87842b0f4d6489
https://github.com/ehb54/ultrascan3/commit/563c55a8a0ccb209a43dc363ec87842b0f4d6489
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge pull request #387 from samo38/ticket_748
Ticket 748: Enhance Spectrum Decomposition GUI and functionality
Commit: 3fef021d4fad55bc1bb07521af0bff3e7ac12095
https://github.com/ehb54/ultrascan3/commit/3fef021d4fad55bc1bb07521af0bff3e7ac12095
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue791
Commit: cb192562f44149651f3157090d395a05f79da39e
https://github.com/ehb54/ultrascan3/commit/cb192562f44149651f3157090d395a05f79da39e
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
Log Message:
-----------
Merge pull request #396 from ehb54/alexey-dev-issue791
GMP-ABDE: Ranges & Upload check for ext. profiles -- while situations…
Commit: b1fbfbcbd47cd296b70ccd6ac9178c4efd6b4a4e
https://github.com/ehb54/ultrascan3/commit/b1fbfbcbd47cd296b70ccd6ac9178c4efd6b4a4e
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
GMP-dataDisk -- enable centerpiece selection in Cells if dataDisk...
Commit: a3b6b6a58f4f1d94a9268cc04a014d3ce1a1471e
https://github.com/ehb54/ultrascan3/commit/a3b6b6a58f4f1d94a9268cc04a014d3ce1a1471e
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
[1]GMP-dataDisk -- enable centerpiece selection in Cells if dataDisk...
Commit: 992f15191ea67cf8c4dc85736429ab5939967d2f
https://github.com/ehb54/ultrascan3/commit/992f15191ea67cf8c4dc85736429ab5939967d2f
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
[2]GMP-dataDisk -- enable centerpiece selection in Cells if dataDisk...
Commit: 50c4d0f4452a8f5f8052b4e63ae06abb11f8fe89
https://github.com/ehb54/ultrascan3/commit/50c4d0f4452a8f5f8052b4e63ae06abb11f8fe89
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-18 (Wed, 18 Mar 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
[3]GMP-dataDisk -- enable centerpiece selection in Cells if dataDisk...
Commit: 81695e7ad3f97f7cd46fe42d8148a8911fc3fc43
https://github.com/ehb54/ultrascan3/commit/81695e7ad3f97f7cd46fe42d8148a8911fc3fc43
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
Log Message:
-----------
Merge branch 'main' into 527-enhancement-sphinx-migration-2
Commit: bed8960f5d491db022be512a82491fc248abcbf9
https://github.com/ehb54/ultrascan3/commit/bed8960f5d491db022be512a82491fc248abcbf9
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M CMakeLists.txt
M doc/manual/CMakeLists.txt
M doc/manual/README.md
M doc/manual/source/conf.py
M programs/us/CMakeLists.txt
Log Message:
-----------
mod: PR comments addressed
Commit: 5205cb5542bd366b63909189ac9691c6473fc071
https://github.com/ehb54/ultrascan3/commit/5205cb5542bd366b63909189ac9691c6473fc071
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
M test/utils/test_us_crypto.cpp
M utils/us_crypto.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
Log Message:
-----------
Merge remote-tracking branch 'origin/527-enhancement-sphinx-migration-2' into 527-enhancement-sphinx-migration-2
Commit: 76e772666ba74f76a6d525444b9c0cd8f9d01e76
https://github.com/ehb54/ultrascan3/commit/76e772666ba74f76a6d525444b9c0cd8f9d01e76
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M CMakeLists.txt
M doc/manual/CMakeLists.txt
Log Message:
-----------
fix: skip subdirectory doc/manual if hpc or documentation off
Commit: abe431ae514b67270d74e84b599ef069673c1164
https://github.com/ehb54/ultrascan3/commit/abe431ae514b67270d74e84b599ef069673c1164
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
Log Message:
-----------
GMP-ABDE -- 4. EDIT points addressed for ticket #792...
Commit: b1c5c0de414d093440081fca1a975a4e1118a9d1
https://github.com/ehb54/ultrascan3/commit/b1c5c0de414d093440081fca1a975a4e1118a9d1
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[1]GMP-ABDE -- 4. EDIT points addressed for ticket #792...
Commit: c53782335d3f1e5fc4fc2ea6f97ee3d64c79389b
https://github.com/ehb54/ultrascan3/commit/c53782335d3f1e5fc4fc2ea6f97ee3d64c79389b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[2]GMP-ABDE -- 4. EDIT points addressed for ticket #792...
Commit: 672254d0e59b1e555aa0aa2506e7871bb188c5d4
https://github.com/ehb54/ultrascan3/commit/672254d0e59b1e555aa0aa2506e7871bb188c5d4
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-19 (Thu, 19 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
[3]GMP-ABDE -- 4. EDIT points addressed for ticket #792...
Commit: 05b438d52cffda88429e278cae66fead57b193ec
https://github.com/ehb54/ultrascan3/commit/05b438d52cffda88429e278cae66fead57b193ec
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M CMakePresets.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
R doc/manual/source/conf.py-orig.081225
M gui/CMakeLists.txt
M programs/us_helpdaemon/us_helpdaemon.cpp
Log Message:
-----------
fix: Reformat CMakePresets.json to multi-line style; add US3_NO_DB=ON to all HPC
presets; fix GLU elseif(UNIX) branch; drop dead Windows assistant path check.
Commit: 21882cd1fd05a489de72b721e1e4bebaa8fb9ac5
https://github.com/ehb54/ultrascan3/commit/21882cd1fd05a489de72b721e1e4bebaa8fb9ac5
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M CMakeLists.txt
M doc/manual/CMakeLists.txt
M programs/us/CMakeLists.txt
Log Message:
-----------
fix: pr comments
Commit: 39a94736afc6e6b1450549833138c494fc1ff36b
https://github.com/ehb54/ultrascan3/commit/39a94736afc6e6b1450549833138c494fc1ff36b
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M doc/manual/Makefile
Log Message:
-----------
fix: make all moved to top
Commit: 5470c9ac380ea0b9e9e522bcb85e831bf0e466fd
https://github.com/ehb54/ultrascan3/commit/5470c9ac380ea0b9e9e522bcb85e831bf0e466fd
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
Enforce analyte for solution in us_solution_gui
Commit: cb5e49b544fddf3329fd8662619f4a524628a69e
https://github.com/ehb54/ultrascan3/commit/cb5e49b544fddf3329fd8662619f4a524628a69e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
Update comments, fix function signature
Commit: 01301f4fb775a852d7048cf88a308ff8dd796f5a
https://github.com/ehb54/ultrascan3/commit/01301f4fb775a852d7048cf88a308ff8dd796f5a
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M programs/us_abde/us_norm_profile.cpp
Log Message:
-----------
GMP-ABDE -- 5. Analysis addressed for ticket #792...
Commit: 3ba588420b506827b73516e8dfa8cd4ae9b2ff28
https://github.com/ehb54/ultrascan3/commit/3ba588420b506827b73516e8dfa8cd4ae9b2ff28
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M programs/us_abde/us_norm_profile.cpp
Log Message:
-----------
[2]GMP-ABDE -- 5. Analysis addressed for ticket #792...
Commit: 55ad77b5ea4726efff74c2e3da2b763af7b12070
https://github.com/ehb54/ultrascan3/commit/55ad77b5ea4726efff74c2e3da2b763af7b12070
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-20 (Fri, 20 Mar 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M doc/manual/CMakeLists.txt
Log Message:
-----------
fix: presets
Commit: ad1ceab5b0c51349e506ad4feebf2d0e9442b18f
https://github.com/ehb54/ultrascan3/commit/ad1ceab5b0c51349e506ad4feebf2d0e9442b18f
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-21 (Sat, 21 Mar 2026)
Changed paths:
M gui/us_solution_gui.cpp
Log Message:
-----------
Show warning before accepting a solution without analyte or common vbar
Commit: 7bfe32ca6b7830a5b30fc3e995feb35daccc7460
https://github.com/ehb54/ultrascan3/commit/7bfe32ca6b7830a5b30fc3e995feb35daccc7460
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-21 (Sat, 21 Mar 2026)
Changed paths:
M utils/us_astfem_rsa.cpp
Log Message:
-----------
Add band_forming check for low concentration flag
Commit: fb3b2bbbe972a00864dd68b72b5da64234516056
https://github.com/ehb54/ultrascan3/commit/fb3b2bbbe972a00864dd68b72b5da64234516056
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-21 (Sat, 21 Mar 2026)
Changed paths:
M programs/us_astfem_sim/us_astfem_sim.cpp
Log Message:
-----------
Fix y-axis scale for band-forming plots
Commit: 8aeda75b69a9c2d9df2af035ea7265bb93bdacef
https://github.com/ehb54/ultrascan3/commit/8aeda75b69a9c2d9df2af035ea7265bb93bdacef
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-21 (Sat, 21 Mar 2026)
Changed paths:
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A pkg/macos/README.md
Log Message:
-----------
mod: readmes
Commit: 81c3a3a5d2a743645b19098027b58ecdc429d634
https://github.com/ehb54/ultrascan3/commit/81c3a3a5d2a743645b19098027b58ecdc429d634
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-03-22 (Sun, 22 Mar 2026)
Changed paths:
R doc/manual/source/2dsa/2dsa_adv.rst
R doc/manual/source/2dsa/2dsa_analys.rst
R doc/manual/source/2dsa/2dsa_main.rst
R doc/manual/source/2dsa/index.rst
R doc/manual/source/3d_plot.rst
R doc/manual/source/analyte/analyte_edit.rst
R doc/manual/source/analyte/analyte_new.rst
R doc/manual/source/analyte/analyte_select.rst
R doc/manual/source/analyte/analyte_settings.rst
R doc/manual/source/analyte/index.rst
R doc/manual/source/associations.rst
R doc/manual/source/astfem_sim.rst
R doc/manual/source/beckman_openauc.rst
R doc/manual/source/buffer/buffer_edit.rst
R doc/manual/source/buffer/buffer_new.rst
R doc/manual/source/buffer/buffer_select.rst
R doc/manual/source/buffer/buffer_settings.rst
R doc/manual/source/buffer/index.rst
R doc/manual/source/buoyancy_editor.rst
R doc/manual/source/colorgradient.rst
R doc/manual/source/combine_models.rst
R doc/manual/source/common_dialogs.rst
R doc/manual/source/components.rst
R doc/manual/source/config.rst
R doc/manual/source/convert.rst
R doc/manual/source/ddist_combine.rst
R doc/manual/source/dens_match.rst
R doc/manual/source/dmga_init.rst
R doc/manual/source/dmga_init_constr.rst
R doc/manual/source/experiment/cells.rst
R doc/manual/source/experiment/general.rst
R doc/manual/source/experiment/import.rst
R doc/manual/source/experiment/index.rst
R doc/manual/source/experiment/liveupdate.rst
R doc/manual/source/experiment/optics.rst
R doc/manual/source/experiment/range.rst
R doc/manual/source/experiment/rotor.rst
R doc/manual/source/experiment/solutions.rst
R doc/manual/source/experiment/speeds.rst
R doc/manual/source/experiment/submit.rst
R doc/manual/source/export_legacy.rst
R doc/manual/source/fe_match/fe_match_adv.rst
R doc/manual/source/fe_match/fe_match_main.rst
R doc/manual/source/fe_match/fe_match_simulate.rst
R doc/manual/source/fe_match/index.rst
R doc/manual/source/fit_meniscus.rst
R doc/manual/source/ga_initialize.rst
R doc/manual/source/gmp/gmp.rst
R doc/manual/source/gmp/gmp_audit_trail.rst
R doc/manual/source/gmp/gmp_automation.rst
R doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
R doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
R doc/manual/source/gmp/gmp_data_acquisition/index.rst
R doc/manual/source/gmp/gmp_protocol_development.rst
R doc/manual/source/gmp/gmp_report_generator.rst
R doc/manual/source/gmp/gmp_signature.rst
R doc/manual/source/gmp/index.rst
R doc/manual/source/grid_editor.rst
R doc/manual/source/idist_combine.rst
R doc/manual/source/images/2dsa_3dplot.png
R doc/manual/source/images/2dsa_advan.png
R doc/manual/source/images/2dsa_analvv.png
R doc/manual/source/images/2dsa_analys.png
R doc/manual/source/images/2dsa_main-c.png
R doc/manual/source/images/2dsa_main-o.png
R doc/manual/source/images/2dsa_resplot.png
R doc/manual/source/images/D20W_bar.png
R doc/manual/source/images/MW-bar.png
R doc/manual/source/images/RINplot.png
R doc/manual/source/images/TINplot.png
R doc/manual/source/images/UltraScan-logo.png
R doc/manual/source/images/add_RIN-TIN.png
R doc/manual/source/images/add_RIN.png
R doc/manual/source/images/add_TIN.png
R doc/manual/source/images/advanced_config.png
R doc/manual/source/images/analyte_details.png
R doc/manual/source/images/analyte_edit.png
R doc/manual/source/images/analyte_edit_spec.png
R doc/manual/source/images/analyte_new_sequence.png
R doc/manual/source/images/analyte_newc.png
R doc/manual/source/images/analyte_newd.png
R doc/manual/source/images/analyte_newp.png
R doc/manual/source/images/analyte_selectc.png
R doc/manual/source/images/analyte_selectd.png
R doc/manual/source/images/analyte_selectp.png
R doc/manual/source/images/analyte_sequence.png
R doc/manual/source/images/analyte_settings.png
R doc/manual/source/images/analyte_spec-gui.png
R doc/manual/source/images/analyte_specmenu.png
R doc/manual/source/images/analyte_spectrum.png
R doc/manual/source/images/analytes.png
R doc/manual/source/images/associations.png
R doc/manual/source/images/astfem_sim.png
R doc/manual/source/images/bad_grid.png
R doc/manual/source/images/beck_convert-2.png
R doc/manual/source/images/beck_converter.png
R doc/manual/source/images/bitmap.png
R doc/manual/source/images/buffer_edit.png
R doc/manual/source/images/buffer_edit_setting.png
R doc/manual/source/images/buffer_edit_spectrum.png
R doc/manual/source/images/buffer_info.png
R doc/manual/source/images/buffer_manage_spectrum.png
R doc/manual/source/images/buffer_new.png
R doc/manual/source/images/buffer_new_spectrum.png
R doc/manual/source/images/buffer_select.png
R doc/manual/source/images/buffer_settings.png
R doc/manual/source/images/buffer_spectrum.png
R doc/manual/source/images/cfa_view-loadauc.png
R doc/manual/source/images/cfa_view-loadraw.png
R doc/manual/source/images/cfa_view-main.png
R doc/manual/source/images/cfa_view-statsauc.png
R doc/manual/source/images/cfa_view-statsraw.png
R doc/manual/source/images/color-1.png
R doc/manual/source/images/color-2.png
R doc/manual/source/images/color-a.png
R doc/manual/source/images/color-b.png
R doc/manual/source/images/colorgrad1.png
R doc/manual/source/images/colorgradient/col1_colgen.png
R doc/manual/source/images/colorgradient/col1_colgen_Fe_match.png
R doc/manual/source/images/colorgradient/col1_colgen_GA.png
R doc/manual/source/images/colorgradient/col2_colgen.png
R doc/manual/source/images/colorgradient/colorgrad.png
R doc/manual/source/images/colorgradient/colorgradient_main.png
R doc/manual/source/images/colorgradient/components.png
R doc/manual/source/images/colorgradient/model_editor.png
R doc/manual/source/images/combine_models-idedit.png
R doc/manual/source/images/combine_models-save.png
R doc/manual/source/images/combine_models.png
R doc/manual/source/images/components.png
R doc/manual/source/images/config.png
R doc/manual/source/images/config1.png
R doc/manual/source/images/config2.png
R doc/manual/source/images/config_plot.png
R doc/manual/source/images/convert-RIdata.png
R doc/manual/source/images/convert-exclude.png
R doc/manual/source/images/convert-experiment.png
R doc/manual/source/images/convert-mwl.png
R doc/manual/source/images/convert-seltrip.png
R doc/manual/source/images/convert-subset.png
R doc/manual/source/images/convert-tolerance.png
R doc/manual/source/images/convert.png
R doc/manual/source/images/custom_grid-1.png
R doc/manual/source/images/custom_grid.png
R doc/manual/source/images/data_converter.png
R doc/manual/source/images/data_loader-edits.png
R doc/manual/source/images/data_loader-trips.png
R doc/manual/source/images/data_loader.png
R doc/manual/source/images/database.png
R doc/manual/source/images/ddist_combine-selrun.png
R doc/manual/source/images/ddist_combine.png
R doc/manual/source/images/densmatch_main.png
R doc/manual/source/images/densmatch_mpars_completed.png
R doc/manual/source/images/densmatch_mpars_empty.png
R doc/manual/source/images/densmatch_rmvmodels.png
R doc/manual/source/images/edit_buffer_spec_menu.png
R doc/manual/source/images/eq1-mean.png
R doc/manual/source/images/eq2-skew.png
R doc/manual/source/images/eq3-kurtosis.png
R doc/manual/source/images/eq4-moments.png
R doc/manual/source/images/eq5-variance.png
R doc/manual/source/images/eq6-stddev.png
R doc/manual/source/images/eq7-probsigma.png
R doc/manual/source/images/eq8-confidence.png
R doc/manual/source/images/experiment_cells.png
R doc/manual/source/images/experiment_general.png
R doc/manual/source/images/experiment_optics.png
R doc/manual/source/images/experiment_overview.png
R doc/manual/source/images/experiment_photomult.png
R doc/manual/source/images/experiment_range.png
R doc/manual/source/images/experiment_range_details.png
R doc/manual/source/images/experiment_range_selector.png
R doc/manual/source/images/experiment_range_selmanual.png
R doc/manual/source/images/experiment_rotor.png
R doc/manual/source/images/experiment_solutions.png
R doc/manual/source/images/experiment_solutions_comments.png
R doc/manual/source/images/experiment_speeds.png
R doc/manual/source/images/experiment_submit.png
R doc/manual/source/images/experiment_submit_details.png
R doc/manual/source/images/experiment_upload.png
R doc/manual/source/images/export_leg_1.png
R doc/manual/source/images/export_leg_RA.png
R doc/manual/source/images/export_leg_RI.png
R doc/manual/source/images/export_leg_auc.png
R doc/manual/source/images/export_leg_beck.png
R doc/manual/source/images/export_legacy.png
R doc/manual/source/images/fe_load_data.png
R doc/manual/source/images/fe_load_model_distrib.png
R doc/manual/source/images/fe_match.png
R doc/manual/source/images/fe_match_3dplot.png
R doc/manual/source/images/fe_match_adv.png
R doc/manual/source/images/fe_match_all.png
R doc/manual/source/images/fe_match_allct.png
R doc/manual/source/images/fe_match_lddat1.png
R doc/manual/source/images/fe_match_lddat2.png
R doc/manual/source/images/fe_match_lddat3.png
R doc/manual/source/images/fe_match_lddat4.png
R doc/manual/source/images/fe_match_ra.png
R doc/manual/source/images/fe_match_resplot.png
R doc/manual/source/images/fe_match_sim1.png
R doc/manual/source/images/fe_match_sim2.png
R doc/manual/source/images/fe_match_sim3_1b.png
R doc/manual/source/images/fe_match_sim3_1p.png
R doc/manual/source/images/fe_match_sim3_2b.png
R doc/manual/source/images/fe_match_sim3_2p.png
R doc/manual/source/images/fe_match_sim3_3b.png
R doc/manual/source/images/fe_match_sim3_4b.png
R doc/manual/source/images/fe_match_sim3_5b.png
R doc/manual/source/images/fe_match_sim3_5p.png
R doc/manual/source/images/fe_match_sim3_6b.png
R doc/manual/source/images/fe_match_sim3_7b.png
R doc/manual/source/images/fe_match_sim3_8b.png
R doc/manual/source/images/fe_match_sim4.png
R doc/manual/source/images/fe_match_sim5.png
R doc/manual/source/images/fe_match_sim6.png
R doc/manual/source/images/fe_match_sim7.png
R doc/manual/source/images/fe_match_simulated.png
R doc/manual/source/images/fe_match_viewer.png
R doc/manual/source/images/fe_sim-1.png
R doc/manual/source/images/fe_sim-2.png
R doc/manual/source/images/fit_men-editupd.png
R doc/manual/source/images/fit_men-load.png
R doc/manual/source/images/fit_men_bot.png
R doc/manual/source/images/fit_meniscus.png
R doc/manual/source/images/ga_initialize-o.png
R doc/manual/source/images/ga_initialize-p.png
R doc/manual/source/images/ga_initialize.png
R doc/manual/source/images/ga_report-1.png
R doc/manual/source/images/ga_report-2.png
R doc/manual/source/images/ga_report-3.png
R doc/manual/source/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/source/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/source/images/gmp/automation/2dsa.png
R doc/manual/source/images/gmp/automation/2dsa_it.png
R doc/manual/source/images/gmp/automation/2dsa_mc.png
R doc/manual/source/images/gmp/automation/Aprofile.png
R doc/manual/source/images/gmp/automation/analysis.png
R doc/manual/source/images/gmp/automation/auto_edit.png
R doc/manual/source/images/gmp/automation/bitmap.png
R doc/manual/source/images/gmp/automation/cells.png
R doc/manual/source/images/gmp/automation/data_viewer_rando.png
R doc/manual/source/images/gmp/automation/data_viewer_rin.png
R doc/manual/source/images/gmp/automation/data_viewer_tin.png
R doc/manual/source/images/gmp/automation/lims.png
R doc/manual/source/images/gmp/automation/main_window.png
R doc/manual/source/images/gmp/automation/man_edit.png
R doc/manual/source/images/gmp/automation/optics.png
R doc/manual/source/images/gmp/automation/pcsa.png
R doc/manual/source/images/gmp/automation/pcsa_report.png
R doc/manual/source/images/gmp/automation/plot.png
R doc/manual/source/images/gmp/automation/ranges.png
R doc/manual/source/images/gmp/automation/report_editor.png
R doc/manual/source/images/gmp/automation/rotor.png
R doc/manual/source/images/gmp/automation/solutions.png
R doc/manual/source/images/gmp/automation/speed.png
R doc/manual/source/images/gmp/automation/submit.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/source/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/source/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/source/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/source/images/gmp/gmp.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/source/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/source/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/source/images/gmp/signature/gmp_signature_01.png
R doc/manual/source/images/gmp/signature/gmp_signature_02.png
R doc/manual/source/images/gmp/signature/gmp_signature_03.png
R doc/manual/source/images/gmp/signature/gmp_signature_04.png
R doc/manual/source/images/gmp/signature/gmp_signature_05.png
R doc/manual/source/images/gmp/signature/gmp_signature_06.png
R doc/manual/source/images/gmp/signature/gmp_signature_07.png
R doc/manual/source/images/gmp/signature/gmp_signature_08.png
R doc/manual/source/images/gmp/vhw_distribution.png
R doc/manual/source/images/good_grid.png
R doc/manual/source/images/grid-setup.png
R doc/manual/source/images/grid_editor.png
R doc/manual/source/images/grid_editor_multi_grids.png
R doc/manual/source/images/grid_editor_multi_grids_sed.png
R doc/manual/source/images/grid_editor_mw_view.png
R doc/manual/source/images/grid_editor_subgrid1-bad.png
R doc/manual/source/images/grid_editor_subgrid1-good.png
R doc/manual/source/images/grid_editor_subgrid2-bad.png
R doc/manual/source/images/grid_editor_subgrid2-good.png
R doc/manual/source/images/grid_editor_subgrid3-bad.png
R doc/manual/source/images/grid_editor_subgrid3-good.png
R doc/manual/source/images/hori_cs.png
R doc/manual/source/images/idist_comb_selPre.png
R doc/manual/source/images/idist_comb_seldis.png
R doc/manual/source/images/idist_combine.png
R doc/manual/source/images/incr_sigmoid.png
R doc/manual/source/images/load_auc-search.png
R doc/manual/source/images/load_auc-trips.png
R doc/manual/source/images/load_auc.png
R doc/manual/source/images/load_colormap.png
R doc/manual/source/images/load_model_dis-MID.png
R doc/manual/source/images/load_model_distrib.png
R doc/manual/source/images/load_noise.png
R doc/manual/source/images/load_noise_details.png
R doc/manual/source/images/manage_data.png
R doc/manual/source/images/manage_data_bhide.png
R doc/manual/source/images/manage_data_bshow.png
R doc/manual/source/images/manage_data_cmenu-1.png
R doc/manual/source/images/manage_data_cmenu-2.png
R doc/manual/source/images/manage_data_conf.png
R doc/manual/source/images/manage_data_exp.png
R doc/manual/source/images/manage_data_pasw.png
R doc/manual/source/images/manage_data_sync.png
R doc/manual/source/images/manage_data_thelp-1.png
R doc/manual/source/images/manage_data_thelp-2.png
R doc/manual/source/images/master-pw.png
R doc/manual/source/images/model_editor.png
R doc/manual/source/images/mwlr_spectra_3d.png
R doc/manual/source/images/mwlr_spectra_cont.png
R doc/manual/source/images/mwlr_spectra_f.png
R doc/manual/source/images/mwlr_spectra_o.png
R doc/manual/source/images/mwlr_spectra_save.png
R doc/manual/source/images/mwlr_view_3dplot.png
R doc/manual/source/images/mwlr_view_load.png
R doc/manual/source/images/mwlr_view_pltctrl.png
R doc/manual/source/images/mwlr_viewer.png
R doc/manual/source/images/mwlr_viewer_3d.png
R doc/manual/source/images/mwlr_viewer_ctl.png
R doc/manual/source/images/mwlr_viewer_wvl.png
R doc/manual/source/images/mwlr_viewer_xwavl.png
R doc/manual/source/images/noise_prompt.png
R doc/manual/source/images/noise_vec_db.png
R doc/manual/source/images/norm_gridplot.png
R doc/manual/source/images/optima_config_edit.png
R doc/manual/source/images/optima_config_new.png
R doc/manual/source/images/optima_host_config.png
R doc/manual/source/images/pcsa.png
R doc/manual/source/images/pcsa_3dplot.png
R doc/manual/source/images/pcsa_adv_control.png
R doc/manual/source/images/pcsa_all.png
R doc/manual/source/images/pcsa_analys-line.png
R doc/manual/source/images/pcsa_analys-sigm.png
R doc/manual/source/images/pcsa_bitmap.png
R doc/manual/source/images/pcsa_controls_simulated.png
R doc/manual/source/images/pcsa_main-c.png
R doc/manual/source/images/pcsa_mline_sigm.png
R doc/manual/source/images/pcsa_mline_str.png
R doc/manual/source/images/pcsa_mline_unsim.png
R doc/manual/source/images/pcsa_mlines-line1.png
R doc/manual/source/images/pcsa_mlines-line2.png
R doc/manual/source/images/pcsa_mlines-sigm1.png
R doc/manual/source/images/pcsa_mlines-sigm2.png
R doc/manual/source/images/pcsa_regul.png
R doc/manual/source/images/pcsa_regul_sim.png
R doc/manual/source/images/pcsa_report.png
R doc/manual/source/images/pcsa_res_viewer.png
R doc/manual/source/images/pcsa_resplot.png
R doc/manual/source/images/pcsa_rpscan-auto.png
R doc/manual/source/images/pcsa_rpscan-select.png
R doc/manual/source/images/pcsa_rpscan.png
R doc/manual/source/images/pcsa_rpscan_sim.png
R doc/manual/source/images/pcsa_sigmoid_eq.png
R doc/manual/source/images/pcsa_simulated.png
R doc/manual/source/images/pline_dsig.png
R doc/manual/source/images/pline_power.png
R doc/manual/source/images/pline_stline.png
R doc/manual/source/images/plot_controls.png
R doc/manual/source/images/predict1.png
R doc/manual/source/images/predict2-1.png
R doc/manual/source/images/predict2.png
R doc/manual/source/images/print.png
R doc/manual/source/images/process_crash.png
R doc/manual/source/images/process_crash2.png
R doc/manual/source/images/pseudo3d_comb_rmv.png
R doc/manual/source/images/pseudo3d_combine.png
R doc/manual/source/images/register.png
R doc/manual/source/images/report.png
R doc/manual/source/images/reporter-cmenu.png
R doc/manual/source/images/reporter-details.png
R doc/manual/source/images/reporter-loadprof.png
R doc/manual/source/images/reporter-save.png
R doc/manual/source/images/reporter-saveprof.png
R doc/manual/source/images/reporter-view.png
R doc/manual/source/images/reporter-viewitem.png
R doc/manual/source/images/reporter.png
R doc/manual/source/images/residualplot.png
R doc/manual/source/images/residuals.png
R doc/manual/source/images/rmsd_query-c.png
R doc/manual/source/images/rmsd_query-o.png
R doc/manual/source/images/rotor-add.png
R doc/manual/source/images/rotor-save-calibration.png
R doc/manual/source/images/rotor.png
R doc/manual/source/images/rotorstretch-0.png
R doc/manual/source/images/rotorstretch-1.png
R doc/manual/source/images/rotorstretch-2.png
R doc/manual/source/images/rotorstretch-3.png
R doc/manual/source/images/rotorstretch-4.png
R doc/manual/source/images/rotorstretch-5.png
R doc/manual/source/images/rotorstretch-6.png
R doc/manual/source/images/rotorstretch-7.png
R doc/manual/source/images/rotorstretch_report.png
R doc/manual/source/images/run_details.png
R doc/manual/source/images/s20W_bar.png
R doc/manual/source/images/sassoc.png
R doc/manual/source/images/save_colormap.png
R doc/manual/source/images/second_moment.png
R doc/manual/source/images/select_edits.png
R doc/manual/source/images/select_runs.png
R doc/manual/source/images/sequence.png
R doc/manual/source/images/set-zvalue.png
R doc/manual/source/images/simparams.png
R doc/manual/source/images/simulatedReport.png
R doc/manual/source/images/solution_edit.png
R doc/manual/source/images/solution_new.png
R doc/manual/source/images/solution_select.png
R doc/manual/source/images/solution_settings.png
R doc/manual/source/images/somo/somo_icon.png
R doc/manual/source/images/spectrum_extinction.png
R doc/manual/source/images/sw_spectrum.png
R doc/manual/source/images/time_derivative.png
R doc/manual/source/images/timestate-0.png
R doc/manual/source/images/timestate-1.png
R doc/manual/source/images/timestate-2.png
R doc/manual/source/images/timestate-3.png
R doc/manual/source/images/timestate-4.png
R doc/manual/source/images/ultra.xpm
R doc/manual/source/images/ultrascan3.png
R doc/manual/source/images/upload_fit_spectrum.png
R doc/manual/source/images/us_buffer.png
R doc/manual/source/images/us_buffer_spect.png
R doc/manual/source/images/us_conv-RA.png
R doc/manual/source/images/us_convert/us_convert_01.png
R doc/manual/source/images/us_convert/us_convert_02.png
R doc/manual/source/images/us_convert/us_convert_03.png
R doc/manual/source/images/us_convert/us_convert_04.png
R doc/manual/source/images/us_convert/us_convert_05.png
R doc/manual/source/images/us_convert/us_convert_06.png
R doc/manual/source/images/us_convert/us_convert_07.png
R doc/manual/source/images/us_convert/us_convert_08.png
R doc/manual/source/images/us_convert/us_convert_09.png
R doc/manual/source/images/us_convert/us_convert_10.png
R doc/manual/source/images/us_convert/us_convert_11.png
R doc/manual/source/images/us_convert/us_convert_12.png
R doc/manual/source/images/us_convert/us_convert_13.png
R doc/manual/source/images/us_convert/us_convert_14.png
R doc/manual/source/images/us_convert_01.png
R doc/manual/source/images/us_convert_02.png
R doc/manual/source/images/us_convert_03.png
R doc/manual/source/images/us_convert_04.png
R doc/manual/source/images/us_convert_05.png
R doc/manual/source/images/us_convert_06.png
R doc/manual/source/images/us_convert_07.png
R doc/manual/source/images/us_convert_08.png
R doc/manual/source/images/us_convert_09.png
R doc/manual/source/images/us_convert_10.png
R doc/manual/source/images/us_convert_11.png
R doc/manual/source/images/us_convert_12.png
R doc/manual/source/images/us_convert_13.png
R doc/manual/source/images/us_convert_14.png
R doc/manual/source/images/us_convert_definedscans.png
R doc/manual/source/images/us_convert_definesubset.png
R doc/manual/source/images/us_edit.png
R doc/manual/source/images/us_edit_mwl.png
R doc/manual/source/images/us_equiltime.png
R doc/manual/source/images/us_extinction-0.png
R doc/manual/source/images/us_extinction-00.png
R doc/manual/source/images/us_extinction-000.png
R doc/manual/source/images/us_extinction-1.png
R doc/manual/source/images/us_extinction-2.png
R doc/manual/source/images/us_extinction-3.png
R doc/manual/source/images/us_fds_filemanager-0.png
R doc/manual/source/images/us_fds_filemanager-1.png
R doc/manual/source/images/us_fds_filemanager-2.png
R doc/manual/source/images/us_fds_filemanager-3.png
R doc/manual/source/images/us_fds_filemanager-4.png
R doc/manual/source/images/us_investigator-2.png
R doc/manual/source/images/us_investigator.png
R doc/manual/source/images/us_modelmetrics-0.png
R doc/manual/source/images/us_modmet_report.png
R doc/manual/source/images/us_project.png
R doc/manual/source/images/us_project1.png
R doc/manual/source/images/us_project2.png
R doc/manual/source/images/us_project3.png
R doc/manual/source/images/us_project_add-supdata.png
R doc/manual/source/images/us_project_edit-supdata.png
R doc/manual/source/images/us_project_web.png
R doc/manual/source/images/us_project_webed.png
R doc/manual/source/images/us_solution1.png
R doc/manual/source/images/us_solution2.png
R doc/manual/source/images/us_solution3.png
R doc/manual/source/images/us_spectrum-0.png
R doc/manual/source/images/us_spectrum-1.png
R doc/manual/source/images/us_spectrum-load.png
R doc/manual/source/images/usfont-1.png
R doc/manual/source/images/usfont-2.png
R doc/manual/source/images/vhw_combine-combo.png
R doc/manual/source/images/vhw_combine-envel.png
R doc/manual/source/images/vhw_combine-selrun.png
R doc/manual/source/images/vhw_combine.png
R doc/manual/source/images/vhw_distribution.png
R doc/manual/source/images/vhw_enh_groups.png
R doc/manual/source/images/vhw_enh_groups.png6-33-11.png
R doc/manual/source/images/vhw_enh_groups_res.png
R doc/manual/source/images/vhw_enhanced.png
R doc/manual/source/images/vhw_histogram.png
R doc/manual/source/images/xpn_viewer-loaded.png
R doc/manual/source/images/xpn_viewer-saved.png
R doc/manual/source/images/xpn_viewer.png
R doc/manual/source/images/zvalue_eq.png
M doc/manual/source/index.rst
R doc/manual/source/manage_data.rst
R doc/manual/source/model_editor.rst
R doc/manual/source/mwl_species_fit.rst
R doc/manual/source/mwl_species_sim.rst
R doc/manual/source/mwl_spectra.rst
R doc/manual/source/mwlr_viewer.rst
R doc/manual/source/pcsa/index.rst
R doc/manual/source/pcsa/pcsa.rst
R doc/manual/source/pcsa/pcsa_adv.rst
R doc/manual/source/pcsa/pcsa_analys.rst
R doc/manual/source/pcsa/pcsa_mlines.rst
R doc/manual/source/pcsa/pcsa_results.rst
R doc/manual/source/pcsa/pcsa_rpscan.rst
R doc/manual/source/predict1.rst
R doc/manual/source/predict2.rst
R doc/manual/source/pseudo3d.rst
R doc/manual/source/ramp_data.rst
R doc/manual/source/register.rst
R doc/manual/source/reporter.rst
R doc/manual/source/rmsd_query.rst
R doc/manual/source/rotor.rst
R doc/manual/source/rotor_calibration.rst
R doc/manual/source/run_details.rst
R doc/manual/source/sassoc.rst
R doc/manual/source/second_moment.rst
R doc/manual/source/simparams.rst
R doc/manual/source/solutions/index.rst
R doc/manual/source/solutions/solution_edit.rst
R doc/manual/source/solutions/solution_new.rst
R doc/manual/source/solutions/solution_select.rst
R doc/manual/source/solutions/solution_settings.rst
R doc/manual/source/start_page.rst
R doc/manual/source/temp.txt
R doc/manual/source/time_derivative.rst
R doc/manual/source/tmp.rst
R doc/manual/source/tmst_viewer.rst
R doc/manual/source/us_buoyancy.rst
R doc/manual/source/us_edit.rst
R doc/manual/source/us_equiltime.rst
R doc/manual/source/us_extinction.rst
R doc/manual/source/us_fds_filemanager.rst
R doc/manual/source/us_investigator.rst
R doc/manual/source/us_modelmetrics.rst
R doc/manual/source/us_project.rst
R doc/manual/source/us_spectrum.rst
R doc/manual/source/vhw_combine.rst
R doc/manual/source/vhw_distrib_plot.rst
R doc/manual/source/vhw_enhanced.rst
R doc/manual/source/xpn_viewer.rst
Log Message:
-----------
mod: removed documentation.
Commit: f448548065ff12b1c240270de9d4827cf5f51a79
https://github.com/ehb54/ultrascan3/commit/f448548065ff12b1c240270de9d4827cf5f51a79
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-24 (Tue, 24 Mar 2026)
Changed paths:
M .github/workflows/bump-version.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/conf.py
A doc/manual/source/index.rst
A doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/CMakeLists.txt
M gui/us_help.cpp
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M qwtplot3d/CMakeLists.txt
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
A us-build
M utils/CMakeLists.txt
M utils/us_memory.cpp
M vcpkg.json
Log Message:
-----------
Merge pull request #374 from ehb54/527-enhancement-sphinx-migration-2
Integrate Sphinx Document Generation
Commit: 0a9196aea05b0dc1c6f984302c09ffefa32db302
https://github.com/ehb54/ultrascan3/commit/0a9196aea05b0dc1c6f984302c09ffefa32db302
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-03-24 (Tue, 24 Mar 2026)
Changed paths:
M .github/workflows/bump-version.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/conf.py
A doc/manual/source/index.rst
A doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/CMakeLists.txt
M gui/us_help.cpp
M gui/us_plot.cpp
M gui/us_plot.h
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_config/us_admin.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
M qwtplot3d/CMakeLists.txt
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
M test/utils/test_us_crypto.cpp
A us-build
M utils/CMakeLists.txt
M utils/us_crypto.cpp
M utils/us_memory.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into ehb54-issue-670
Commit: a3d889c69f7012ff5840a86814780d3490d5ea2a
https://github.com/ehb54/ultrascan3/commit/a3d889c69f7012ff5840a86814780d3490d5ea2a
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-03-24 (Tue, 24 Mar 2026)
Changed paths:
M programs/us/revision.sh
Log Message:
-----------
Merge pull request #377 from ehb54/ehb54-issue-670
fix revision.sh checks osx/linux compat.
Commit: aba103e8cab9d71929941aa888ae3aae0872e049
https://github.com/ehb54/ultrascan3/commit/aba103e8cab9d71929941aa888ae3aae0872e049
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-24 (Tue, 24 Mar 2026)
Changed paths:
M .github/workflows/bump-version.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/conf.py
A doc/manual/source/index.rst
A doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/CMakeLists.txt
M gui/us_help.cpp
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M qwtplot3d/CMakeLists.txt
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
A us-build
M utils/CMakeLists.txt
M utils/us_memory.cpp
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into lukas/us_solution_analyte
Commit: aece3e3e7171e4b42fde89c87820aa518fb4315c
https://github.com/ehb54/ultrascan3/commit/aece3e3e7171e4b42fde89c87820aa518fb4315c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-24 (Tue, 24 Mar 2026)
Changed paths:
M .github/workflows/bump-version.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/conf.py
A doc/manual/source/index.rst
A doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/CMakeLists.txt
M gui/us_help.cpp
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M qwtplot3d/CMakeLists.txt
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
A us-build
M utils/CMakeLists.txt
M utils/us_memory.cpp
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into lukas/us_astfem_sim_bfe_fix
Commit: e219670a84259a14eabcbd6567f410caa19460e4
https://github.com/ehb54/ultrascan3/commit/e219670a84259a14eabcbd6567f410caa19460e4
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-26 (Thu, 26 Mar 2026)
Changed paths:
M makeall.sh
Log Message:
-----------
Fix makeall.sh permissions
Commit: ffbfc46c1f6425db8f285c8ebfe83093848eb1b6
https://github.com/ehb54/ultrascan3/commit/ffbfc46c1f6425db8f285c8ebfe83093848eb1b6
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-26 (Thu, 26 Mar 2026)
Changed paths:
M qmakeall.sh
Log Message:
-----------
Fix qmakeall.sh permissions
Commit: ce69cccd373c62d3682696c7c1e3afbec47ca21c
https://github.com/ehb54/ultrascan3/commit/ce69cccd373c62d3682696c7c1e3afbec47ca21c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-27 (Fri, 27 Mar 2026)
Changed paths:
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
Merge pull request #397 from ehb54/lukas/us_solution_analyte
Enforce analyte for solution in us_solution_gui
Commit: cdf7099448e0de34a4e877280839f6acfacf5596
https://github.com/ehb54/ultrascan3/commit/cdf7099448e0de34a4e877280839f6acfacf5596
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-27 (Fri, 27 Mar 2026)
Changed paths:
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
Merge branch 'main' into lukas/us_astfem_sim_bfe_fix
Commit: b543a92af379330a545e7dcc63e12daaf3d45239
https://github.com/ehb54/ultrascan3/commit/b543a92af379330a545e7dcc63e12daaf3d45239
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-27 (Fri, 27 Mar 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
Log Message:
-----------
GMP-ABDE -- 4. EDIT typo fixed...
Commit: abf971e0666fcec75923b6219b9033864ede6e45
https://github.com/ehb54/ultrascan3/commit/abf971e0666fcec75923b6219b9033864ede6e45
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-03-27 (Fri, 27 Mar 2026)
Changed paths:
M makeall.sh
M programs/us_astfem_sim/us_astfem_sim.cpp
M qmakeall.sh
M utils/us_astfem_rsa.cpp
Log Message:
-----------
Merge pull request #399 from ehb54/lukas/us_astfem_sim_bfe_fix
Add band-forming check and fix y-axis scale for plots
Commit: 407aa2fbe647825650959edafde01a47e49ac0a4
https://github.com/ehb54/ultrascan3/commit/407aa2fbe647825650959edafde01a47e49ac0a4
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-03-27 (Fri, 27 Mar 2026)
Changed paths:
M .github/workflows/bump-version.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/conf.py
A doc/manual/source/index.rst
A doc/manual/source/requirements.txt
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M gui/CMakeLists.txt
M gui/us_help.cpp
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M qmakeall.sh
M qwtplot3d/CMakeLists.txt
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
A us-build
M utils/CMakeLists.txt
M utils/us_astfem_rsa.cpp
M utils/us_memory.cpp
M vcpkg.json
Log Message:
-----------
Merge pull request #401 from ehb54/main
pull main into alexey-dev-issue792
Commit: 82d4d191eb9afe4cf103b3792c6730f51eb8bafa
https://github.com/ehb54/ultrascan3/commit/82d4d191eb9afe4cf103b3792c6730f51eb8bafa
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-04-02 (Thu, 02 Apr 2026)
Changed paths:
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
Log Message:
-----------
GMP-ABDE -- 4. EDIT: ask user if only last scan was selected for each channel before accepting new edit parameters...
Commit: e58b784f94dc22571d37ac77acdc90c148ee0004
https://github.com/ehb54/ultrascan3/commit/e58b784f94dc22571d37ac77acdc90c148ee0004
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-04-02 (Thu, 02 Apr 2026)
Changed paths:
M programs/us_abde/us_norm_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge pull request #398 from ehb54/alexey-dev-issue792
Alexey dev issue792: GMP-ABDE & dataDisk changes
Commit: 94b9a553e412fb675ba67eea2c9f665b6207233d
https://github.com/ehb54/ultrascan3/commit/94b9a553e412fb675ba67eea2c9f665b6207233d
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/CMakeLists.txt
Log Message:
-----------
Update CMakeLists to use `${SPHINX_PROJECT}` variables for Qt help file generation paths (`.qhp` and `.qhcp`).
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: e2d7da6bbf9fcc62e4bfa452f5ec19623488611e
https://github.com/ehb54/ultrascan3/commit/e2d7da6bbf9fcc62e4bfa452f5ec19623488611e
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/requirements.txt
Log Message:
-----------
Add `sphinxcontrib-qthelp` and `myst-parser` to documentation requirements for Qt help and Markdown support.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 1e69c5071f55b5bc4963bc33c54c1f5978d9a86f
https://github.com/ehb54/ultrascan3/commit/1e69c5071f55b5bc4963bc33c54c1f5978d9a86f
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Enhance Sphinx configuration: add version metadata generation from Git, update QtHelp/HTML output, and refine documentation structure.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 64293373d85c1dd99096806b49351207ccc8fcbd
https://github.com/ehb54/ultrascan3/commit/64293373d85c1dd99096806b49351207ccc8fcbd
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/index.rst
Log Message:
-----------
Expand UltraScan-III documentation: add comprehensive structure, improve navigation with toctree captions, and include download link for PDF manual.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 4996aa594c1ed86a6a18b51f4a2e7f2f312ba230
https://github.com/ehb54/ultrascan3/commit/4996aa594c1ed86a6a18b51f4a2e7f2f312ba230
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
A doc/manual/source/2dsa/2dsa_adv.rst
A doc/manual/source/2dsa/2dsa_analys.rst
A doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/2dsa/index.rst
A doc/manual/source/3000_rpm.rst
A doc/manual/source/3d_plot.rst
A doc/manual/source/_static/custom.css
A doc/manual/source/_static/images/2dsa_3dplot.png
A doc/manual/source/_static/images/2dsa_advan.png
A doc/manual/source/_static/images/2dsa_analvv.png
A doc/manual/source/_static/images/2dsa_analys.png
A doc/manual/source/_static/images/2dsa_main-c.png
A doc/manual/source/_static/images/2dsa_main-o.png
A doc/manual/source/_static/images/2dsa_resplot.png
A doc/manual/source/_static/images/D20W_bar.png
A doc/manual/source/_static/images/MW-bar.png
A doc/manual/source/_static/images/RINplot.png
A doc/manual/source/_static/images/TINplot.png
A doc/manual/source/_static/images/UltraScan-logo.png
A doc/manual/source/_static/images/abde-1.png
A doc/manual/source/_static/images/add_RIN-TIN.png
A doc/manual/source/_static/images/add_RIN.png
A doc/manual/source/_static/images/add_TIN.png
A doc/manual/source/_static/images/advanced_config.png
A doc/manual/source/_static/images/analyte_details.png
A doc/manual/source/_static/images/analyte_edit.png
A doc/manual/source/_static/images/analyte_edit_spec.png
A doc/manual/source/_static/images/analyte_new_sequence.png
A doc/manual/source/_static/images/analyte_newc.png
A doc/manual/source/_static/images/analyte_newd.png
A doc/manual/source/_static/images/analyte_newp.png
A doc/manual/source/_static/images/analyte_selectc.png
A doc/manual/source/_static/images/analyte_selectd.png
A doc/manual/source/_static/images/analyte_selectp.png
A doc/manual/source/_static/images/analyte_sequence.png
A doc/manual/source/_static/images/analyte_settings.png
A doc/manual/source/_static/images/analyte_spec-gui.png
A doc/manual/source/_static/images/analyte_specmenu.png
A doc/manual/source/_static/images/analyte_spectrum.png
A doc/manual/source/_static/images/analytes.png
A doc/manual/source/_static/images/associations.png
A doc/manual/source/_static/images/astfem_sim.png
A doc/manual/source/_static/images/bad_grid.png
A doc/manual/source/_static/images/beck_convert-2.png
A doc/manual/source/_static/images/beck_converter.png
A doc/manual/source/_static/images/bitmap.png
A doc/manual/source/_static/images/buffer_edit.png
A doc/manual/source/_static/images/buffer_edit_setting.png
A doc/manual/source/_static/images/buffer_edit_spectrum.png
A doc/manual/source/_static/images/buffer_info.png
A doc/manual/source/_static/images/buffer_manage_spectrum.png
A doc/manual/source/_static/images/buffer_new.png
A doc/manual/source/_static/images/buffer_new_spectrum.png
A doc/manual/source/_static/images/buffer_select.png
A doc/manual/source/_static/images/buffer_settings.png
A doc/manual/source/_static/images/buffer_spectrum.png
A doc/manual/source/_static/images/cfa_view-loadauc.png
A doc/manual/source/_static/images/cfa_view-loadraw.png
A doc/manual/source/_static/images/cfa_view-main.png
A doc/manual/source/_static/images/cfa_view-statsauc.png
A doc/manual/source/_static/images/cfa_view-statsraw.png
A doc/manual/source/_static/images/color-1.png
A doc/manual/source/_static/images/color-2.png
A doc/manual/source/_static/images/color-a.png
A doc/manual/source/_static/images/color-b.png
A doc/manual/source/_static/images/colorgrad1.png
A doc/manual/source/_static/images/colorgradient/col1_colgen.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/_static/images/colorgradient/col2_colgen.png
A doc/manual/source/_static/images/colorgradient/colorgrad.png
A doc/manual/source/_static/images/colorgradient/colorgradient_main.png
A doc/manual/source/_static/images/colorgradient/components.png
A doc/manual/source/_static/images/colorgradient/model_editor.png
A doc/manual/source/_static/images/combine_models-idedit.png
A doc/manual/source/_static/images/combine_models-save.png
A doc/manual/source/_static/images/combine_models.png
A doc/manual/source/_static/images/components.png
A doc/manual/source/_static/images/config.png
A doc/manual/source/_static/images/config1.png
A doc/manual/source/_static/images/config2.png
A doc/manual/source/_static/images/config_plot.png
A doc/manual/source/_static/images/convert-RIdata.png
A doc/manual/source/_static/images/convert-exclude.png
A doc/manual/source/_static/images/convert-experiment.png
A doc/manual/source/_static/images/convert-mwl.png
A doc/manual/source/_static/images/convert-seltrip.png
A doc/manual/source/_static/images/convert-subset.png
A doc/manual/source/_static/images/convert-tolerance.png
A doc/manual/source/_static/images/convert.png
A doc/manual/source/_static/images/custom_grid-1.png
A doc/manual/source/_static/images/custom_grid.png
A doc/manual/source/_static/images/data_converter.png
A doc/manual/source/_static/images/data_loader-edits.png
A doc/manual/source/_static/images/data_loader-trips.png
A doc/manual/source/_static/images/data_loader.png
A doc/manual/source/_static/images/database.png
A doc/manual/source/_static/images/ddist_combine-selrun.png
A doc/manual/source/_static/images/ddist_combine.png
A doc/manual/source/_static/images/densmatch_main.png
A doc/manual/source/_static/images/densmatch_mpars_completed.png
A doc/manual/source/_static/images/densmatch_mpars_empty.png
A doc/manual/source/_static/images/densmatch_rmvmodels.png
A doc/manual/source/_static/images/edit_buffer_spec_menu.png
A doc/manual/source/_static/images/eq1-mean.png
A doc/manual/source/_static/images/eq2-skew.png
A doc/manual/source/_static/images/eq3-kurtosis.png
A doc/manual/source/_static/images/eq4-moments.png
A doc/manual/source/_static/images/eq5-variance.png
A doc/manual/source/_static/images/eq6-stddev.png
A doc/manual/source/_static/images/eq7-probsigma.png
A doc/manual/source/_static/images/eq8-confidence.png
A doc/manual/source/_static/images/experiment_cells.png
A doc/manual/source/_static/images/experiment_edit.png
A doc/manual/source/_static/images/experiment_general.png
A doc/manual/source/_static/images/experiment_import.png
A doc/manual/source/_static/images/experiment_liveupdate.png
A doc/manual/source/_static/images/experiment_liveupdate_run.png
A doc/manual/source/_static/images/experiment_optics.png
A doc/manual/source/_static/images/experiment_overview.png
A doc/manual/source/_static/images/experiment_photomult.png
A doc/manual/source/_static/images/experiment_range.png
A doc/manual/source/_static/images/experiment_range_details.png
A doc/manual/source/_static/images/experiment_range_selector.png
A doc/manual/source/_static/images/experiment_range_selmanual.png
A doc/manual/source/_static/images/experiment_rotor.png
A doc/manual/source/_static/images/experiment_solutions.png
A doc/manual/source/_static/images/experiment_solutions_comments.png
A doc/manual/source/_static/images/experiment_speeds.png
A doc/manual/source/_static/images/experiment_submit.png
A doc/manual/source/_static/images/experiment_submit_details.png
A doc/manual/source/_static/images/experiment_upload.png
A doc/manual/source/_static/images/export_leg_1.png
A doc/manual/source/_static/images/export_leg_RA.png
A doc/manual/source/_static/images/export_leg_RI.png
A doc/manual/source/_static/images/export_leg_auc.png
A doc/manual/source/_static/images/export_leg_beck.png
A doc/manual/source/_static/images/export_legacy.png
A doc/manual/source/_static/images/fe_load_data.png
A doc/manual/source/_static/images/fe_load_model_distrib.png
A doc/manual/source/_static/images/fe_match.png
A doc/manual/source/_static/images/fe_match_3dplot.png
A doc/manual/source/_static/images/fe_match_adv.png
A doc/manual/source/_static/images/fe_match_all.png
A doc/manual/source/_static/images/fe_match_allct.png
A doc/manual/source/_static/images/fe_match_lddat1.png
A doc/manual/source/_static/images/fe_match_lddat2.png
A doc/manual/source/_static/images/fe_match_lddat3.png
A doc/manual/source/_static/images/fe_match_lddat4.png
A doc/manual/source/_static/images/fe_match_ra.png
A doc/manual/source/_static/images/fe_match_resplot.png
A doc/manual/source/_static/images/fe_match_sim1.png
A doc/manual/source/_static/images/fe_match_sim2.png
A doc/manual/source/_static/images/fe_match_sim3_1b.png
A doc/manual/source/_static/images/fe_match_sim3_1p.png
A doc/manual/source/_static/images/fe_match_sim3_2b.png
A doc/manual/source/_static/images/fe_match_sim3_2p.png
A doc/manual/source/_static/images/fe_match_sim3_3b.png
A doc/manual/source/_static/images/fe_match_sim3_4b.png
A doc/manual/source/_static/images/fe_match_sim3_5b.png
A doc/manual/source/_static/images/fe_match_sim3_5p.png
A doc/manual/source/_static/images/fe_match_sim3_6b.png
A doc/manual/source/_static/images/fe_match_sim3_7b.png
A doc/manual/source/_static/images/fe_match_sim3_8b.png
A doc/manual/source/_static/images/fe_match_sim4.png
A doc/manual/source/_static/images/fe_match_sim5.png
A doc/manual/source/_static/images/fe_match_sim6.png
A doc/manual/source/_static/images/fe_match_sim7.png
A doc/manual/source/_static/images/fe_match_simulated.png
A doc/manual/source/_static/images/fe_match_viewer.png
A doc/manual/source/_static/images/fe_sim-1.png
A doc/manual/source/_static/images/fe_sim-2.png
A doc/manual/source/_static/images/fit_men-editupd.png
A doc/manual/source/_static/images/fit_men-load.png
A doc/manual/source/_static/images/fit_men_bot.png
A doc/manual/source/_static/images/fit_meniscus.png
A doc/manual/source/_static/images/ga_initialize-o.png
A doc/manual/source/_static/images/ga_initialize-p.png
A doc/manual/source/_static/images/ga_initialize.png
A doc/manual/source/_static/images/ga_report-1.png
A doc/manual/source/_static/images/ga_report-2.png
A doc/manual/source/_static/images/ga_report-3.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/_static/images/gmp/automation/2dsa.png
A doc/manual/source/_static/images/gmp/automation/2dsa_it.png
A doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
A doc/manual/source/_static/images/gmp/automation/Aprofile.png
A doc/manual/source/_static/images/gmp/automation/analysis.png
A doc/manual/source/_static/images/gmp/automation/auto_edit.png
A doc/manual/source/_static/images/gmp/automation/bitmap.png
A doc/manual/source/_static/images/gmp/automation/cells.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/_static/images/gmp/automation/lims.png
A doc/manual/source/_static/images/gmp/automation/main_window.png
A doc/manual/source/_static/images/gmp/automation/man_edit.png
A doc/manual/source/_static/images/gmp/automation/optics.png
A doc/manual/source/_static/images/gmp/automation/pcsa.png
A doc/manual/source/_static/images/gmp/automation/pcsa_report.png
A doc/manual/source/_static/images/gmp/automation/plot.png
A doc/manual/source/_static/images/gmp/automation/ranges.png
A doc/manual/source/_static/images/gmp/automation/report_editor.png
A doc/manual/source/_static/images/gmp/automation/rotor.png
A doc/manual/source/_static/images/gmp/automation/solutions.png
A doc/manual/source/_static/images/gmp/automation/speed.png
A doc/manual/source/_static/images/gmp/automation/submit.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/_static/images/gmp/gmp.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/_static/images/gmp/vhw_distribution.png
A doc/manual/source/_static/images/good_grid.png
A doc/manual/source/_static/images/grid-setup.png
A doc/manual/source/_static/images/grid_editor.png
A doc/manual/source/_static/images/grid_editor_multi_grids.png
A doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
A doc/manual/source/_static/images/grid_editor_mw_view.png
A doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid1-good.png
A doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid2-good.png
A doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid3-good.png
A doc/manual/source/_static/images/hori_cs.png
A doc/manual/source/_static/images/idist_comb_selPre.png
A doc/manual/source/_static/images/idist_comb_seldis.png
A doc/manual/source/_static/images/idist_combine.png
A doc/manual/source/_static/images/import_drop-triple.png
A doc/manual/source/_static/images/incr_sigmoid.png
A doc/manual/source/_static/images/load_auc-search.png
A doc/manual/source/_static/images/load_auc-trips.png
A doc/manual/source/_static/images/load_auc.png
A doc/manual/source/_static/images/load_colormap.png
A doc/manual/source/_static/images/load_model_dis-MID.png
A doc/manual/source/_static/images/load_model_distrib.png
A doc/manual/source/_static/images/load_noise.png
A doc/manual/source/_static/images/load_noise_details.png
A doc/manual/source/_static/images/loaded_mwl-specfit.png
A doc/manual/source/_static/images/manage_data.png
A doc/manual/source/_static/images/manage_data_bhide.png
A doc/manual/source/_static/images/manage_data_bshow.png
A doc/manual/source/_static/images/manage_data_cmenu-1.png
A doc/manual/source/_static/images/manage_data_cmenu-2.png
A doc/manual/source/_static/images/manage_data_conf.png
A doc/manual/source/_static/images/manage_data_exp.png
A doc/manual/source/_static/images/manage_data_pasw.png
A doc/manual/source/_static/images/manage_data_sync.png
A doc/manual/source/_static/images/manage_data_thelp-1.png
A doc/manual/source/_static/images/manage_data_thelp-2.png
A doc/manual/source/_static/images/master-pw.png
A doc/manual/source/_static/images/model_editor.png
A doc/manual/source/_static/images/mwl-spe-fit-saved.png
A doc/manual/source/_static/images/mwl-spe-fitted.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res.png
A doc/manual/source/_static/images/mwl-spe_spec-decom.png
A doc/manual/source/_static/images/mwl-spec-fit-report.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-1.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-2.png
A doc/manual/source/_static/images/mwl-species-fit.png
A doc/manual/source/_static/images/mwl_species_sim.png
A doc/manual/source/_static/images/mwl_species_simed.png
A doc/manual/source/_static/images/mwlr_spectra_3d.png
A doc/manual/source/_static/images/mwlr_spectra_cont.png
A doc/manual/source/_static/images/mwlr_spectra_f.png
A doc/manual/source/_static/images/mwlr_spectra_o.png
A doc/manual/source/_static/images/mwlr_spectra_save.png
A doc/manual/source/_static/images/mwlr_view_3dplot.png
A doc/manual/source/_static/images/mwlr_view_load.png
A doc/manual/source/_static/images/mwlr_view_pltctrl.png
A doc/manual/source/_static/images/mwlr_viewer.png
A doc/manual/source/_static/images/mwlr_viewer_3d.png
A doc/manual/source/_static/images/mwlr_viewer_ctl.png
A doc/manual/source/_static/images/mwlr_viewer_wvl.png
A doc/manual/source/_static/images/mwlr_viewer_xwavl.png
A doc/manual/source/_static/images/noise_prompt.png
A doc/manual/source/_static/images/noise_vec_db.png
A doc/manual/source/_static/images/norm_gridplot.png
A doc/manual/source/_static/images/optima_config_edit.png
A doc/manual/source/_static/images/optima_config_new.png
A doc/manual/source/_static/images/optima_host_config.png
A doc/manual/source/_static/images/pcsa.png
A doc/manual/source/_static/images/pcsa_3dplot.png
A doc/manual/source/_static/images/pcsa_adv_control.png
A doc/manual/source/_static/images/pcsa_all.png
A doc/manual/source/_static/images/pcsa_analys-line.png
A doc/manual/source/_static/images/pcsa_analys-sigm.png
A doc/manual/source/_static/images/pcsa_bitmap.png
A doc/manual/source/_static/images/pcsa_controls_simulated.png
A doc/manual/source/_static/images/pcsa_main-c.png
A doc/manual/source/_static/images/pcsa_mline_sigm.png
A doc/manual/source/_static/images/pcsa_mline_str.png
A doc/manual/source/_static/images/pcsa_mline_unsim.png
A doc/manual/source/_static/images/pcsa_mlines-line1.png
A doc/manual/source/_static/images/pcsa_mlines-line2.png
A doc/manual/source/_static/images/pcsa_mlines-sigm1.png
A doc/manual/source/_static/images/pcsa_mlines-sigm2.png
A doc/manual/source/_static/images/pcsa_regul.png
A doc/manual/source/_static/images/pcsa_regul_sim.png
A doc/manual/source/_static/images/pcsa_report.png
A doc/manual/source/_static/images/pcsa_res_viewer.png
A doc/manual/source/_static/images/pcsa_resplot.png
A doc/manual/source/_static/images/pcsa_rpscan-auto.png
A doc/manual/source/_static/images/pcsa_rpscan-select.png
A doc/manual/source/_static/images/pcsa_rpscan.png
A doc/manual/source/_static/images/pcsa_rpscan_sim.png
A doc/manual/source/_static/images/pcsa_sigmoid_eq.png
A doc/manual/source/_static/images/pcsa_simulated.png
A doc/manual/source/_static/images/pline_dsig.png
A doc/manual/source/_static/images/pline_power.png
A doc/manual/source/_static/images/pline_stline.png
A doc/manual/source/_static/images/plot_controls.png
A doc/manual/source/_static/images/predict1.png
A doc/manual/source/_static/images/predict2-1.png
A doc/manual/source/_static/images/predict2.png
A doc/manual/source/_static/images/print.png
A doc/manual/source/_static/images/process_crash.png
A doc/manual/source/_static/images/process_crash2.png
A doc/manual/source/_static/images/protocol_development/protocol_development_01.png
A doc/manual/source/_static/images/protocol_development/protocol_development_02.png
A doc/manual/source/_static/images/protocol_development/protocol_development_03.png
A doc/manual/source/_static/images/protocol_development/protocol_development_04.png
A doc/manual/source/_static/images/protocol_development/protocol_development_05.png
A doc/manual/source/_static/images/protocol_development/protocol_development_06.png
A doc/manual/source/_static/images/protocol_development/protocol_development_07.png
A doc/manual/source/_static/images/protocol_development/protocol_development_08.png
A doc/manual/source/_static/images/protocol_development/protocol_development_09.png
A doc/manual/source/_static/images/protocol_development/protocol_development_10.png
A doc/manual/source/_static/images/protocol_development/protocol_development_11.png
A doc/manual/source/_static/images/protocol_development/protocol_development_12.png
A doc/manual/source/_static/images/protocol_development/protocol_development_13.png
A doc/manual/source/_static/images/protocol_development/protocol_development_14.png
A doc/manual/source/_static/images/protocol_development/protocol_development_15.png
A doc/manual/source/_static/images/protocol_development/protocol_development_16.png
A doc/manual/source/_static/images/protocol_development/protocol_development_17.png
A doc/manual/source/_static/images/protocol_development/protocol_development_18.png
A doc/manual/source/_static/images/protocol_development/protocol_development_19.png
A doc/manual/source/_static/images/protocol_development/protocol_development_20.png
A doc/manual/source/_static/images/protocol_development/protocol_development_21.png
A doc/manual/source/_static/images/protocol_development/protocol_development_22.png
A doc/manual/source/_static/images/protocol_development/protocol_development_23.png
A doc/manual/source/_static/images/protocol_development/protocol_development_24.png
A doc/manual/source/_static/images/protocol_development/protocol_development_25.png
A doc/manual/source/_static/images/protocol_development/protocol_development_26.png
A doc/manual/source/_static/images/protocol_development/protocol_development_27.png
A doc/manual/source/_static/images/protocol_development/protocol_development_28.png
A doc/manual/source/_static/images/protocol_development/protocol_development_29.png
A doc/manual/source/_static/images/protocol_development/protocol_development_30.png
A doc/manual/source/_static/images/protocol_development/protocol_development_31.png
A doc/manual/source/_static/images/protocol_development/protocol_development_32.png
A doc/manual/source/_static/images/protocol_development/protocol_development_33.png
A doc/manual/source/_static/images/pseudo-abde-1.png
A doc/manual/source/_static/images/pseudo-abde-2.png
A doc/manual/source/_static/images/pseudo-abde-3.png
A doc/manual/source/_static/images/pseudo-abde-4.png
A doc/manual/source/_static/images/pseudo3d_comb_rmv.png
A doc/manual/source/_static/images/pseudo3d_combine.png
A doc/manual/source/_static/images/register.png
A doc/manual/source/_static/images/register0.png
A doc/manual/source/_static/images/register1.png
A doc/manual/source/_static/images/register2.png
A doc/manual/source/_static/images/register3.png
A doc/manual/source/_static/images/register4.png
A doc/manual/source/_static/images/register5.png
A doc/manual/source/_static/images/report.png
A doc/manual/source/_static/images/reporter-cmenu.png
A doc/manual/source/_static/images/reporter-details.png
A doc/manual/source/_static/images/reporter-loadprof.png
A doc/manual/source/_static/images/reporter-save.png
A doc/manual/source/_static/images/reporter-saveprof.png
A doc/manual/source/_static/images/reporter-view.png
A doc/manual/source/_static/images/reporter-viewitem.png
A doc/manual/source/_static/images/reporter.png
A doc/manual/source/_static/images/residualplot.png
A doc/manual/source/_static/images/residuals.png
A doc/manual/source/_static/images/rmsd_query-c.png
A doc/manual/source/_static/images/rmsd_query-o.png
A doc/manual/source/_static/images/rotor-add.png
A doc/manual/source/_static/images/rotor-save-calibration.png
A doc/manual/source/_static/images/rotor.png
A doc/manual/source/_static/images/rotorstretch-0.png
A doc/manual/source/_static/images/rotorstretch-1.png
A doc/manual/source/_static/images/rotorstretch-2.png
A doc/manual/source/_static/images/rotorstretch-3.png
A doc/manual/source/_static/images/rotorstretch-4.png
A doc/manual/source/_static/images/rotorstretch-5.png
A doc/manual/source/_static/images/rotorstretch-6.png
A doc/manual/source/_static/images/rotorstretch-7.png
A doc/manual/source/_static/images/rotorstretch_report.png
A doc/manual/source/_static/images/run_details.png
A doc/manual/source/_static/images/s20W_bar.png
A doc/manual/source/_static/images/sassoc.png
A doc/manual/source/_static/images/save_colormap.png
A doc/manual/source/_static/images/second_moment.png
A doc/manual/source/_static/images/select_edits.png
A doc/manual/source/_static/images/select_runs.png
A doc/manual/source/_static/images/sequence.png
A doc/manual/source/_static/images/set-zvalue.png
A doc/manual/source/_static/images/simparams.png
A doc/manual/source/_static/images/simulatedReport.png
A doc/manual/source/_static/images/solution_edit.png
A doc/manual/source/_static/images/solution_new.png
A doc/manual/source/_static/images/solution_select.png
A doc/manual/source/_static/images/solution_settings.png
A doc/manual/source/_static/images/somo/somo_icon.png
A doc/manual/source/_static/images/spectrum_extinction.png
A doc/manual/source/_static/images/sw_spectrum.png
A doc/manual/source/_static/images/time_derivative.png
A doc/manual/source/_static/images/timestate-0.png
A doc/manual/source/_static/images/timestate-1.png
A doc/manual/source/_static/images/timestate-2.png
A doc/manual/source/_static/images/timestate-3.png
A doc/manual/source/_static/images/timestate-4.png
A doc/manual/source/_static/images/ultra.xpm
A doc/manual/source/_static/images/ultrascan3.png
A doc/manual/source/_static/images/upload_fit_spectrum.png
A doc/manual/source/_static/images/us_buffer.png
A doc/manual/source/_static/images/us_buffer_spect.png
A doc/manual/source/_static/images/us_buoyanc-2.png
A doc/manual/source/_static/images/us_buoyanc.png
A doc/manual/source/_static/images/us_conv-RA.png
A doc/manual/source/_static/images/us_convert/us_convert_01.png
A doc/manual/source/_static/images/us_convert/us_convert_02.png
A doc/manual/source/_static/images/us_convert/us_convert_03.png
A doc/manual/source/_static/images/us_convert/us_convert_04.png
A doc/manual/source/_static/images/us_convert/us_convert_05.png
A doc/manual/source/_static/images/us_convert/us_convert_06.png
A doc/manual/source/_static/images/us_convert/us_convert_07.png
A doc/manual/source/_static/images/us_convert/us_convert_08.png
A doc/manual/source/_static/images/us_convert/us_convert_09.png
A doc/manual/source/_static/images/us_convert/us_convert_10.png
A doc/manual/source/_static/images/us_convert/us_convert_11.png
A doc/manual/source/_static/images/us_convert/us_convert_12.png
A doc/manual/source/_static/images/us_convert/us_convert_13.png
A doc/manual/source/_static/images/us_convert/us_convert_14.png
A doc/manual/source/_static/images/us_convert_01.png
A doc/manual/source/_static/images/us_convert_02.png
A doc/manual/source/_static/images/us_convert_03.png
A doc/manual/source/_static/images/us_convert_04.png
A doc/manual/source/_static/images/us_convert_05.png
A doc/manual/source/_static/images/us_convert_06.png
A doc/manual/source/_static/images/us_convert_07.png
A doc/manual/source/_static/images/us_convert_08.png
A doc/manual/source/_static/images/us_convert_09.png
A doc/manual/source/_static/images/us_convert_10.png
A doc/manual/source/_static/images/us_convert_11.png
A doc/manual/source/_static/images/us_convert_12.png
A doc/manual/source/_static/images/us_convert_13.png
A doc/manual/source/_static/images/us_convert_14.png
A doc/manual/source/_static/images/us_convert_definedscans.png
A doc/manual/source/_static/images/us_convert_definesubset.png
A doc/manual/source/_static/images/us_edit.png
A doc/manual/source/_static/images/us_edit_mwl.png
A doc/manual/source/_static/images/us_equiltime.png
A doc/manual/source/_static/images/us_extinction-0.png
A doc/manual/source/_static/images/us_extinction-00.png
A doc/manual/source/_static/images/us_extinction-000.png
A doc/manual/source/_static/images/us_extinction-1.png
A doc/manual/source/_static/images/us_extinction-2.png
A doc/manual/source/_static/images/us_extinction-3.png
A doc/manual/source/_static/images/us_fds_filemanager-0.png
A doc/manual/source/_static/images/us_fds_filemanager-1.png
A doc/manual/source/_static/images/us_fds_filemanager-2.png
A doc/manual/source/_static/images/us_fds_filemanager-3.png
A doc/manual/source/_static/images/us_fds_filemanager-4.png
A doc/manual/source/_static/images/us_investigator-2.png
A doc/manual/source/_static/images/us_investigator.png
A doc/manual/source/_static/images/us_modelmetrics-0.png
A doc/manual/source/_static/images/us_modmet_report.png
A doc/manual/source/_static/images/us_project.png
A doc/manual/source/_static/images/us_project1.png
A doc/manual/source/_static/images/us_project2.png
A doc/manual/source/_static/images/us_project3.png
A doc/manual/source/_static/images/us_project_add-supdata.png
A doc/manual/source/_static/images/us_project_edit-supdata.png
A doc/manual/source/_static/images/us_project_web.png
A doc/manual/source/_static/images/us_project_webed.png
A doc/manual/source/_static/images/us_solution1.png
A doc/manual/source/_static/images/us_solution2.png
A doc/manual/source/_static/images/us_solution3.png
A doc/manual/source/_static/images/us_spectrum-0.png
A doc/manual/source/_static/images/us_spectrum-1.png
A doc/manual/source/_static/images/us_spectrum-load.png
A doc/manual/source/_static/images/usfont-1.png
A doc/manual/source/_static/images/usfont-2.png
A doc/manual/source/_static/images/vhw_combine-combo.png
A doc/manual/source/_static/images/vhw_combine-envel.png
A doc/manual/source/_static/images/vhw_combine-selrun.png
A doc/manual/source/_static/images/vhw_combine.png
A doc/manual/source/_static/images/vhw_distribution.png
A doc/manual/source/_static/images/vhw_enh_groups.png
A doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/_static/images/vhw_enh_groups_res.png
A doc/manual/source/_static/images/vhw_enhanced.png
A doc/manual/source/_static/images/vhw_histogram.png
A doc/manual/source/_static/images/xpn_report1.png
A doc/manual/source/_static/images/xpn_report2.png
A doc/manual/source/_static/images/xpn_viewer-loaded.png
A doc/manual/source/_static/images/xpn_viewer-saved.png
A doc/manual/source/_static/images/xpn_viewer.png
A doc/manual/source/_static/images/zvalue_eq.png
A doc/manual/source/_static/language_data.js
A doc/manual/source/_static/sphinx_highlight.js
A doc/manual/source/analyte/analyte_edit.rst
A doc/manual/source/analyte/analyte_new.rst
A doc/manual/source/analyte/analyte_select.rst
A doc/manual/source/analyte/analyte_settings.rst
A doc/manual/source/analyte/index.rst
A doc/manual/source/associations.rst
A doc/manual/source/astfem_sim.rst
A doc/manual/source/beckman_openauc.rst
A doc/manual/source/buffer/buffer_edit.rst
A doc/manual/source/buffer/buffer_new.rst
A doc/manual/source/buffer/buffer_select.rst
A doc/manual/source/buffer/buffer_settings.rst
A doc/manual/source/buffer/index.rst
A doc/manual/source/buoyancy_editor.rst
A doc/manual/source/colorgradient.rst
A doc/manual/source/combine_models.rst
A doc/manual/source/common_dialogs.rst
A doc/manual/source/components.rst
A doc/manual/source/config.rst
A doc/manual/source/convert.rst
A doc/manual/source/ddist_combine.rst
A doc/manual/source/dens_match.rst
A doc/manual/source/dmga_init.rst
A doc/manual/source/dmga_init_constr.rst
A doc/manual/source/experiment/cells.rst
A doc/manual/source/experiment/general.rst
A doc/manual/source/experiment/import.rst
A doc/manual/source/experiment/index.rst
A doc/manual/source/experiment/liveupdate.rst
A doc/manual/source/experiment/optics.rst
A doc/manual/source/experiment/range.rst
A doc/manual/source/experiment/rotor.rst
A doc/manual/source/experiment/solutions.rst
A doc/manual/source/experiment/speeds.rst
A doc/manual/source/experiment/submit.rst
A doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_match_adv.rst
A doc/manual/source/fe_match/fe_match_main.rst
A doc/manual/source/fe_match/fe_match_simulate.rst
A doc/manual/source/fe_match/index.rst
A doc/manual/source/fit_meniscus.rst
A doc/manual/source/ga_initialize.rst
A doc/manual/source/gmp/gmp.rst
A doc/manual/source/gmp/gmp_audit_trail.rst
A doc/manual/source/gmp/gmp_automation.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
A doc/manual/source/gmp/gmp_data_acquisition/index.rst
A doc/manual/source/gmp/gmp_protocol_development.rst
A doc/manual/source/gmp/gmp_report_generator.rst
A doc/manual/source/gmp/gmp_signature.rst
A doc/manual/source/gmp/index.rst
A doc/manual/source/grid_editor.rst
A doc/manual/source/idist_combine.rst
A doc/manual/source/manage_data.rst
A doc/manual/source/model_editor.rst
A doc/manual/source/multi-wavelength/index.rst
A doc/manual/source/multi-wavelength/mwl_species_fit.rst
A doc/manual/source/multi-wavelength/mwl_species_sim.rst
A doc/manual/source/multi-wavelength/mwl_spectra.rst
A doc/manual/source/multi-wavelength/mwlr_viewer.rst
A doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/pcsa.rst
A doc/manual/source/pcsa/pcsa_adv.rst
A doc/manual/source/pcsa/pcsa_analys.rst
A doc/manual/source/pcsa/pcsa_mlines.rst
A doc/manual/source/pcsa/pcsa_results.rst
A doc/manual/source/pcsa/pcsa_rpscan.rst
A doc/manual/source/predict1.rst
A doc/manual/source/predict2.rst
A doc/manual/source/pseudo3d.rst
A doc/manual/source/register.rst
A doc/manual/source/reporter.rst
A doc/manual/source/rmsd_query.rst
A doc/manual/source/rotor.rst
A doc/manual/source/rotor_calibration.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page-abde.rst
A doc/manual/source/start_page-dm.rst
A doc/manual/source/start_page-int.rst
A doc/manual/source/start_page-mw.rst
A doc/manual/source/start_page-new.rst
A doc/manual/source/start_page-rpt.rst
A doc/manual/source/start_page.rst
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Expand UltraScan-III documentation: add detailed GMP workflow guides, including protocol development, automation, e-signatures, report generation, and data acquisition.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 518c1ee39c53443282fc68ec37cc855b2e5aa4f0
https://github.com/ehb54/ultrascan3/commit/518c1ee39c53443282fc68ec37cc855b2e5aa4f0
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update Sphinx configuration: adjust LaTeX preamble for header height and standardize document titles across output formats.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 2946f944109702806ad7b25d283b258d3702adfa
https://github.com/ehb54/ultrascan3/commit/2946f944109702806ad7b25d283b258d3702adfa
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Standardize "Optima" capitalization across XPN Viewer documentation.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 34d316c7e97fcdabcf86b0939a85e834d6d878f6
https://github.com/ehb54/ultrascan3/commit/34d316c7e97fcdabcf86b0939a85e834d6d878f6
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
Fix typo in vHW documentation: correct "Wieschet" to "Weischet".
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 56e8463890e60e8501b4233fb88a6dd74f0e39f4
https://github.com/ehb54/ultrascan3/commit/56e8463890e60e8501b4233fb88a6dd74f0e39f4
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/index.rst
Log Message:
-----------
Update Ultrascan-III website URL in documentation.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: ff5165410e579e9e3bf489cf74532942d4dd1b6d
https://github.com/ehb54/ultrascan3/commit/ff5165410e579e9e3bf489cf74532942d4dd1b6d
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/config.rst
Log Message:
-----------
Revise configuration documentation: clarify directory descriptions, standardize terminology, improve debugging/debug level explanations, and update Optima panel section with centered image and corrected details.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 9d89cccbd5d1edac19f5118f9f73b017b4b62768
https://github.com/ehb54/ultrascan3/commit/9d89cccbd5d1edac19f5118f9f73b017b4b62768
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/experiment/import.rst
Log Message:
-----------
Fix image filename in import documentation: correct "Triplicate" to "triple".
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 20e6e37595eff7fcd8c617c1ae65f049be8e60f5
https://github.com/ehb54/ultrascan3/commit/20e6e37595eff7fcd8c617c1ae65f049be8e60f5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
A doc/manual/source/auto_index.py
Log Message:
-----------
Add Sphinx transform for auto-generating index entries from section titles.
Commit: 78763cd74bcca991929a7dc53e314e9e61a755b6
https://github.com/ehb54/ultrascan3/commit/78763cd74bcca991929a7dc53e314e9e61a755b6
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update Sphinx configuration: add `auto_index` extension and adjust sys.path setup for dynamic module resolution.
Commit: e67f33a49e896d701d7a71317d8d8b2dcebb45a9
https://github.com/ehb54/ultrascan3/commit/e67f33a49e896d701d7a71317d8d8b2dcebb45a9
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
R doc/manual/source/_static/images/optima_config_edit.png
M doc/manual/source/_static/images/optima_config_new.png
Log Message:
-----------
Update Optima configuration images in documentation: delete outdated file and revise new image.
Commit: a0df61141d5869a4c8d57ccdaf8896b84fbf1add
https://github.com/ehb54/ultrascan3/commit/a0df61141d5869a4c8d57ccdaf8896b84fbf1add
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/config.rst
Log Message:
-----------
Standardize header formatting in configuration documentation: adjust underline lengths and update section titles for consistency.
Commit: 20a795daec1d9d2b8a1e99a9522c5b0f39516f9f
https://github.com/ehb54/ultrascan3/commit/20a795daec1d9d2b8a1e99a9522c5b0f39516f9f
Author: doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update Sphinx configuration: fix sys.path insertion to correctly add the current directory.
Signed-off-by: doluk <69309597+doluk at users.noreply.github.com>
Commit: 7022886ca10e06e291974dd36c40d68886f97592
https://github.com/ehb54/ultrascan3/commit/7022886ca10e06e291974dd36c40d68886f97592
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_adv.rst
Log Message:
-----------
Update doc/manual/source/2dsa/2dsa_adv.rst
Co-authored-by: Copilot <175728472+Copilot at users.noreply.github.com>
Commit: fec01135a70f30bb6fe279c6355c6d8d46e50f02
https://github.com/ehb54/ultrascan3/commit/fec01135a70f30bb6fe279c6355c6d8d46e50f02
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2026-04-03 (Fri, 03 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
Log Message:
-----------
Update doc/manual/source/2dsa/2dsa_analys.rst
Co-authored-by: Copilot <175728472+Copilot at users.noreply.github.com>
Commit: 213c7d1f346ca9afa40c688dc5d4daae4e55d79f
https://github.com/ehb54/ultrascan3/commit/213c7d1f346ca9afa40c688dc5d4daae4e55d79f
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
R doc/manual/source/_static/css/custom.css
M doc/manual/source/_static/custom.css
Log Message:
-----------
Remove unused `custom.css` file and retain only essential styles in `custom.css` for cleaner documentation styling.
Commit: f31826280b208f87c2044d91ceed9b3b725941b8
https://github.com/ehb54/ultrascan3/commit/f31826280b208f87c2044d91ceed9b3b725941b8
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/_static/images/gmp/automation/auto_edit.png
M doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
M doc/manual/source/_static/images/gmp/automation/lims.png
M doc/manual/source/_static/images/reporter-cmenu.png
M doc/manual/source/_static/images/us_project_webed.png
Log Message:
-----------
Downscale extremely large images
Commit: 0d8aa5eb3868f4fa28393c667f367905088267c1
https://github.com/ehb54/ultrascan3/commit/0d8aa5eb3868f4fa28393c667f367905088267c1
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Add support for qthelp exclusive css file
Commit: 50222b23f0a251076777810ba005c924ef2ddb00
https://github.com/ehb54/ultrascan3/commit/50222b23f0a251076777810ba005c924ef2ddb00
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
A doc/manual/source/_static/qthelp.css
Log Message:
-----------
Add `qthelp.css` file to define default styling for QtHelp documentation
Commit: 86fcf7036c1ad44220fbb6544552d2e7458fd76e
https://github.com/ehb54/ultrascan3/commit/86fcf7036c1ad44220fbb6544552d2e7458fd76e
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/3d_plot.rst
M doc/manual/source/config.rst
M doc/manual/source/fit_meniscus.rst
M doc/manual/source/pseudo3d.rst
Log Message:
-----------
Standardize help text and add debug text options in configuration documentation.
Commit: 38351d9b483d34b0d464cdc0a02cf4d0c711a5f0
https://github.com/ehb54/ultrascan3/commit/38351d9b483d34b0d464cdc0a02cf4d0c711a5f0
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/auto_index.py
Log Message:
-----------
Refine `auto_index` title processing: improve whitespace handling, enhance dimensional notation standardization, and ensure title case consistency.
Commit: 881728a585525975764e48eb87de544e1a8f5ed6
https://github.com/ehb54/ultrascan3/commit/881728a585525975764e48eb87de544e1a8f5ed6
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
Log Message:
-----------
Standardize section headers and titles in FE Match documentation for consistency and improve formatting.
Commit: 278eeecf4ee5b0f5e03bbcd8eae65e831f15837b
https://github.com/ehb54/ultrascan3/commit/278eeecf4ee5b0f5e03bbcd8eae65e831f15837b
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_distrib_plot.rst
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
Standardize "van Holde-Weischet" terminology across documentation for improved consistency.
Commit: 99bbe83fea89b40008e71864323759b4a75ff8cb
https://github.com/ehb54/ultrascan3/commit/99bbe83fea89b40008e71864323759b4a75ff8cb
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/start_page-rpt.rst
Log Message:
-----------
Standardize section headers, titles, and dimensional notations in documentation for improved formatting and consistency.
Commit: 75a2cca73b6cec686f996d57da668814a975dfc6
https://github.com/ehb54/ultrascan3/commit/75a2cca73b6cec686f996d57da668814a975dfc6
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/CMakeLists.txt
A doc/manual/source/2dsa/2dsa_adv.rst
A doc/manual/source/2dsa/2dsa_analys.rst
A doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/2dsa/index.rst
A doc/manual/source/3000_rpm.rst
A doc/manual/source/3d_plot.rst
R doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/custom.css
A doc/manual/source/_static/images/2dsa_3dplot.png
A doc/manual/source/_static/images/2dsa_advan.png
A doc/manual/source/_static/images/2dsa_analvv.png
A doc/manual/source/_static/images/2dsa_analys.png
A doc/manual/source/_static/images/2dsa_main-c.png
A doc/manual/source/_static/images/2dsa_main-o.png
A doc/manual/source/_static/images/2dsa_resplot.png
A doc/manual/source/_static/images/D20W_bar.png
A doc/manual/source/_static/images/MW-bar.png
A doc/manual/source/_static/images/RINplot.png
A doc/manual/source/_static/images/TINplot.png
A doc/manual/source/_static/images/UltraScan-logo.png
A doc/manual/source/_static/images/abde-1.png
A doc/manual/source/_static/images/add_RIN-TIN.png
A doc/manual/source/_static/images/add_RIN.png
A doc/manual/source/_static/images/add_TIN.png
A doc/manual/source/_static/images/advanced_config.png
A doc/manual/source/_static/images/analyte_details.png
A doc/manual/source/_static/images/analyte_edit.png
A doc/manual/source/_static/images/analyte_edit_spec.png
A doc/manual/source/_static/images/analyte_new_sequence.png
A doc/manual/source/_static/images/analyte_newc.png
A doc/manual/source/_static/images/analyte_newd.png
A doc/manual/source/_static/images/analyte_newp.png
A doc/manual/source/_static/images/analyte_selectc.png
A doc/manual/source/_static/images/analyte_selectd.png
A doc/manual/source/_static/images/analyte_selectp.png
A doc/manual/source/_static/images/analyte_sequence.png
A doc/manual/source/_static/images/analyte_settings.png
A doc/manual/source/_static/images/analyte_spec-gui.png
A doc/manual/source/_static/images/analyte_specmenu.png
A doc/manual/source/_static/images/analyte_spectrum.png
A doc/manual/source/_static/images/analytes.png
A doc/manual/source/_static/images/associations.png
A doc/manual/source/_static/images/astfem_sim.png
A doc/manual/source/_static/images/bad_grid.png
A doc/manual/source/_static/images/beck_convert-2.png
A doc/manual/source/_static/images/beck_converter.png
A doc/manual/source/_static/images/bitmap.png
A doc/manual/source/_static/images/buffer_edit.png
A doc/manual/source/_static/images/buffer_edit_setting.png
A doc/manual/source/_static/images/buffer_edit_spectrum.png
A doc/manual/source/_static/images/buffer_info.png
A doc/manual/source/_static/images/buffer_manage_spectrum.png
A doc/manual/source/_static/images/buffer_new.png
A doc/manual/source/_static/images/buffer_new_spectrum.png
A doc/manual/source/_static/images/buffer_select.png
A doc/manual/source/_static/images/buffer_settings.png
A doc/manual/source/_static/images/buffer_spectrum.png
A doc/manual/source/_static/images/cfa_view-loadauc.png
A doc/manual/source/_static/images/cfa_view-loadraw.png
A doc/manual/source/_static/images/cfa_view-main.png
A doc/manual/source/_static/images/cfa_view-statsauc.png
A doc/manual/source/_static/images/cfa_view-statsraw.png
A doc/manual/source/_static/images/color-1.png
A doc/manual/source/_static/images/color-2.png
A doc/manual/source/_static/images/color-a.png
A doc/manual/source/_static/images/color-b.png
A doc/manual/source/_static/images/colorgrad1.png
A doc/manual/source/_static/images/colorgradient/col1_colgen.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/_static/images/colorgradient/col2_colgen.png
A doc/manual/source/_static/images/colorgradient/colorgrad.png
A doc/manual/source/_static/images/colorgradient/colorgradient_main.png
A doc/manual/source/_static/images/colorgradient/components.png
A doc/manual/source/_static/images/colorgradient/model_editor.png
A doc/manual/source/_static/images/combine_models-idedit.png
A doc/manual/source/_static/images/combine_models-save.png
A doc/manual/source/_static/images/combine_models.png
A doc/manual/source/_static/images/components.png
A doc/manual/source/_static/images/config.png
A doc/manual/source/_static/images/config1.png
A doc/manual/source/_static/images/config2.png
A doc/manual/source/_static/images/config_plot.png
A doc/manual/source/_static/images/convert-RIdata.png
A doc/manual/source/_static/images/convert-exclude.png
A doc/manual/source/_static/images/convert-experiment.png
A doc/manual/source/_static/images/convert-mwl.png
A doc/manual/source/_static/images/convert-seltrip.png
A doc/manual/source/_static/images/convert-subset.png
A doc/manual/source/_static/images/convert-tolerance.png
A doc/manual/source/_static/images/convert.png
A doc/manual/source/_static/images/custom_grid-1.png
A doc/manual/source/_static/images/custom_grid.png
A doc/manual/source/_static/images/data_converter.png
A doc/manual/source/_static/images/data_loader-edits.png
A doc/manual/source/_static/images/data_loader-trips.png
A doc/manual/source/_static/images/data_loader.png
A doc/manual/source/_static/images/database.png
A doc/manual/source/_static/images/ddist_combine-selrun.png
A doc/manual/source/_static/images/ddist_combine.png
A doc/manual/source/_static/images/densmatch_main.png
A doc/manual/source/_static/images/densmatch_mpars_completed.png
A doc/manual/source/_static/images/densmatch_mpars_empty.png
A doc/manual/source/_static/images/densmatch_rmvmodels.png
A doc/manual/source/_static/images/edit_buffer_spec_menu.png
A doc/manual/source/_static/images/eq1-mean.png
A doc/manual/source/_static/images/eq2-skew.png
A doc/manual/source/_static/images/eq3-kurtosis.png
A doc/manual/source/_static/images/eq4-moments.png
A doc/manual/source/_static/images/eq5-variance.png
A doc/manual/source/_static/images/eq6-stddev.png
A doc/manual/source/_static/images/eq7-probsigma.png
A doc/manual/source/_static/images/eq8-confidence.png
A doc/manual/source/_static/images/experiment_cells.png
A doc/manual/source/_static/images/experiment_edit.png
A doc/manual/source/_static/images/experiment_general.png
A doc/manual/source/_static/images/experiment_import.png
A doc/manual/source/_static/images/experiment_liveupdate.png
A doc/manual/source/_static/images/experiment_liveupdate_run.png
A doc/manual/source/_static/images/experiment_optics.png
A doc/manual/source/_static/images/experiment_overview.png
A doc/manual/source/_static/images/experiment_photomult.png
A doc/manual/source/_static/images/experiment_range.png
A doc/manual/source/_static/images/experiment_range_details.png
A doc/manual/source/_static/images/experiment_range_selector.png
A doc/manual/source/_static/images/experiment_range_selmanual.png
A doc/manual/source/_static/images/experiment_rotor.png
A doc/manual/source/_static/images/experiment_solutions.png
A doc/manual/source/_static/images/experiment_solutions_comments.png
A doc/manual/source/_static/images/experiment_speeds.png
A doc/manual/source/_static/images/experiment_submit.png
A doc/manual/source/_static/images/experiment_submit_details.png
A doc/manual/source/_static/images/experiment_upload.png
A doc/manual/source/_static/images/export_leg_1.png
A doc/manual/source/_static/images/export_leg_RA.png
A doc/manual/source/_static/images/export_leg_RI.png
A doc/manual/source/_static/images/export_leg_auc.png
A doc/manual/source/_static/images/export_leg_beck.png
A doc/manual/source/_static/images/export_legacy.png
A doc/manual/source/_static/images/fe_load_data.png
A doc/manual/source/_static/images/fe_load_model_distrib.png
A doc/manual/source/_static/images/fe_match.png
A doc/manual/source/_static/images/fe_match_3dplot.png
A doc/manual/source/_static/images/fe_match_adv.png
A doc/manual/source/_static/images/fe_match_all.png
A doc/manual/source/_static/images/fe_match_allct.png
A doc/manual/source/_static/images/fe_match_lddat1.png
A doc/manual/source/_static/images/fe_match_lddat2.png
A doc/manual/source/_static/images/fe_match_lddat3.png
A doc/manual/source/_static/images/fe_match_lddat4.png
A doc/manual/source/_static/images/fe_match_ra.png
A doc/manual/source/_static/images/fe_match_resplot.png
A doc/manual/source/_static/images/fe_match_sim1.png
A doc/manual/source/_static/images/fe_match_sim2.png
A doc/manual/source/_static/images/fe_match_sim3_1b.png
A doc/manual/source/_static/images/fe_match_sim3_1p.png
A doc/manual/source/_static/images/fe_match_sim3_2b.png
A doc/manual/source/_static/images/fe_match_sim3_2p.png
A doc/manual/source/_static/images/fe_match_sim3_3b.png
A doc/manual/source/_static/images/fe_match_sim3_4b.png
A doc/manual/source/_static/images/fe_match_sim3_5b.png
A doc/manual/source/_static/images/fe_match_sim3_5p.png
A doc/manual/source/_static/images/fe_match_sim3_6b.png
A doc/manual/source/_static/images/fe_match_sim3_7b.png
A doc/manual/source/_static/images/fe_match_sim3_8b.png
A doc/manual/source/_static/images/fe_match_sim4.png
A doc/manual/source/_static/images/fe_match_sim5.png
A doc/manual/source/_static/images/fe_match_sim6.png
A doc/manual/source/_static/images/fe_match_sim7.png
A doc/manual/source/_static/images/fe_match_simulated.png
A doc/manual/source/_static/images/fe_match_viewer.png
A doc/manual/source/_static/images/fe_sim-1.png
A doc/manual/source/_static/images/fe_sim-2.png
A doc/manual/source/_static/images/fit_men-editupd.png
A doc/manual/source/_static/images/fit_men-load.png
A doc/manual/source/_static/images/fit_men_bot.png
A doc/manual/source/_static/images/fit_meniscus.png
A doc/manual/source/_static/images/ga_initialize-o.png
A doc/manual/source/_static/images/ga_initialize-p.png
A doc/manual/source/_static/images/ga_initialize.png
A doc/manual/source/_static/images/ga_report-1.png
A doc/manual/source/_static/images/ga_report-2.png
A doc/manual/source/_static/images/ga_report-3.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/_static/images/gmp/automation/2dsa.png
A doc/manual/source/_static/images/gmp/automation/2dsa_it.png
A doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
A doc/manual/source/_static/images/gmp/automation/Aprofile.png
A doc/manual/source/_static/images/gmp/automation/analysis.png
A doc/manual/source/_static/images/gmp/automation/auto_edit.png
A doc/manual/source/_static/images/gmp/automation/bitmap.png
A doc/manual/source/_static/images/gmp/automation/cells.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/_static/images/gmp/automation/lims.png
A doc/manual/source/_static/images/gmp/automation/main_window.png
A doc/manual/source/_static/images/gmp/automation/man_edit.png
A doc/manual/source/_static/images/gmp/automation/optics.png
A doc/manual/source/_static/images/gmp/automation/pcsa.png
A doc/manual/source/_static/images/gmp/automation/pcsa_report.png
A doc/manual/source/_static/images/gmp/automation/plot.png
A doc/manual/source/_static/images/gmp/automation/ranges.png
A doc/manual/source/_static/images/gmp/automation/report_editor.png
A doc/manual/source/_static/images/gmp/automation/rotor.png
A doc/manual/source/_static/images/gmp/automation/solutions.png
A doc/manual/source/_static/images/gmp/automation/speed.png
A doc/manual/source/_static/images/gmp/automation/submit.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/_static/images/gmp/gmp.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/_static/images/gmp/vhw_distribution.png
A doc/manual/source/_static/images/good_grid.png
A doc/manual/source/_static/images/grid-setup.png
A doc/manual/source/_static/images/grid_editor.png
A doc/manual/source/_static/images/grid_editor_multi_grids.png
A doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
A doc/manual/source/_static/images/grid_editor_mw_view.png
A doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid1-good.png
A doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid2-good.png
A doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid3-good.png
A doc/manual/source/_static/images/hori_cs.png
A doc/manual/source/_static/images/idist_comb_selPre.png
A doc/manual/source/_static/images/idist_comb_seldis.png
A doc/manual/source/_static/images/idist_combine.png
A doc/manual/source/_static/images/import_drop-triple.png
A doc/manual/source/_static/images/incr_sigmoid.png
A doc/manual/source/_static/images/load_auc-search.png
A doc/manual/source/_static/images/load_auc-trips.png
A doc/manual/source/_static/images/load_auc.png
A doc/manual/source/_static/images/load_colormap.png
A doc/manual/source/_static/images/load_model_dis-MID.png
A doc/manual/source/_static/images/load_model_distrib.png
A doc/manual/source/_static/images/load_noise.png
A doc/manual/source/_static/images/load_noise_details.png
A doc/manual/source/_static/images/loaded_mwl-specfit.png
A doc/manual/source/_static/images/manage_data.png
A doc/manual/source/_static/images/manage_data_bhide.png
A doc/manual/source/_static/images/manage_data_bshow.png
A doc/manual/source/_static/images/manage_data_cmenu-1.png
A doc/manual/source/_static/images/manage_data_cmenu-2.png
A doc/manual/source/_static/images/manage_data_conf.png
A doc/manual/source/_static/images/manage_data_exp.png
A doc/manual/source/_static/images/manage_data_pasw.png
A doc/manual/source/_static/images/manage_data_sync.png
A doc/manual/source/_static/images/manage_data_thelp-1.png
A doc/manual/source/_static/images/manage_data_thelp-2.png
A doc/manual/source/_static/images/master-pw.png
A doc/manual/source/_static/images/model_editor.png
A doc/manual/source/_static/images/mwl-spe-fit-saved.png
A doc/manual/source/_static/images/mwl-spe-fitted.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res.png
A doc/manual/source/_static/images/mwl-spe_spec-decom.png
A doc/manual/source/_static/images/mwl-spec-fit-report.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-1.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-2.png
A doc/manual/source/_static/images/mwl-species-fit.png
A doc/manual/source/_static/images/mwl_species_sim.png
A doc/manual/source/_static/images/mwl_species_simed.png
A doc/manual/source/_static/images/mwlr_spectra_3d.png
A doc/manual/source/_static/images/mwlr_spectra_cont.png
A doc/manual/source/_static/images/mwlr_spectra_f.png
A doc/manual/source/_static/images/mwlr_spectra_o.png
A doc/manual/source/_static/images/mwlr_spectra_save.png
A doc/manual/source/_static/images/mwlr_view_3dplot.png
A doc/manual/source/_static/images/mwlr_view_load.png
A doc/manual/source/_static/images/mwlr_view_pltctrl.png
A doc/manual/source/_static/images/mwlr_viewer.png
A doc/manual/source/_static/images/mwlr_viewer_3d.png
A doc/manual/source/_static/images/mwlr_viewer_ctl.png
A doc/manual/source/_static/images/mwlr_viewer_wvl.png
A doc/manual/source/_static/images/mwlr_viewer_xwavl.png
A doc/manual/source/_static/images/noise_prompt.png
A doc/manual/source/_static/images/noise_vec_db.png
A doc/manual/source/_static/images/norm_gridplot.png
A doc/manual/source/_static/images/optima_config_new.png
A doc/manual/source/_static/images/optima_host_config.png
A doc/manual/source/_static/images/pcsa.png
A doc/manual/source/_static/images/pcsa_3dplot.png
A doc/manual/source/_static/images/pcsa_adv_control.png
A doc/manual/source/_static/images/pcsa_all.png
A doc/manual/source/_static/images/pcsa_analys-line.png
A doc/manual/source/_static/images/pcsa_analys-sigm.png
A doc/manual/source/_static/images/pcsa_bitmap.png
A doc/manual/source/_static/images/pcsa_controls_simulated.png
A doc/manual/source/_static/images/pcsa_main-c.png
A doc/manual/source/_static/images/pcsa_mline_sigm.png
A doc/manual/source/_static/images/pcsa_mline_str.png
A doc/manual/source/_static/images/pcsa_mline_unsim.png
A doc/manual/source/_static/images/pcsa_mlines-line1.png
A doc/manual/source/_static/images/pcsa_mlines-line2.png
A doc/manual/source/_static/images/pcsa_mlines-sigm1.png
A doc/manual/source/_static/images/pcsa_mlines-sigm2.png
A doc/manual/source/_static/images/pcsa_regul.png
A doc/manual/source/_static/images/pcsa_regul_sim.png
A doc/manual/source/_static/images/pcsa_report.png
A doc/manual/source/_static/images/pcsa_res_viewer.png
A doc/manual/source/_static/images/pcsa_resplot.png
A doc/manual/source/_static/images/pcsa_rpscan-auto.png
A doc/manual/source/_static/images/pcsa_rpscan-select.png
A doc/manual/source/_static/images/pcsa_rpscan.png
A doc/manual/source/_static/images/pcsa_rpscan_sim.png
A doc/manual/source/_static/images/pcsa_sigmoid_eq.png
A doc/manual/source/_static/images/pcsa_simulated.png
A doc/manual/source/_static/images/pline_dsig.png
A doc/manual/source/_static/images/pline_power.png
A doc/manual/source/_static/images/pline_stline.png
A doc/manual/source/_static/images/plot_controls.png
A doc/manual/source/_static/images/predict1.png
A doc/manual/source/_static/images/predict2-1.png
A doc/manual/source/_static/images/predict2.png
A doc/manual/source/_static/images/print.png
A doc/manual/source/_static/images/process_crash.png
A doc/manual/source/_static/images/process_crash2.png
A doc/manual/source/_static/images/protocol_development/protocol_development_01.png
A doc/manual/source/_static/images/protocol_development/protocol_development_02.png
A doc/manual/source/_static/images/protocol_development/protocol_development_03.png
A doc/manual/source/_static/images/protocol_development/protocol_development_04.png
A doc/manual/source/_static/images/protocol_development/protocol_development_05.png
A doc/manual/source/_static/images/protocol_development/protocol_development_06.png
A doc/manual/source/_static/images/protocol_development/protocol_development_07.png
A doc/manual/source/_static/images/protocol_development/protocol_development_08.png
A doc/manual/source/_static/images/protocol_development/protocol_development_09.png
A doc/manual/source/_static/images/protocol_development/protocol_development_10.png
A doc/manual/source/_static/images/protocol_development/protocol_development_11.png
A doc/manual/source/_static/images/protocol_development/protocol_development_12.png
A doc/manual/source/_static/images/protocol_development/protocol_development_13.png
A doc/manual/source/_static/images/protocol_development/protocol_development_14.png
A doc/manual/source/_static/images/protocol_development/protocol_development_15.png
A doc/manual/source/_static/images/protocol_development/protocol_development_16.png
A doc/manual/source/_static/images/protocol_development/protocol_development_17.png
A doc/manual/source/_static/images/protocol_development/protocol_development_18.png
A doc/manual/source/_static/images/protocol_development/protocol_development_19.png
A doc/manual/source/_static/images/protocol_development/protocol_development_20.png
A doc/manual/source/_static/images/protocol_development/protocol_development_21.png
A doc/manual/source/_static/images/protocol_development/protocol_development_22.png
A doc/manual/source/_static/images/protocol_development/protocol_development_23.png
A doc/manual/source/_static/images/protocol_development/protocol_development_24.png
A doc/manual/source/_static/images/protocol_development/protocol_development_25.png
A doc/manual/source/_static/images/protocol_development/protocol_development_26.png
A doc/manual/source/_static/images/protocol_development/protocol_development_27.png
A doc/manual/source/_static/images/protocol_development/protocol_development_28.png
A doc/manual/source/_static/images/protocol_development/protocol_development_29.png
A doc/manual/source/_static/images/protocol_development/protocol_development_30.png
A doc/manual/source/_static/images/protocol_development/protocol_development_31.png
A doc/manual/source/_static/images/protocol_development/protocol_development_32.png
A doc/manual/source/_static/images/protocol_development/protocol_development_33.png
A doc/manual/source/_static/images/pseudo-abde-1.png
A doc/manual/source/_static/images/pseudo-abde-2.png
A doc/manual/source/_static/images/pseudo-abde-3.png
A doc/manual/source/_static/images/pseudo-abde-4.png
A doc/manual/source/_static/images/pseudo3d_comb_rmv.png
A doc/manual/source/_static/images/pseudo3d_combine.png
A doc/manual/source/_static/images/register.png
A doc/manual/source/_static/images/register0.png
A doc/manual/source/_static/images/register1.png
A doc/manual/source/_static/images/register2.png
A doc/manual/source/_static/images/register3.png
A doc/manual/source/_static/images/register4.png
A doc/manual/source/_static/images/register5.png
A doc/manual/source/_static/images/report.png
A doc/manual/source/_static/images/reporter-cmenu.png
A doc/manual/source/_static/images/reporter-details.png
A doc/manual/source/_static/images/reporter-loadprof.png
A doc/manual/source/_static/images/reporter-save.png
A doc/manual/source/_static/images/reporter-saveprof.png
A doc/manual/source/_static/images/reporter-view.png
A doc/manual/source/_static/images/reporter-viewitem.png
A doc/manual/source/_static/images/reporter.png
A doc/manual/source/_static/images/residualplot.png
A doc/manual/source/_static/images/residuals.png
A doc/manual/source/_static/images/rmsd_query-c.png
A doc/manual/source/_static/images/rmsd_query-o.png
A doc/manual/source/_static/images/rotor-add.png
A doc/manual/source/_static/images/rotor-save-calibration.png
A doc/manual/source/_static/images/rotor.png
A doc/manual/source/_static/images/rotorstretch-0.png
A doc/manual/source/_static/images/rotorstretch-1.png
A doc/manual/source/_static/images/rotorstretch-2.png
A doc/manual/source/_static/images/rotorstretch-3.png
A doc/manual/source/_static/images/rotorstretch-4.png
A doc/manual/source/_static/images/rotorstretch-5.png
A doc/manual/source/_static/images/rotorstretch-6.png
A doc/manual/source/_static/images/rotorstretch-7.png
A doc/manual/source/_static/images/rotorstretch_report.png
A doc/manual/source/_static/images/run_details.png
A doc/manual/source/_static/images/s20W_bar.png
A doc/manual/source/_static/images/sassoc.png
A doc/manual/source/_static/images/save_colormap.png
A doc/manual/source/_static/images/second_moment.png
A doc/manual/source/_static/images/select_edits.png
A doc/manual/source/_static/images/select_runs.png
A doc/manual/source/_static/images/sequence.png
A doc/manual/source/_static/images/set-zvalue.png
A doc/manual/source/_static/images/simparams.png
A doc/manual/source/_static/images/simulatedReport.png
A doc/manual/source/_static/images/solution_edit.png
A doc/manual/source/_static/images/solution_new.png
A doc/manual/source/_static/images/solution_select.png
A doc/manual/source/_static/images/solution_settings.png
A doc/manual/source/_static/images/somo/somo_icon.png
A doc/manual/source/_static/images/spectrum_extinction.png
A doc/manual/source/_static/images/sw_spectrum.png
A doc/manual/source/_static/images/time_derivative.png
A doc/manual/source/_static/images/timestate-0.png
A doc/manual/source/_static/images/timestate-1.png
A doc/manual/source/_static/images/timestate-2.png
A doc/manual/source/_static/images/timestate-3.png
A doc/manual/source/_static/images/timestate-4.png
A doc/manual/source/_static/images/ultra.xpm
A doc/manual/source/_static/images/ultrascan3.png
A doc/manual/source/_static/images/upload_fit_spectrum.png
A doc/manual/source/_static/images/us_buffer.png
A doc/manual/source/_static/images/us_buffer_spect.png
A doc/manual/source/_static/images/us_buoyanc-2.png
A doc/manual/source/_static/images/us_buoyanc.png
A doc/manual/source/_static/images/us_conv-RA.png
A doc/manual/source/_static/images/us_convert/us_convert_01.png
A doc/manual/source/_static/images/us_convert/us_convert_02.png
A doc/manual/source/_static/images/us_convert/us_convert_03.png
A doc/manual/source/_static/images/us_convert/us_convert_04.png
A doc/manual/source/_static/images/us_convert/us_convert_05.png
A doc/manual/source/_static/images/us_convert/us_convert_06.png
A doc/manual/source/_static/images/us_convert/us_convert_07.png
A doc/manual/source/_static/images/us_convert/us_convert_08.png
A doc/manual/source/_static/images/us_convert/us_convert_09.png
A doc/manual/source/_static/images/us_convert/us_convert_10.png
A doc/manual/source/_static/images/us_convert/us_convert_11.png
A doc/manual/source/_static/images/us_convert/us_convert_12.png
A doc/manual/source/_static/images/us_convert/us_convert_13.png
A doc/manual/source/_static/images/us_convert/us_convert_14.png
A doc/manual/source/_static/images/us_convert_01.png
A doc/manual/source/_static/images/us_convert_02.png
A doc/manual/source/_static/images/us_convert_03.png
A doc/manual/source/_static/images/us_convert_04.png
A doc/manual/source/_static/images/us_convert_05.png
A doc/manual/source/_static/images/us_convert_06.png
A doc/manual/source/_static/images/us_convert_07.png
A doc/manual/source/_static/images/us_convert_08.png
A doc/manual/source/_static/images/us_convert_09.png
A doc/manual/source/_static/images/us_convert_10.png
A doc/manual/source/_static/images/us_convert_11.png
A doc/manual/source/_static/images/us_convert_12.png
A doc/manual/source/_static/images/us_convert_13.png
A doc/manual/source/_static/images/us_convert_14.png
A doc/manual/source/_static/images/us_convert_definedscans.png
A doc/manual/source/_static/images/us_convert_definesubset.png
A doc/manual/source/_static/images/us_edit.png
A doc/manual/source/_static/images/us_edit_mwl.png
A doc/manual/source/_static/images/us_equiltime.png
A doc/manual/source/_static/images/us_extinction-0.png
A doc/manual/source/_static/images/us_extinction-00.png
A doc/manual/source/_static/images/us_extinction-000.png
A doc/manual/source/_static/images/us_extinction-1.png
A doc/manual/source/_static/images/us_extinction-2.png
A doc/manual/source/_static/images/us_extinction-3.png
A doc/manual/source/_static/images/us_fds_filemanager-0.png
A doc/manual/source/_static/images/us_fds_filemanager-1.png
A doc/manual/source/_static/images/us_fds_filemanager-2.png
A doc/manual/source/_static/images/us_fds_filemanager-3.png
A doc/manual/source/_static/images/us_fds_filemanager-4.png
A doc/manual/source/_static/images/us_investigator-2.png
A doc/manual/source/_static/images/us_investigator.png
A doc/manual/source/_static/images/us_modelmetrics-0.png
A doc/manual/source/_static/images/us_modmet_report.png
A doc/manual/source/_static/images/us_project.png
A doc/manual/source/_static/images/us_project1.png
A doc/manual/source/_static/images/us_project2.png
A doc/manual/source/_static/images/us_project3.png
A doc/manual/source/_static/images/us_project_add-supdata.png
A doc/manual/source/_static/images/us_project_edit-supdata.png
A doc/manual/source/_static/images/us_project_web.png
A doc/manual/source/_static/images/us_project_webed.png
A doc/manual/source/_static/images/us_solution1.png
A doc/manual/source/_static/images/us_solution2.png
A doc/manual/source/_static/images/us_solution3.png
A doc/manual/source/_static/images/us_spectrum-0.png
A doc/manual/source/_static/images/us_spectrum-1.png
A doc/manual/source/_static/images/us_spectrum-load.png
A doc/manual/source/_static/images/usfont-1.png
A doc/manual/source/_static/images/usfont-2.png
A doc/manual/source/_static/images/vhw_combine-combo.png
A doc/manual/source/_static/images/vhw_combine-envel.png
A doc/manual/source/_static/images/vhw_combine-selrun.png
A doc/manual/source/_static/images/vhw_combine.png
A doc/manual/source/_static/images/vhw_distribution.png
A doc/manual/source/_static/images/vhw_enh_groups.png
A doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/_static/images/vhw_enh_groups_res.png
A doc/manual/source/_static/images/vhw_enhanced.png
A doc/manual/source/_static/images/vhw_histogram.png
A doc/manual/source/_static/images/xpn_report1.png
A doc/manual/source/_static/images/xpn_report2.png
A doc/manual/source/_static/images/xpn_viewer-loaded.png
A doc/manual/source/_static/images/xpn_viewer-saved.png
A doc/manual/source/_static/images/xpn_viewer.png
A doc/manual/source/_static/images/zvalue_eq.png
A doc/manual/source/_static/language_data.js
A doc/manual/source/_static/qthelp.css
A doc/manual/source/_static/sphinx_highlight.js
A doc/manual/source/analyte/analyte_edit.rst
A doc/manual/source/analyte/analyte_new.rst
A doc/manual/source/analyte/analyte_select.rst
A doc/manual/source/analyte/analyte_settings.rst
A doc/manual/source/analyte/index.rst
A doc/manual/source/associations.rst
A doc/manual/source/astfem_sim.rst
A doc/manual/source/auto_index.py
A doc/manual/source/beckman_openauc.rst
A doc/manual/source/buffer/buffer_edit.rst
A doc/manual/source/buffer/buffer_new.rst
A doc/manual/source/buffer/buffer_select.rst
A doc/manual/source/buffer/buffer_settings.rst
A doc/manual/source/buffer/index.rst
A doc/manual/source/buoyancy_editor.rst
A doc/manual/source/colorgradient.rst
A doc/manual/source/combine_models.rst
A doc/manual/source/common_dialogs.rst
A doc/manual/source/components.rst
M doc/manual/source/conf.py
A doc/manual/source/config.rst
A doc/manual/source/convert.rst
A doc/manual/source/ddist_combine.rst
A doc/manual/source/dens_match.rst
A doc/manual/source/dmga_init.rst
A doc/manual/source/dmga_init_constr.rst
A doc/manual/source/experiment/cells.rst
A doc/manual/source/experiment/general.rst
A doc/manual/source/experiment/import.rst
A doc/manual/source/experiment/index.rst
A doc/manual/source/experiment/liveupdate.rst
A doc/manual/source/experiment/optics.rst
A doc/manual/source/experiment/range.rst
A doc/manual/source/experiment/rotor.rst
A doc/manual/source/experiment/solutions.rst
A doc/manual/source/experiment/speeds.rst
A doc/manual/source/experiment/submit.rst
A doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_match_adv.rst
A doc/manual/source/fe_match/fe_match_main.rst
A doc/manual/source/fe_match/fe_match_simulate.rst
A doc/manual/source/fe_match/index.rst
A doc/manual/source/fit_meniscus.rst
A doc/manual/source/ga_initialize.rst
A doc/manual/source/gmp/gmp.rst
A doc/manual/source/gmp/gmp_audit_trail.rst
A doc/manual/source/gmp/gmp_automation.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
A doc/manual/source/gmp/gmp_data_acquisition/index.rst
A doc/manual/source/gmp/gmp_protocol_development.rst
A doc/manual/source/gmp/gmp_report_generator.rst
A doc/manual/source/gmp/gmp_signature.rst
A doc/manual/source/gmp/index.rst
A doc/manual/source/grid_editor.rst
A doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
A doc/manual/source/manage_data.rst
A doc/manual/source/model_editor.rst
A doc/manual/source/multi-wavelength/index.rst
A doc/manual/source/multi-wavelength/mwl_species_fit.rst
A doc/manual/source/multi-wavelength/mwl_species_sim.rst
A doc/manual/source/multi-wavelength/mwl_spectra.rst
A doc/manual/source/multi-wavelength/mwlr_viewer.rst
A doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/pcsa.rst
A doc/manual/source/pcsa/pcsa_adv.rst
A doc/manual/source/pcsa/pcsa_analys.rst
A doc/manual/source/pcsa/pcsa_mlines.rst
A doc/manual/source/pcsa/pcsa_results.rst
A doc/manual/source/pcsa/pcsa_rpscan.rst
A doc/manual/source/predict1.rst
A doc/manual/source/predict2.rst
A doc/manual/source/pseudo3d.rst
A doc/manual/source/register.rst
A doc/manual/source/reporter.rst
M doc/manual/source/requirements.txt
A doc/manual/source/rmsd_query.rst
A doc/manual/source/rotor.rst
A doc/manual/source/rotor_calibration.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page-abde.rst
A doc/manual/source/start_page-dm.rst
A doc/manual/source/start_page-int.rst
A doc/manual/source/start_page-mw.rst
A doc/manual/source/start_page-new.rst
A doc/manual/source/start_page-rpt.rst
A doc/manual/source/start_page.rst
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Merge pull request #402 from ehb54/lukas/manual
Add sphinx manual
Commit: dd51d90b60e4fd6785c98531588a585dc0fb34ed
https://github.com/ehb54/ultrascan3/commit/dd51d90b60e4fd6785c98531588a585dc0fb34ed
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/CMakeLists.txt
A doc/manual/source/2dsa/2dsa_adv.rst
A doc/manual/source/2dsa/2dsa_analys.rst
A doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/2dsa/index.rst
A doc/manual/source/3000_rpm.rst
A doc/manual/source/3d_plot.rst
R doc/manual/source/_static/css/custom.css
A doc/manual/source/_static/custom.css
A doc/manual/source/_static/images/2dsa_3dplot.png
A doc/manual/source/_static/images/2dsa_advan.png
A doc/manual/source/_static/images/2dsa_analvv.png
A doc/manual/source/_static/images/2dsa_analys.png
A doc/manual/source/_static/images/2dsa_main-c.png
A doc/manual/source/_static/images/2dsa_main-o.png
A doc/manual/source/_static/images/2dsa_resplot.png
A doc/manual/source/_static/images/D20W_bar.png
A doc/manual/source/_static/images/MW-bar.png
A doc/manual/source/_static/images/RINplot.png
A doc/manual/source/_static/images/TINplot.png
A doc/manual/source/_static/images/UltraScan-logo.png
A doc/manual/source/_static/images/abde-1.png
A doc/manual/source/_static/images/add_RIN-TIN.png
A doc/manual/source/_static/images/add_RIN.png
A doc/manual/source/_static/images/add_TIN.png
A doc/manual/source/_static/images/advanced_config.png
A doc/manual/source/_static/images/analyte_details.png
A doc/manual/source/_static/images/analyte_edit.png
A doc/manual/source/_static/images/analyte_edit_spec.png
A doc/manual/source/_static/images/analyte_new_sequence.png
A doc/manual/source/_static/images/analyte_newc.png
A doc/manual/source/_static/images/analyte_newd.png
A doc/manual/source/_static/images/analyte_newp.png
A doc/manual/source/_static/images/analyte_selectc.png
A doc/manual/source/_static/images/analyte_selectd.png
A doc/manual/source/_static/images/analyte_selectp.png
A doc/manual/source/_static/images/analyte_sequence.png
A doc/manual/source/_static/images/analyte_settings.png
A doc/manual/source/_static/images/analyte_spec-gui.png
A doc/manual/source/_static/images/analyte_specmenu.png
A doc/manual/source/_static/images/analyte_spectrum.png
A doc/manual/source/_static/images/analytes.png
A doc/manual/source/_static/images/associations.png
A doc/manual/source/_static/images/astfem_sim.png
A doc/manual/source/_static/images/bad_grid.png
A doc/manual/source/_static/images/beck_convert-2.png
A doc/manual/source/_static/images/beck_converter.png
A doc/manual/source/_static/images/bitmap.png
A doc/manual/source/_static/images/buffer_edit.png
A doc/manual/source/_static/images/buffer_edit_setting.png
A doc/manual/source/_static/images/buffer_edit_spectrum.png
A doc/manual/source/_static/images/buffer_info.png
A doc/manual/source/_static/images/buffer_manage_spectrum.png
A doc/manual/source/_static/images/buffer_new.png
A doc/manual/source/_static/images/buffer_new_spectrum.png
A doc/manual/source/_static/images/buffer_select.png
A doc/manual/source/_static/images/buffer_settings.png
A doc/manual/source/_static/images/buffer_spectrum.png
A doc/manual/source/_static/images/cfa_view-loadauc.png
A doc/manual/source/_static/images/cfa_view-loadraw.png
A doc/manual/source/_static/images/cfa_view-main.png
A doc/manual/source/_static/images/cfa_view-statsauc.png
A doc/manual/source/_static/images/cfa_view-statsraw.png
A doc/manual/source/_static/images/color-1.png
A doc/manual/source/_static/images/color-2.png
A doc/manual/source/_static/images/color-a.png
A doc/manual/source/_static/images/color-b.png
A doc/manual/source/_static/images/colorgrad1.png
A doc/manual/source/_static/images/colorgradient/col1_colgen.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/_static/images/colorgradient/col2_colgen.png
A doc/manual/source/_static/images/colorgradient/colorgrad.png
A doc/manual/source/_static/images/colorgradient/colorgradient_main.png
A doc/manual/source/_static/images/colorgradient/components.png
A doc/manual/source/_static/images/colorgradient/model_editor.png
A doc/manual/source/_static/images/combine_models-idedit.png
A doc/manual/source/_static/images/combine_models-save.png
A doc/manual/source/_static/images/combine_models.png
A doc/manual/source/_static/images/components.png
A doc/manual/source/_static/images/config.png
A doc/manual/source/_static/images/config1.png
A doc/manual/source/_static/images/config2.png
A doc/manual/source/_static/images/config_plot.png
A doc/manual/source/_static/images/convert-RIdata.png
A doc/manual/source/_static/images/convert-exclude.png
A doc/manual/source/_static/images/convert-experiment.png
A doc/manual/source/_static/images/convert-mwl.png
A doc/manual/source/_static/images/convert-seltrip.png
A doc/manual/source/_static/images/convert-subset.png
A doc/manual/source/_static/images/convert-tolerance.png
A doc/manual/source/_static/images/convert.png
A doc/manual/source/_static/images/custom_grid-1.png
A doc/manual/source/_static/images/custom_grid.png
A doc/manual/source/_static/images/data_converter.png
A doc/manual/source/_static/images/data_loader-edits.png
A doc/manual/source/_static/images/data_loader-trips.png
A doc/manual/source/_static/images/data_loader.png
A doc/manual/source/_static/images/database.png
A doc/manual/source/_static/images/ddist_combine-selrun.png
A doc/manual/source/_static/images/ddist_combine.png
A doc/manual/source/_static/images/densmatch_main.png
A doc/manual/source/_static/images/densmatch_mpars_completed.png
A doc/manual/source/_static/images/densmatch_mpars_empty.png
A doc/manual/source/_static/images/densmatch_rmvmodels.png
A doc/manual/source/_static/images/edit_buffer_spec_menu.png
A doc/manual/source/_static/images/eq1-mean.png
A doc/manual/source/_static/images/eq2-skew.png
A doc/manual/source/_static/images/eq3-kurtosis.png
A doc/manual/source/_static/images/eq4-moments.png
A doc/manual/source/_static/images/eq5-variance.png
A doc/manual/source/_static/images/eq6-stddev.png
A doc/manual/source/_static/images/eq7-probsigma.png
A doc/manual/source/_static/images/eq8-confidence.png
A doc/manual/source/_static/images/experiment_cells.png
A doc/manual/source/_static/images/experiment_edit.png
A doc/manual/source/_static/images/experiment_general.png
A doc/manual/source/_static/images/experiment_import.png
A doc/manual/source/_static/images/experiment_liveupdate.png
A doc/manual/source/_static/images/experiment_liveupdate_run.png
A doc/manual/source/_static/images/experiment_optics.png
A doc/manual/source/_static/images/experiment_overview.png
A doc/manual/source/_static/images/experiment_photomult.png
A doc/manual/source/_static/images/experiment_range.png
A doc/manual/source/_static/images/experiment_range_details.png
A doc/manual/source/_static/images/experiment_range_selector.png
A doc/manual/source/_static/images/experiment_range_selmanual.png
A doc/manual/source/_static/images/experiment_rotor.png
A doc/manual/source/_static/images/experiment_solutions.png
A doc/manual/source/_static/images/experiment_solutions_comments.png
A doc/manual/source/_static/images/experiment_speeds.png
A doc/manual/source/_static/images/experiment_submit.png
A doc/manual/source/_static/images/experiment_submit_details.png
A doc/manual/source/_static/images/experiment_upload.png
A doc/manual/source/_static/images/export_leg_1.png
A doc/manual/source/_static/images/export_leg_RA.png
A doc/manual/source/_static/images/export_leg_RI.png
A doc/manual/source/_static/images/export_leg_auc.png
A doc/manual/source/_static/images/export_leg_beck.png
A doc/manual/source/_static/images/export_legacy.png
A doc/manual/source/_static/images/fe_load_data.png
A doc/manual/source/_static/images/fe_load_model_distrib.png
A doc/manual/source/_static/images/fe_match.png
A doc/manual/source/_static/images/fe_match_3dplot.png
A doc/manual/source/_static/images/fe_match_adv.png
A doc/manual/source/_static/images/fe_match_all.png
A doc/manual/source/_static/images/fe_match_allct.png
A doc/manual/source/_static/images/fe_match_lddat1.png
A doc/manual/source/_static/images/fe_match_lddat2.png
A doc/manual/source/_static/images/fe_match_lddat3.png
A doc/manual/source/_static/images/fe_match_lddat4.png
A doc/manual/source/_static/images/fe_match_ra.png
A doc/manual/source/_static/images/fe_match_resplot.png
A doc/manual/source/_static/images/fe_match_sim1.png
A doc/manual/source/_static/images/fe_match_sim2.png
A doc/manual/source/_static/images/fe_match_sim3_1b.png
A doc/manual/source/_static/images/fe_match_sim3_1p.png
A doc/manual/source/_static/images/fe_match_sim3_2b.png
A doc/manual/source/_static/images/fe_match_sim3_2p.png
A doc/manual/source/_static/images/fe_match_sim3_3b.png
A doc/manual/source/_static/images/fe_match_sim3_4b.png
A doc/manual/source/_static/images/fe_match_sim3_5b.png
A doc/manual/source/_static/images/fe_match_sim3_5p.png
A doc/manual/source/_static/images/fe_match_sim3_6b.png
A doc/manual/source/_static/images/fe_match_sim3_7b.png
A doc/manual/source/_static/images/fe_match_sim3_8b.png
A doc/manual/source/_static/images/fe_match_sim4.png
A doc/manual/source/_static/images/fe_match_sim5.png
A doc/manual/source/_static/images/fe_match_sim6.png
A doc/manual/source/_static/images/fe_match_sim7.png
A doc/manual/source/_static/images/fe_match_simulated.png
A doc/manual/source/_static/images/fe_match_viewer.png
A doc/manual/source/_static/images/fe_sim-1.png
A doc/manual/source/_static/images/fe_sim-2.png
A doc/manual/source/_static/images/fit_men-editupd.png
A doc/manual/source/_static/images/fit_men-load.png
A doc/manual/source/_static/images/fit_men_bot.png
A doc/manual/source/_static/images/fit_meniscus.png
A doc/manual/source/_static/images/ga_initialize-o.png
A doc/manual/source/_static/images/ga_initialize-p.png
A doc/manual/source/_static/images/ga_initialize.png
A doc/manual/source/_static/images/ga_report-1.png
A doc/manual/source/_static/images/ga_report-2.png
A doc/manual/source/_static/images/ga_report-3.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/_static/images/gmp/automation/2dsa.png
A doc/manual/source/_static/images/gmp/automation/2dsa_it.png
A doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
A doc/manual/source/_static/images/gmp/automation/Aprofile.png
A doc/manual/source/_static/images/gmp/automation/analysis.png
A doc/manual/source/_static/images/gmp/automation/auto_edit.png
A doc/manual/source/_static/images/gmp/automation/bitmap.png
A doc/manual/source/_static/images/gmp/automation/cells.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/_static/images/gmp/automation/lims.png
A doc/manual/source/_static/images/gmp/automation/main_window.png
A doc/manual/source/_static/images/gmp/automation/man_edit.png
A doc/manual/source/_static/images/gmp/automation/optics.png
A doc/manual/source/_static/images/gmp/automation/pcsa.png
A doc/manual/source/_static/images/gmp/automation/pcsa_report.png
A doc/manual/source/_static/images/gmp/automation/plot.png
A doc/manual/source/_static/images/gmp/automation/ranges.png
A doc/manual/source/_static/images/gmp/automation/report_editor.png
A doc/manual/source/_static/images/gmp/automation/rotor.png
A doc/manual/source/_static/images/gmp/automation/solutions.png
A doc/manual/source/_static/images/gmp/automation/speed.png
A doc/manual/source/_static/images/gmp/automation/submit.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/_static/images/gmp/gmp.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/_static/images/gmp/vhw_distribution.png
A doc/manual/source/_static/images/good_grid.png
A doc/manual/source/_static/images/grid-setup.png
A doc/manual/source/_static/images/grid_editor.png
A doc/manual/source/_static/images/grid_editor_multi_grids.png
A doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
A doc/manual/source/_static/images/grid_editor_mw_view.png
A doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid1-good.png
A doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid2-good.png
A doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid3-good.png
A doc/manual/source/_static/images/hori_cs.png
A doc/manual/source/_static/images/idist_comb_selPre.png
A doc/manual/source/_static/images/idist_comb_seldis.png
A doc/manual/source/_static/images/idist_combine.png
A doc/manual/source/_static/images/import_drop-triple.png
A doc/manual/source/_static/images/incr_sigmoid.png
A doc/manual/source/_static/images/load_auc-search.png
A doc/manual/source/_static/images/load_auc-trips.png
A doc/manual/source/_static/images/load_auc.png
A doc/manual/source/_static/images/load_colormap.png
A doc/manual/source/_static/images/load_model_dis-MID.png
A doc/manual/source/_static/images/load_model_distrib.png
A doc/manual/source/_static/images/load_noise.png
A doc/manual/source/_static/images/load_noise_details.png
A doc/manual/source/_static/images/loaded_mwl-specfit.png
A doc/manual/source/_static/images/manage_data.png
A doc/manual/source/_static/images/manage_data_bhide.png
A doc/manual/source/_static/images/manage_data_bshow.png
A doc/manual/source/_static/images/manage_data_cmenu-1.png
A doc/manual/source/_static/images/manage_data_cmenu-2.png
A doc/manual/source/_static/images/manage_data_conf.png
A doc/manual/source/_static/images/manage_data_exp.png
A doc/manual/source/_static/images/manage_data_pasw.png
A doc/manual/source/_static/images/manage_data_sync.png
A doc/manual/source/_static/images/manage_data_thelp-1.png
A doc/manual/source/_static/images/manage_data_thelp-2.png
A doc/manual/source/_static/images/master-pw.png
A doc/manual/source/_static/images/model_editor.png
A doc/manual/source/_static/images/mwl-spe-fit-saved.png
A doc/manual/source/_static/images/mwl-spe-fitted.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res.png
A doc/manual/source/_static/images/mwl-spe_spec-decom.png
A doc/manual/source/_static/images/mwl-spec-fit-report.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-1.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-2.png
A doc/manual/source/_static/images/mwl-species-fit.png
A doc/manual/source/_static/images/mwl_species_sim.png
A doc/manual/source/_static/images/mwl_species_simed.png
A doc/manual/source/_static/images/mwlr_spectra_3d.png
A doc/manual/source/_static/images/mwlr_spectra_cont.png
A doc/manual/source/_static/images/mwlr_spectra_f.png
A doc/manual/source/_static/images/mwlr_spectra_o.png
A doc/manual/source/_static/images/mwlr_spectra_save.png
A doc/manual/source/_static/images/mwlr_view_3dplot.png
A doc/manual/source/_static/images/mwlr_view_load.png
A doc/manual/source/_static/images/mwlr_view_pltctrl.png
A doc/manual/source/_static/images/mwlr_viewer.png
A doc/manual/source/_static/images/mwlr_viewer_3d.png
A doc/manual/source/_static/images/mwlr_viewer_ctl.png
A doc/manual/source/_static/images/mwlr_viewer_wvl.png
A doc/manual/source/_static/images/mwlr_viewer_xwavl.png
A doc/manual/source/_static/images/noise_prompt.png
A doc/manual/source/_static/images/noise_vec_db.png
A doc/manual/source/_static/images/norm_gridplot.png
A doc/manual/source/_static/images/optima_config_new.png
A doc/manual/source/_static/images/optima_host_config.png
A doc/manual/source/_static/images/pcsa.png
A doc/manual/source/_static/images/pcsa_3dplot.png
A doc/manual/source/_static/images/pcsa_adv_control.png
A doc/manual/source/_static/images/pcsa_all.png
A doc/manual/source/_static/images/pcsa_analys-line.png
A doc/manual/source/_static/images/pcsa_analys-sigm.png
A doc/manual/source/_static/images/pcsa_bitmap.png
A doc/manual/source/_static/images/pcsa_controls_simulated.png
A doc/manual/source/_static/images/pcsa_main-c.png
A doc/manual/source/_static/images/pcsa_mline_sigm.png
A doc/manual/source/_static/images/pcsa_mline_str.png
A doc/manual/source/_static/images/pcsa_mline_unsim.png
A doc/manual/source/_static/images/pcsa_mlines-line1.png
A doc/manual/source/_static/images/pcsa_mlines-line2.png
A doc/manual/source/_static/images/pcsa_mlines-sigm1.png
A doc/manual/source/_static/images/pcsa_mlines-sigm2.png
A doc/manual/source/_static/images/pcsa_regul.png
A doc/manual/source/_static/images/pcsa_regul_sim.png
A doc/manual/source/_static/images/pcsa_report.png
A doc/manual/source/_static/images/pcsa_res_viewer.png
A doc/manual/source/_static/images/pcsa_resplot.png
A doc/manual/source/_static/images/pcsa_rpscan-auto.png
A doc/manual/source/_static/images/pcsa_rpscan-select.png
A doc/manual/source/_static/images/pcsa_rpscan.png
A doc/manual/source/_static/images/pcsa_rpscan_sim.png
A doc/manual/source/_static/images/pcsa_sigmoid_eq.png
A doc/manual/source/_static/images/pcsa_simulated.png
A doc/manual/source/_static/images/pline_dsig.png
A doc/manual/source/_static/images/pline_power.png
A doc/manual/source/_static/images/pline_stline.png
A doc/manual/source/_static/images/plot_controls.png
A doc/manual/source/_static/images/predict1.png
A doc/manual/source/_static/images/predict2-1.png
A doc/manual/source/_static/images/predict2.png
A doc/manual/source/_static/images/print.png
A doc/manual/source/_static/images/process_crash.png
A doc/manual/source/_static/images/process_crash2.png
A doc/manual/source/_static/images/protocol_development/protocol_development_01.png
A doc/manual/source/_static/images/protocol_development/protocol_development_02.png
A doc/manual/source/_static/images/protocol_development/protocol_development_03.png
A doc/manual/source/_static/images/protocol_development/protocol_development_04.png
A doc/manual/source/_static/images/protocol_development/protocol_development_05.png
A doc/manual/source/_static/images/protocol_development/protocol_development_06.png
A doc/manual/source/_static/images/protocol_development/protocol_development_07.png
A doc/manual/source/_static/images/protocol_development/protocol_development_08.png
A doc/manual/source/_static/images/protocol_development/protocol_development_09.png
A doc/manual/source/_static/images/protocol_development/protocol_development_10.png
A doc/manual/source/_static/images/protocol_development/protocol_development_11.png
A doc/manual/source/_static/images/protocol_development/protocol_development_12.png
A doc/manual/source/_static/images/protocol_development/protocol_development_13.png
A doc/manual/source/_static/images/protocol_development/protocol_development_14.png
A doc/manual/source/_static/images/protocol_development/protocol_development_15.png
A doc/manual/source/_static/images/protocol_development/protocol_development_16.png
A doc/manual/source/_static/images/protocol_development/protocol_development_17.png
A doc/manual/source/_static/images/protocol_development/protocol_development_18.png
A doc/manual/source/_static/images/protocol_development/protocol_development_19.png
A doc/manual/source/_static/images/protocol_development/protocol_development_20.png
A doc/manual/source/_static/images/protocol_development/protocol_development_21.png
A doc/manual/source/_static/images/protocol_development/protocol_development_22.png
A doc/manual/source/_static/images/protocol_development/protocol_development_23.png
A doc/manual/source/_static/images/protocol_development/protocol_development_24.png
A doc/manual/source/_static/images/protocol_development/protocol_development_25.png
A doc/manual/source/_static/images/protocol_development/protocol_development_26.png
A doc/manual/source/_static/images/protocol_development/protocol_development_27.png
A doc/manual/source/_static/images/protocol_development/protocol_development_28.png
A doc/manual/source/_static/images/protocol_development/protocol_development_29.png
A doc/manual/source/_static/images/protocol_development/protocol_development_30.png
A doc/manual/source/_static/images/protocol_development/protocol_development_31.png
A doc/manual/source/_static/images/protocol_development/protocol_development_32.png
A doc/manual/source/_static/images/protocol_development/protocol_development_33.png
A doc/manual/source/_static/images/pseudo-abde-1.png
A doc/manual/source/_static/images/pseudo-abde-2.png
A doc/manual/source/_static/images/pseudo-abde-3.png
A doc/manual/source/_static/images/pseudo-abde-4.png
A doc/manual/source/_static/images/pseudo3d_comb_rmv.png
A doc/manual/source/_static/images/pseudo3d_combine.png
A doc/manual/source/_static/images/register.png
A doc/manual/source/_static/images/register0.png
A doc/manual/source/_static/images/register1.png
A doc/manual/source/_static/images/register2.png
A doc/manual/source/_static/images/register3.png
A doc/manual/source/_static/images/register4.png
A doc/manual/source/_static/images/register5.png
A doc/manual/source/_static/images/report.png
A doc/manual/source/_static/images/reporter-cmenu.png
A doc/manual/source/_static/images/reporter-details.png
A doc/manual/source/_static/images/reporter-loadprof.png
A doc/manual/source/_static/images/reporter-save.png
A doc/manual/source/_static/images/reporter-saveprof.png
A doc/manual/source/_static/images/reporter-view.png
A doc/manual/source/_static/images/reporter-viewitem.png
A doc/manual/source/_static/images/reporter.png
A doc/manual/source/_static/images/residualplot.png
A doc/manual/source/_static/images/residuals.png
A doc/manual/source/_static/images/rmsd_query-c.png
A doc/manual/source/_static/images/rmsd_query-o.png
A doc/manual/source/_static/images/rotor-add.png
A doc/manual/source/_static/images/rotor-save-calibration.png
A doc/manual/source/_static/images/rotor.png
A doc/manual/source/_static/images/rotorstretch-0.png
A doc/manual/source/_static/images/rotorstretch-1.png
A doc/manual/source/_static/images/rotorstretch-2.png
A doc/manual/source/_static/images/rotorstretch-3.png
A doc/manual/source/_static/images/rotorstretch-4.png
A doc/manual/source/_static/images/rotorstretch-5.png
A doc/manual/source/_static/images/rotorstretch-6.png
A doc/manual/source/_static/images/rotorstretch-7.png
A doc/manual/source/_static/images/rotorstretch_report.png
A doc/manual/source/_static/images/run_details.png
A doc/manual/source/_static/images/s20W_bar.png
A doc/manual/source/_static/images/sassoc.png
A doc/manual/source/_static/images/save_colormap.png
A doc/manual/source/_static/images/second_moment.png
A doc/manual/source/_static/images/select_edits.png
A doc/manual/source/_static/images/select_runs.png
A doc/manual/source/_static/images/sequence.png
A doc/manual/source/_static/images/set-zvalue.png
A doc/manual/source/_static/images/simparams.png
A doc/manual/source/_static/images/simulatedReport.png
A doc/manual/source/_static/images/solution_edit.png
A doc/manual/source/_static/images/solution_new.png
A doc/manual/source/_static/images/solution_select.png
A doc/manual/source/_static/images/solution_settings.png
A doc/manual/source/_static/images/somo/somo_icon.png
A doc/manual/source/_static/images/spectrum_extinction.png
A doc/manual/source/_static/images/sw_spectrum.png
A doc/manual/source/_static/images/time_derivative.png
A doc/manual/source/_static/images/timestate-0.png
A doc/manual/source/_static/images/timestate-1.png
A doc/manual/source/_static/images/timestate-2.png
A doc/manual/source/_static/images/timestate-3.png
A doc/manual/source/_static/images/timestate-4.png
A doc/manual/source/_static/images/ultra.xpm
A doc/manual/source/_static/images/ultrascan3.png
A doc/manual/source/_static/images/upload_fit_spectrum.png
A doc/manual/source/_static/images/us_buffer.png
A doc/manual/source/_static/images/us_buffer_spect.png
A doc/manual/source/_static/images/us_buoyanc-2.png
A doc/manual/source/_static/images/us_buoyanc.png
A doc/manual/source/_static/images/us_conv-RA.png
A doc/manual/source/_static/images/us_convert/us_convert_01.png
A doc/manual/source/_static/images/us_convert/us_convert_02.png
A doc/manual/source/_static/images/us_convert/us_convert_03.png
A doc/manual/source/_static/images/us_convert/us_convert_04.png
A doc/manual/source/_static/images/us_convert/us_convert_05.png
A doc/manual/source/_static/images/us_convert/us_convert_06.png
A doc/manual/source/_static/images/us_convert/us_convert_07.png
A doc/manual/source/_static/images/us_convert/us_convert_08.png
A doc/manual/source/_static/images/us_convert/us_convert_09.png
A doc/manual/source/_static/images/us_convert/us_convert_10.png
A doc/manual/source/_static/images/us_convert/us_convert_11.png
A doc/manual/source/_static/images/us_convert/us_convert_12.png
A doc/manual/source/_static/images/us_convert/us_convert_13.png
A doc/manual/source/_static/images/us_convert/us_convert_14.png
A doc/manual/source/_static/images/us_convert_01.png
A doc/manual/source/_static/images/us_convert_02.png
A doc/manual/source/_static/images/us_convert_03.png
A doc/manual/source/_static/images/us_convert_04.png
A doc/manual/source/_static/images/us_convert_05.png
A doc/manual/source/_static/images/us_convert_06.png
A doc/manual/source/_static/images/us_convert_07.png
A doc/manual/source/_static/images/us_convert_08.png
A doc/manual/source/_static/images/us_convert_09.png
A doc/manual/source/_static/images/us_convert_10.png
A doc/manual/source/_static/images/us_convert_11.png
A doc/manual/source/_static/images/us_convert_12.png
A doc/manual/source/_static/images/us_convert_13.png
A doc/manual/source/_static/images/us_convert_14.png
A doc/manual/source/_static/images/us_convert_definedscans.png
A doc/manual/source/_static/images/us_convert_definesubset.png
A doc/manual/source/_static/images/us_edit.png
A doc/manual/source/_static/images/us_edit_mwl.png
A doc/manual/source/_static/images/us_equiltime.png
A doc/manual/source/_static/images/us_extinction-0.png
A doc/manual/source/_static/images/us_extinction-00.png
A doc/manual/source/_static/images/us_extinction-000.png
A doc/manual/source/_static/images/us_extinction-1.png
A doc/manual/source/_static/images/us_extinction-2.png
A doc/manual/source/_static/images/us_extinction-3.png
A doc/manual/source/_static/images/us_fds_filemanager-0.png
A doc/manual/source/_static/images/us_fds_filemanager-1.png
A doc/manual/source/_static/images/us_fds_filemanager-2.png
A doc/manual/source/_static/images/us_fds_filemanager-3.png
A doc/manual/source/_static/images/us_fds_filemanager-4.png
A doc/manual/source/_static/images/us_investigator-2.png
A doc/manual/source/_static/images/us_investigator.png
A doc/manual/source/_static/images/us_modelmetrics-0.png
A doc/manual/source/_static/images/us_modmet_report.png
A doc/manual/source/_static/images/us_project.png
A doc/manual/source/_static/images/us_project1.png
A doc/manual/source/_static/images/us_project2.png
A doc/manual/source/_static/images/us_project3.png
A doc/manual/source/_static/images/us_project_add-supdata.png
A doc/manual/source/_static/images/us_project_edit-supdata.png
A doc/manual/source/_static/images/us_project_web.png
A doc/manual/source/_static/images/us_project_webed.png
A doc/manual/source/_static/images/us_solution1.png
A doc/manual/source/_static/images/us_solution2.png
A doc/manual/source/_static/images/us_solution3.png
A doc/manual/source/_static/images/us_spectrum-0.png
A doc/manual/source/_static/images/us_spectrum-1.png
A doc/manual/source/_static/images/us_spectrum-load.png
A doc/manual/source/_static/images/usfont-1.png
A doc/manual/source/_static/images/usfont-2.png
A doc/manual/source/_static/images/vhw_combine-combo.png
A doc/manual/source/_static/images/vhw_combine-envel.png
A doc/manual/source/_static/images/vhw_combine-selrun.png
A doc/manual/source/_static/images/vhw_combine.png
A doc/manual/source/_static/images/vhw_distribution.png
A doc/manual/source/_static/images/vhw_enh_groups.png
A doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/_static/images/vhw_enh_groups_res.png
A doc/manual/source/_static/images/vhw_enhanced.png
A doc/manual/source/_static/images/vhw_histogram.png
A doc/manual/source/_static/images/xpn_report1.png
A doc/manual/source/_static/images/xpn_report2.png
A doc/manual/source/_static/images/xpn_viewer-loaded.png
A doc/manual/source/_static/images/xpn_viewer-saved.png
A doc/manual/source/_static/images/xpn_viewer.png
A doc/manual/source/_static/images/zvalue_eq.png
A doc/manual/source/_static/language_data.js
A doc/manual/source/_static/qthelp.css
A doc/manual/source/_static/sphinx_highlight.js
A doc/manual/source/analyte/analyte_edit.rst
A doc/manual/source/analyte/analyte_new.rst
A doc/manual/source/analyte/analyte_select.rst
A doc/manual/source/analyte/analyte_settings.rst
A doc/manual/source/analyte/index.rst
A doc/manual/source/associations.rst
A doc/manual/source/astfem_sim.rst
A doc/manual/source/auto_index.py
A doc/manual/source/beckman_openauc.rst
A doc/manual/source/buffer/buffer_edit.rst
A doc/manual/source/buffer/buffer_new.rst
A doc/manual/source/buffer/buffer_select.rst
A doc/manual/source/buffer/buffer_settings.rst
A doc/manual/source/buffer/index.rst
A doc/manual/source/buoyancy_editor.rst
A doc/manual/source/colorgradient.rst
A doc/manual/source/combine_models.rst
A doc/manual/source/common_dialogs.rst
A doc/manual/source/components.rst
M doc/manual/source/conf.py
A doc/manual/source/config.rst
A doc/manual/source/convert.rst
A doc/manual/source/ddist_combine.rst
A doc/manual/source/dens_match.rst
A doc/manual/source/dmga_init.rst
A doc/manual/source/dmga_init_constr.rst
A doc/manual/source/experiment/cells.rst
A doc/manual/source/experiment/general.rst
A doc/manual/source/experiment/import.rst
A doc/manual/source/experiment/index.rst
A doc/manual/source/experiment/liveupdate.rst
A doc/manual/source/experiment/optics.rst
A doc/manual/source/experiment/range.rst
A doc/manual/source/experiment/rotor.rst
A doc/manual/source/experiment/solutions.rst
A doc/manual/source/experiment/speeds.rst
A doc/manual/source/experiment/submit.rst
A doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_match_adv.rst
A doc/manual/source/fe_match/fe_match_main.rst
A doc/manual/source/fe_match/fe_match_simulate.rst
A doc/manual/source/fe_match/index.rst
A doc/manual/source/fit_meniscus.rst
A doc/manual/source/ga_initialize.rst
A doc/manual/source/gmp/gmp.rst
A doc/manual/source/gmp/gmp_audit_trail.rst
A doc/manual/source/gmp/gmp_automation.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
A doc/manual/source/gmp/gmp_data_acquisition/index.rst
A doc/manual/source/gmp/gmp_protocol_development.rst
A doc/manual/source/gmp/gmp_report_generator.rst
A doc/manual/source/gmp/gmp_signature.rst
A doc/manual/source/gmp/index.rst
A doc/manual/source/grid_editor.rst
A doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
A doc/manual/source/manage_data.rst
A doc/manual/source/model_editor.rst
A doc/manual/source/multi-wavelength/index.rst
A doc/manual/source/multi-wavelength/mwl_species_fit.rst
A doc/manual/source/multi-wavelength/mwl_species_sim.rst
A doc/manual/source/multi-wavelength/mwl_spectra.rst
A doc/manual/source/multi-wavelength/mwlr_viewer.rst
A doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/pcsa.rst
A doc/manual/source/pcsa/pcsa_adv.rst
A doc/manual/source/pcsa/pcsa_analys.rst
A doc/manual/source/pcsa/pcsa_mlines.rst
A doc/manual/source/pcsa/pcsa_results.rst
A doc/manual/source/pcsa/pcsa_rpscan.rst
A doc/manual/source/predict1.rst
A doc/manual/source/predict2.rst
A doc/manual/source/pseudo3d.rst
A doc/manual/source/register.rst
A doc/manual/source/reporter.rst
M doc/manual/source/requirements.txt
A doc/manual/source/rmsd_query.rst
A doc/manual/source/rotor.rst
A doc/manual/source/rotor_calibration.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page-abde.rst
A doc/manual/source/start_page-dm.rst
A doc/manual/source/start_page-int.rst
A doc/manual/source/start_page-mw.rst
A doc/manual/source/start_page-new.rst
A doc/manual/source/start_page-rpt.rst
A doc/manual/source/start_page.rst
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Merge pull request #404 from ehb54/main
update demeler-doc1 to main
Commit: cd2bc2e7c99e075b63a282c8e687e6d0e111670d
https://github.com/ehb54/ultrascan3/commit/cd2bc2e7c99e075b63a282c8e687e6d0e111670d
Author: Demeler <demeler at uslims.uleth.ca>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/fit_meniscus.rst
Log Message:
-----------
Modify capitalization in fit meniscus
Commit: cc049b493eb8cb3409dd4d22051e345fd80c7982
https://github.com/ehb54/ultrascan3/commit/cc049b493eb8cb3409dd4d22051e345fd80c7982
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2026-04-04 (Sat, 04 Apr 2026)
Changed paths:
M doc/manual/source/fit_meniscus.rst
Log Message:
-----------
Merge pull request #405 from ehb54/demeler-doc1
Demeler doc1
Commit: 11572ca66d369080b73f5925c9b46c3b7200c538
https://github.com/ehb54/ultrascan3/commit/11572ca66d369080b73f5925c9b46c3b7200c538
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/source/index.rst
Log Message:
-----------
Update Sphinx build system: include `auto_index.py`, link PDF manual in HTML, and clean PDF on `make clean`.
Commit: e2fbf48c659f3fad2922c9067a43f1b3bdc0ec5e
https://github.com/ehb54/ultrascan3/commit/e2fbf48c659f3fad2922c9067a43f1b3bdc0ec5e
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update LaTeX configuration: set `latex_use_xindy` to False and redefine font settings for better Unicode handling and compatibility.
Commit: 78d927e26195be17b4a8ff09959676a6247bcb34
https://github.com/ehb54/ultrascan3/commit/78d927e26195be17b4a8ff09959676a6247bcb34
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Ensure zoom stack initialization on zoom button press
Commit: dcc8ccbdac5394275563aeee0c8c523a6df45589
https://github.com/ehb54/ultrascan3/commit/dcc8ccbdac5394275563aeee0c8c523a6df45589
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-06 (Mon, 06 Apr 2026)
Changed paths:
M gui/us_plot.cpp
Log Message:
-----------
Refactor zoom logic to handle null plots and absolute values
Commit: f7169d62eaece4fd69dd8f88ab06432a8bb390f0
https://github.com/ehb54/ultrascan3/commit/f7169d62eaece4fd69dd8f88ab06432a8bb390f0
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
A test/utils/test_us_help_pages.cpp
Log Message:
-----------
Add unit test for validating existence of help pages and refactor zoom stack initialization for improved consistency.
Commit: a542b58b077c8629e05993705eb0967c8e2ed720
https://github.com/ehb54/ultrascan3/commit/a542b58b077c8629e05993705eb0967c8e2ed720
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .gitignore
Log Message:
-----------
Update .gitignore to exclude `doc/manual/build`
Commit: 3841b3da9b269c931e61bd8332217ea7edafa5ce
https://github.com/ehb54/ultrascan3/commit/3841b3da9b269c931e61bd8332217ea7edafa5ce
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M utils/CMakeLists.txt
M utils/us_extern.h
Log Message:
-----------
Add static library support: define `US_UTIL_STATIC` and conditionally update `us_extern.h`.
Commit: 8bd5bb513393dabe50c036ffbfe60f96a6b3ca21
https://github.com/ehb54/ultrascan3/commit/8bd5bb513393dabe50c036ffbfe60f96a6b3ca21
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M utils/us_buffer.h
Log Message:
-----------
Initialize `grad_form` flag to `false` in `us_buffer.h`.
Commit: 923260944deb1b79e310ceb98a16effa5b5090ca
https://github.com/ehb54/ultrascan3/commit/923260944deb1b79e310ceb98a16effa5b5090ca
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.h
M gui/us_buffer_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_get_run.h
M gui/us_load_auc.h
M gui/us_model_loader.h
M gui/us_select_triples.h
M gui/us_solution_gui.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
Log Message:
-----------
Update help file paths for improved documentation consistency and organization.
Commit: 78e6d90c9756f558dd3c67e03ec447dbaa996a8a
https://github.com/ehb54/ultrascan3/commit/78e6d90c9756f558dd3c67e03ec447dbaa996a8a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/doc-build.yml
Log Message:
-----------
Let github action only build the documnetaion with the qthelp builder, because latex dependencies are currently missing
Commit: 05eb1370b6158124bcafd398fef77466e66be0aa
https://github.com/ehb54/ultrascan3/commit/05eb1370b6158124bcafd398fef77466e66be0aa
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Remove feature commit in wrong branch
Commit: 18c02644a764f585fd585e1af1c21e4d5790b60c
https://github.com/ehb54/ultrascan3/commit/18c02644a764f585fd585e1af1c21e4d5790b60c
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Merge pull request #406 from ehb54/lukas/us_plot_zoom_qwt616
Ensure zoom stack initialization on zoom button press
Commit: 3c1312a39ac562248315fb410c301c9d8eab79f5
https://github.com/ehb54/ultrascan3/commit/3c1312a39ac562248315fb410c301c9d8eab79f5
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M gui/us_plot.h
Log Message:
-----------
Merge branch 'main' into lukas/manual_test/make
Commit: 99fc3a66c861b6275cedd397bfd03e34e85d9435
https://github.com/ehb54/ultrascan3/commit/99fc3a66c861b6275cedd397bfd03e34e85d9435
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Add GitHub Actions workflow for Sphinx documentation build
Commit: 5fa677c2afd3175fa29a37165561f4125a867c5d
https://github.com/ehb54/ultrascan3/commit/5fa677c2afd3175fa29a37165561f4125a867c5d
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Refactor Sphinx GitHub Actions workflow: replace deprecated problem matcher usage, streamline build commands, and add error handling.
Commit: b91a5ae2fecdc63970efdf031426e000eff8cc6e
https://github.com/ehb54/ultrascan3/commit/b91a5ae2fecdc63970efdf031426e000eff8cc6e
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A .github/sphinx-matcher.json
Log Message:
-----------
Add Sphinx problem matcher configuration for GitHub Actions
Commit: 45da34200ce91a23a4f1f8d168e7a1ee612b03b5
https://github.com/ehb54/ultrascan3/commit/45da34200ce91a23a4f1f8d168e7a1ee612b03b5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Annotate Sphinx build warnings in GitHub Actions workflow and update qthelp build step for improved error handling.
Commit: f3750319ef93a4a4b5f925ffaa38acd1ebb8f6f5
https://github.com/ehb54/ultrascan3/commit/f3750319ef93a4a4b5f925ffaa38acd1ebb8f6f5
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M .github/workflows/sphinx-doc-build.yml
Log Message:
-----------
Replace custom Sphinx warning annotation script with `sphinx-doc/github-problem-matcher` for streamlined GitHub Actions workflow.
Commit: bc2b74fbb9b5698c8269f2d6b060ce420ab6697a
https://github.com/ehb54/ultrascan3/commit/bc2b74fbb9b5698c8269f2d6b060ce420ab6697a
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
R .github/sphinx-matcher.json
Log Message:
-----------
Remove obsolete Sphinx problem matcher configuration from GitHub Actions.
Commit: 715a3fd86ec9bdb692b3e1fa0ce393a86548c213
https://github.com/ehb54/ultrascan3/commit/715a3fd86ec9bdb692b3e1fa0ce393a86548c213
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
Fix triplicates to triples
Commit: f1b1aba77a1f2da432e6262d842221eb275d2dd0
https://github.com/ehb54/ultrascan3/commit/f1b1aba77a1f2da432e6262d842221eb275d2dd0
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/fe_dmga_adv.png
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
update to latest
Commit: ff98f3a480b918b42a59334bc0506f87b59b5a37
https://github.com/ehb54/ultrascan3/commit/ff98f3a480b918b42a59334bc0506f87b59b5a37
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
M programs/us_integral/us_delete_models.h
Log Message:
-----------
first link change - integral
Commit: 584135021b461a9f753c2ac63b2f37df4cd85b0b
https://github.com/ehb54/ultrascan3/commit/584135021b461a9f753c2ac63b2f37df4cd85b0b
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-07 (Tue, 07 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/delseltrip.png
M doc/manual/source/common_dialogs.rst
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.h
Log Message:
-----------
update us_experiment show.help
Commit: 8e3da82ae6b7563f455e97718bb1f335a1c9bfcc
https://github.com/ehb54/ultrascan3/commit/8e3da82ae6b7563f455e97718bb1f335a1c9bfcc
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
Standardize terminology: replace "Triplicates" with "Triples" across documentation for clarity and consistency.
Commit: 7128a07267ee0a0fd7913ea221c2cd891b7099a8
https://github.com/ehb54/ultrascan3/commit/7128a07267ee0a0fd7913ea221c2cd891b7099a8
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
Log Message:
-----------
Improve test failure messages: use `ADD_FAILURE_AT` for precise file/line annotation and enhance regex and help file error clarity
Commit: 9cf710938424ec4c02179f22bb8da50b226085c6
https://github.com/ehb54/ultrascan3/commit/9cf710938424ec4c02179f22bb8da50b226085c6
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/unit-tests-v2.yml
M .github/workflows/unit-tests.yml
Log Message:
-----------
Add GoogleTest problem matcher to GitHub Actions workflows for enhanced test failure annotation
Commit: d849477c413c4de8c709970000b9beed563952aa
https://github.com/ehb54/ultrascan3/commit/d849477c413c4de8c709970000b9beed563952aa
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
M programs/us_2dsa/us_2dsa.h
M programs/us_config/us_color.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
Log Message:
-----------
unit test link updates
Commit: ba9907ccbb59086289b70ee897744f22b939a693
https://github.com/ehb54/ultrascan3/commit/ba9907ccbb59086289b70ee897744f22b939a693
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-08 (Wed, 08 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/select_prefilt.png
M doc/manual/source/common_dialogs.rst
M gui/us_select_edits.h
M gui/us_select_item.h
M gui/us_select_runs.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_font.cpp
Log Message:
-----------
unit tests help link update
Commit: 9a107befce5878fa969190700c2a2f6ef48ce068
https://github.com/ehb54/ultrascan3/commit/9a107befce5878fa969190700c2a2f6ef48ce068
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/analysprof_general.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/convert.rst
A doc/manual/source/ramp_data.rst
A doc/manual/source/us_administrator.rst
M doc/manual/source/us_edit.rst
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_config/us_advanced.cpp
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_select_lambdas.h
M programs/us_ramp/us_experiment_gui_ra.h
Log Message:
-----------
updates
Commit: 6fe43510daa8d32555c611669eaa32ab11da07ff
https://github.com/ehb54/ultrascan3/commit/6fe43510daa8d32555c611669eaa32ab11da07ff
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
Log Message:
-----------
images
Commit: 290b3ed2436ce1c133fb54567579f869c3e2ea70
https://github.com/ehb54/ultrascan3/commit/290b3ed2436ce1c133fb54567579f869c3e2ea70
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/dens_match.rst
M programs/us_density_match/us_model_params.h
Log Message:
-----------
update link
Commit: 6242d49b69ff170e32c1fd9ada173147b3744e39
https://github.com/ehb54/ultrascan3/commit/6242d49b69ff170e32c1fd9ada173147b3744e39
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A doc/manual/source/global_equil.rst
M doc/manual/source/us_edit.rst
Log Message:
-----------
update
Commit: 0924fcb4af9a8403c404ace536fffa1cf6209b6f
https://github.com/ehb54/ultrascan3/commit/0924fcb4af9a8403c404ace536fffa1cf6209b6f
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/astfem_sim.rst
M doc/manual/source/index.rst
M doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
M programs/us_astfem_sim/us_clipdata.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_exclude_profile.h
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_pcsa/us_mlplot.h
Log Message:
-----------
unit test
Commit: c8515e182cb1cddab6d51258efd8a99f97c8c667
https://github.com/ehb54/ultrascan3/commit/c8515e182cb1cddab6d51258efd8a99f97c8c667
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M .github/gtest-us.json
Log Message:
-----------
Fix matcher
Commit: ff35eb4d37eed1d9a2fdd2200d69a00adfcdb41c
https://github.com/ehb54/ultrascan3/commit/ff35eb4d37eed1d9a2fdd2200d69a00adfcdb41c
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/index.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/vhw_enhanced.rst
M programs/us_config/us_xpnhost_db.cpp
M programs/us_pcsa/us_mrecs_loader.h
Log Message:
-----------
sphynx links
Commit: 287fbcbd18bec2e702fabfb4298a69a0b62ee537
https://github.com/ehb54/ultrascan3/commit/287fbcbd18bec2e702fabfb4298a69a0b62ee537
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/doc-build.yml
A .github/workflows/sphinx-doc-build.yml
M .github/workflows/unit-tests-v2.yml
M .github/workflows/unit-tests.yml
M .gitignore
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/_static/images/delseltrip.png
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
A doc/manual/source/_static/images/fe_dmga_adv.png
A doc/manual/source/_static/images/select_prefilt.png
A doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_select.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/components.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dens_match.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/cells.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/optics.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/submit.rst
M doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
A doc/manual/source/global_equil.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/model_editor.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_adv.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
A doc/manual/source/ramp_data.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_select.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
A doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.h
M gui/us_buffer_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_get_run.h
M gui/us_load_auc.h
M gui/us_model_loader.h
M gui/us_select_edits.h
M gui/us_select_item.h
M gui/us_select_runs.h
M gui/us_select_triples.h
M gui/us_solution_gui.h
M programs/us_2dsa/us_2dsa.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_astfem_sim/us_clipdata.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_density_match/us_model_params.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_exclude_profile.h
M programs/us_edit/us_select_lambdas.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.h
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_mlplot.h
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_ramp/us_experiment_gui_ra.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
A test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
M utils/CMakeLists.txt
M utils/us_buffer.h
M utils/us_extern.h
Log Message:
-----------
Merge pull request #408 from ehb54/lukas/manual_test/make
Enhance documentation build system and improve Unicode handling
Commit: 29678f933d80ecac003838e4bde2c37a65512482
https://github.com/ehb54/ultrascan3/commit/29678f933d80ecac003838e4bde2c37a65512482
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-04-09 (Thu, 09 Apr 2026)
Changed paths:
M utils/us_run_protocol.cpp
Log Message:
-----------
GMP -- additional check for the protocol internals equality before submitting GMP run: check for operator (and revs & approvers)...
Commit: 77adb01c3a9c4133da796314b1007c031f6dd089
https://github.com/ehb54/ultrascan3/commit/77adb01c3a9c4133da796314b1007c031f6dd089
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-10 (Fri, 10 Apr 2026)
Changed paths:
M doc/manual/source/config.rst
Log Message:
-----------
check new branch
Commit: 0a0e0eca8a8da8aa4db25e74431e3d89b5808edb
https://github.com/ehb54/ultrascan3/commit/0a0e0eca8a8da8aa4db25e74431e3d89b5808edb
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-10 (Fri, 10 Apr 2026)
Changed paths:
Log Message:
-----------
Merge pull request #410 from ehb54/main
Merge pull request #408 from ehb54/lukas/manual_test/make
Commit: d2c99821961553c3153b8d32337f97b7511bcf81
https://github.com/ehb54/ultrascan3/commit/d2c99821961553c3153b8d32337f97b7511bcf81
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/rotor_calibration.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
triplicates
Commit: 6b12d783265172c421a37e224b8adad3f695e245
https://github.com/ehb54/ultrascan3/commit/6b12d783265172c421a37e224b8adad3f695e245
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
Log Message:
-----------
minor missplacing
Commit: c1845c6f4b9734df2f812c0b62d782d4f2609c9a
https://github.com/ehb54/ultrascan3/commit/c1845c6f4b9734df2f812c0b62d782d4f2609c9a
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
Log Message:
-----------
minor
Commit: 999f5967cfac93e336d82d6d37f650a584730945
https://github.com/ehb54/ultrascan3/commit/999f5967cfac93e336d82d6d37f650a584730945
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/__pycache__/auto_index.cpython-39.pyc
A doc/manual/source/_static/UltraScanIII.pdf
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/solutions/index.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-new.rst
M doc/manual/source/vhw_combine.rst
Log Message:
-----------
ref and doc updates
Commit: 5442f4062fa7bdbd225d10d4108a9913de662afe
https://github.com/ehb54/ultrascan3/commit/5442f4062fa7bdbd225d10d4108a9913de662afe
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/_static/images/load_us3.png
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/index.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
R doc/manual/source/rotor.rst
M doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
M doc/manual/source/simparams.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
referencing
Commit: 5d940737536ba92999909c398bc2c791d46ffd4d
https://github.com/ehb54/ultrascan3/commit/5d940737536ba92999909c398bc2c791d46ffd4d
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/Makefile
M doc/manual/source/common_dialogs.rst
M doc/manual/source/convert.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/start_page-new.rst
M doc/manual/source/start_page.rst
Log Message:
-----------
referencing update
Commit: 792ea02cbd0b900f1898086c35fa6b3c11e54201
https://github.com/ehb54/ultrascan3/commit/792ea02cbd0b900f1898086c35fa6b3c11e54201
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-13 (Mon, 13 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/_static/js/sphinx_highlight.js
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/config.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/multi-wavelength/mwl_spectra.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/run_details.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
Log Message:
-----------
reference update 2
Commit: 54a049bf6cfd4facaa834f4e91979253d3aa6b86
https://github.com/ehb54/ultrascan3/commit/54a049bf6cfd4facaa834f4e91979253d3aa6b86
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/_static/images/cmenu_help.png
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/rmsd_query.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/vhw_enhanced.rst
Log Message:
-----------
sphinx-build -M linkcheck /source /build -q --keep-going + DMGA protocol
Commit: 5ec1de61dba0f60ca68a98e66e6f8098e0d70384
https://github.com/ehb54/ultrascan3/commit/5ec1de61dba0f60ca68a98e66e6f8098e0d70384
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
M gui/us_abstractrotor_gui.h
M gui/us_rotor_gui.h
Log Message:
-----------
manual name change
Commit: 73e408bbda42ba6961f01111ffb11b59c8976fce
https://github.com/ehb54/ultrascan3/commit/73e408bbda42ba6961f01111ffb11b59c8976fce
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
M doc/manual/source/analysprof_general.rst
M doc/manual/source/index.rst
M doc/manual/source/us_administrator.rst
M doc/manual/source/us_investigator.rst
M doc/manual/source/us_project.rst
Log Message:
-----------
minor updates
Commit: aadeecb1340fbe3c58273b592171ad822dbd05dd
https://github.com/ehb54/ultrascan3/commit/aadeecb1340fbe3c58273b592171ad822dbd05dd
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
M doc/manual/source/index.rst
Log Message:
-----------
minor updates in Index
Commit: 26b3afbb4f6320ad269fb86433af8187d3a79256
https://github.com/ehb54/ultrascan3/commit/26b3afbb4f6320ad269fb86433af8187d3a79256
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/reporter_comrep.png
M doc/manual/source/index.rst
M doc/manual/source/reporter.rst
Log Message:
-----------
These MINOR changes are killing me
Commit: c35c8a4a2d552e064e5d40205f75deef685d0d6e
https://github.com/ehb54/ultrascan3/commit/c35c8a4a2d552e064e5d40205f75deef685d0d6e
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-14 (Tue, 14 Apr 2026)
Changed paths:
M doc/manual/source/fe_match/index.rst
Log Message:
-----------
Minoooor
Commit: abf6f6f3682a1676d7d1e8f7dd0f02419fb1954f
https://github.com/ehb54/ultrascan3/commit/abf6f6f3682a1676d7d1e8f7dd0f02419fb1954f
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-04-15 (Wed, 15 Apr 2026)
Changed paths:
M utils/us_run_protocol.cpp
Log Message:
-----------
Merge pull request #409 from ehb54/alexey-dev-issue814
GMP -- additional check for the protocol internals equality before submitting GMP runs: operator(s)
Commit: 79bb847a03d6a66112ac96beede10610bbba2246
https://github.com/ehb54/ultrascan3/commit/79bb847a03d6a66112ac96beede10610bbba2246
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-16 (Thu, 16 Apr 2026)
Changed paths:
M gui/us_plot.cpp
Log Message:
-----------
Ensure zoom check considers spectrogram items in `us_plot.cpp`
Commit: 0d3c4779cd3d7e85fc5bc4ad7e449a6afcaf99ff
https://github.com/ehb54/ultrascan3/commit/0d3c4779cd3d7e85fc5bc4ad7e449a6afcaf99ff
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-16 (Thu, 16 Apr 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Refactor signal-slot connections in `us_pseudo3d_combine.cpp` to use modern `&QButtonGroup::idReleased` syntax.
Commit: e3131079c98204bcde4f43e59bc6114c81d4d6bd
https://github.com/ehb54/ultrascan3/commit/e3131079c98204bcde4f43e59bc6114c81d4d6bd
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-16 (Thu, 16 Apr 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Refactor signal-slot connections in `us_pseudo3d_combine.cpp` to use modern syntax for improved readability and maintainability.
Commit: c85594c8e6e1edab8b7adae963da46ffe5913fc6
https://github.com/ehb54/ultrascan3/commit/c85594c8e6e1edab8b7adae963da46ffe5913fc6
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-04-16 (Thu, 16 Apr 2026)
Changed paths:
M gui/us_model_gui.cpp
M gui/us_model_gui.h
Log Message:
-----------
Model Selector -- allow Accept for GMP-generated models...
Commit: 6bcf83da27c47886d434f95cb5c8b5b393efcc79
https://github.com/ehb54/ultrascan3/commit/6bcf83da27c47886d434f95cb5c8b5b393efcc79
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-20 (Mon, 20 Apr 2026)
Changed paths:
A doc/manual/source/_static/images/us_spectrum-0-upded.png
M doc/manual/source/_static/images/us_spectrum-1.png
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_spectrum.rst
Log Message:
-----------
us_buoyancy introduction, Us_spectrum introduction,images and application updated.
Commit: b5159ec368c6454947e70949aaffbdde6b41c221
https://github.com/ehb54/ultrascan3/commit/b5159ec368c6454947e70949aaffbdde6b41c221
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-20 (Mon, 20 Apr 2026)
Changed paths:
M utils/us_run_protocol.cpp
Log Message:
-----------
Merge branch 'main' into haben/docs-crosslinking
Commit: 0d231234973612a639bab8cf3fc26fb81c88717f
https://github.com/ehb54/ultrascan3/commit/0d231234973612a639bab8cf3fc26fb81c88717f
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-20 (Mon, 20 Apr 2026)
Changed paths:
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/__pycache__/auto_index.cpython-39.pyc
A doc/manual/source/_static/UltraScanIII.pdf
A doc/manual/source/_static/images/cmenu_help.png
A doc/manual/source/_static/images/load_us3.png
A doc/manual/source/_static/images/reporter_comrep.png
A doc/manual/source/_static/images/us_spectrum-0-upded.png
M doc/manual/source/_static/images/us_spectrum-1.png
M doc/manual/source/_static/js/sphinx_highlight.js
M doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/multi-wavelength/mwl_spectra.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/reporter.rst
M doc/manual/source/rmsd_query.rst
R doc/manual/source/rotor.rst
M doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/simparams.rst
M doc/manual/source/solutions/index.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-new.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/us_investigator.rst
M doc/manual/source/us_project.rst
M doc/manual/source/us_spectrum.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
M gui/us_abstractrotor_gui.h
M gui/us_rotor_gui.h
Log Message:
-----------
Merge pull request #412 from ehb54/haben/docs-crosslinking
Document cross linking, manual help buttons and new pages added.
Commit: 47638222ab16a5ea91b3b1574d03c5038374b2a4
https://github.com/ehb54/ultrascan3/commit/47638222ab16a5ea91b3b1574d03c5038374b2a4
Author: Haben Gabir <haben.gabir at uleth.ca>
Date: 2026-04-21 (Tue, 21 Apr 2026)
Changed paths:
M doc/manual/source/start_page-mw.rst
Log Message:
-----------
replaced old image in doc
Commit: 1fece8e1783a00b7b4b2d53c0d3fb24784b20678
https://github.com/ehb54/ultrascan3/commit/1fece8e1783a00b7b4b2d53c0d3fb24784b20678
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-21 (Tue, 21 Apr 2026)
Changed paths:
Log Message:
-----------
Merge branch 'main' into haben/docs-crosslinking
Commit: c0dbe2538c5177518ec31c51efdbe5540a5df70d
https://github.com/ehb54/ultrascan3/commit/c0dbe2538c5177518ec31c51efdbe5540a5df70d
Author: HabGab <gabirh at myumanitoba.ca>
Date: 2026-04-21 (Tue, 21 Apr 2026)
Changed paths:
M doc/manual/source/start_page-mw.rst
Log Message:
-----------
Merge pull request #415 from ehb54/haben/docs-crosslinking
replaced old image in doc
Commit: 0d1643338fa17f6186a4ad8679ba4cccf89fd394
https://github.com/ehb54/ultrascan3/commit/0d1643338fa17f6186a4ad8679ba4cccf89fd394
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/__pycache__/auto_index.cpython-39.pyc
A doc/manual/source/_static/UltraScanIII.pdf
A doc/manual/source/_static/images/cmenu_help.png
A doc/manual/source/_static/images/load_us3.png
A doc/manual/source/_static/images/reporter_comrep.png
A doc/manual/source/_static/images/us_spectrum-0-upded.png
M doc/manual/source/_static/images/us_spectrum-1.png
M doc/manual/source/_static/js/sphinx_highlight.js
M doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/multi-wavelength/mwl_spectra.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/reporter.rst
M doc/manual/source/rmsd_query.rst
R doc/manual/source/rotor.rst
M doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/simparams.rst
M doc/manual/source/solutions/index.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-new.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/us_investigator.rst
M doc/manual/source/us_project.rst
M doc/manual/source/us_spectrum.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
M gui/us_abstractrotor_gui.h
M gui/us_rotor_gui.h
Log Message:
-----------
Merge branch 'main' into lukas/us_pseudo3d_combine
Commit: eca543a22ebb2991eb0b445f72e347063fbc8c72
https://github.com/ehb54/ultrascan3/commit/eca543a22ebb2991eb0b445f72e347063fbc8c72
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
Log Message:
-----------
standardize reference section formatting in start_page.rst and start_page-mw.rst
Commit: a4f1f53d77b4eb249b8afb6b09bf96f052e25542
https://github.com/ehb54/ultrascan3/commit/a4f1f53d77b4eb249b8afb6b09bf96f052e25542
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
fix VERSION file path, change default version from unknown to 4.1.0-dev, refactor release construction
Commit: db21d0c5a194f41886b613e65623c07d2bc40f9d
https://github.com/ehb54/ultrascan3/commit/db21d0c5a194f41886b613e65623c07d2bc40f9d
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M utils/us_defines.h
Log Message:
-----------
add conditional definitions for US_Version and US_Description in us_defines.h
Commit: 9cbcea1782add3926f1f936aa6696c0e418a0a33
https://github.com/ehb54/ultrascan3/commit/9cbcea1782add3926f1f936aa6696c0e418a0a33
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M .gitignore
Log Message:
-----------
add __pycache__ to .gitignore
Commit: 102b83ab79cfa7cf1af1b528d6422565dd8b4bba
https://github.com/ehb54/ultrascan3/commit/102b83ab79cfa7cf1af1b528d6422565dd8b4bba
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
fix spacing for no local changes
Commit: ffce8c0558eef867b786192bfa509ba0b615e715
https://github.com/ehb54/ultrascan3/commit/ffce8c0558eef867b786192bfa509ba0b615e715
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M utils/us_defines.h
Log Message:
-----------
Remove version and description guards in us_defines.h
Commit: 36dc1785d98214993d36bfc9d3b4d8274ddf93ba
https://github.com/ehb54/ultrascan3/commit/36dc1785d98214993d36bfc9d3b4d8274ddf93ba
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Update path comment for VERSION file location
Commit: 8cf8988f671379dcf266a35155e091020469e547
https://github.com/ehb54/ultrascan3/commit/8cf8988f671379dcf266a35155e091020469e547
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M programs/us_2dsa/us_show_norm.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_integral/us_integral.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
Log Message:
-----------
Refactor signal-slot connections across multiple modules to use modern syntax for improved readability and maintainability.
Commit: e55fdb6a821372263be14ebfd0bd4debd621c904
https://github.com/ehb54/ultrascan3/commit/e55fdb6a821372263be14ebfd0bd4debd621c904
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M gui/us_plot.cpp
Log Message:
-----------
Ensure axis checks account for spectrogram items in `us_plot.cpp`
Commit: 33967fac5d6dd4415b67c2e8bc928de7aad9504b
https://github.com/ehb54/ultrascan3/commit/33967fac5d6dd4415b67c2e8bc928de7aad9504b
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M programs/us_pcsa/us_analysis_control_pc.cpp
Log Message:
-----------
Refactor signal-slot connections in `us_analysis_control_pc.cpp` to use modern syntax for improved readability and maintainability.
Commit: 3c2f9d3ede41ffdcd79d070e45afb8a238e729fb
https://github.com/ehb54/ultrascan3/commit/3c2f9d3ede41ffdcd79d070e45afb8a238e729fb
Author: Doluk <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Simplify lambda expressions in `us_pseudo3d_combine.cpp` by removing redundant `&` capture.
Commit: c20633e9c5e7406950dbc174cae33f60cb8c2d17
https://github.com/ehb54/ultrascan3/commit/c20633e9c5e7406950dbc174cae33f60cb8c2d17
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M doc/manual/source/conf.py
Log Message:
-----------
Remove future annotations import
Removed future annotations import from conf.py.
Commit: 60491d8fe675ed9c20c175e16153aa1a2f594186
https://github.com/ehb54/ultrascan3/commit/60491d8fe675ed9c20c175e16153aa1a2f594186
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M .gitignore
Log Message:
-----------
Add __pycache__ to .gitignore
Commit: 2cb09af8870f32c9aa5e3463851c91e6741e0bdd
https://github.com/ehb54/ultrascan3/commit/2cb09af8870f32c9aa5e3463851c91e6741e0bdd
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M .gitignore
M doc/manual/source/conf.py
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
Log Message:
-----------
Merge pull request #416 from ehb54/lukas/manual_versioning
Standardize formatting and update versioning in manual
Commit: eba2b0e533d5a81cad63c0edd5319256ba404cdd
https://github.com/ehb54/ultrascan3/commit/eba2b0e533d5a81cad63c0edd5319256ba404cdd
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M .gitignore
M doc/manual/source/conf.py
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page.rst
Log Message:
-----------
Merge branch 'main' into lukas/us_pseudo3d_combine
Commit: 46ff46e5434d882cb83343ffd5b854bf6f41f7d1
https://github.com/ehb54/ultrascan3/commit/46ff46e5434d882cb83343ffd5b854bf6f41f7d1
Author: Borries Demeler <7659499+demeler at users.noreply.github.com>
Date: 2026-04-22 (Wed, 22 Apr 2026)
Changed paths:
M .gitignore
M doc/manual/Makefile
M doc/manual/source/2dsa/2dsa_analys.rst
M doc/manual/source/2dsa/2dsa_main.rst
M doc/manual/source/2dsa/index.rst
A doc/manual/source/__pycache__/auto_index.cpython-39.pyc
A doc/manual/source/_static/UltraScanIII.pdf
A doc/manual/source/_static/images/cmenu_help.png
A doc/manual/source/_static/images/load_us3.png
A doc/manual/source/_static/images/reporter_comrep.png
A doc/manual/source/_static/images/us_spectrum-0-upded.png
M doc/manual/source/_static/images/us_spectrum-1.png
M doc/manual/source/_static/js/sphinx_highlight.js
M doc/manual/source/analysprof_general.rst
M doc/manual/source/analyte/analyte_edit.rst
M doc/manual/source/analyte/analyte_new.rst
M doc/manual/source/analyte/analyte_settings.rst
M doc/manual/source/astfem_sim.rst
M doc/manual/source/buffer/buffer_edit.rst
M doc/manual/source/buffer/buffer_new.rst
M doc/manual/source/buffer/buffer_select.rst
M doc/manual/source/buffer/buffer_settings.rst
M doc/manual/source/buoyancy_editor.rst
M doc/manual/source/combine_models.rst
M doc/manual/source/common_dialogs.rst
M doc/manual/source/conf.py
M doc/manual/source/config.rst
M doc/manual/source/convert.rst
M doc/manual/source/dmga_init.rst
M doc/manual/source/dmga_init_constr.rst
M doc/manual/source/experiment/general.rst
M doc/manual/source/experiment/import.rst
M doc/manual/source/experiment/liveupdate.rst
M doc/manual/source/experiment/range.rst
M doc/manual/source/experiment/rotor.rst
M doc/manual/source/experiment/solutions.rst
M doc/manual/source/experiment/speeds.rst
M doc/manual/source/export_legacy.rst
M doc/manual/source/fe_match/fe_dmga_adv.rst
M doc/manual/source/fe_match/fe_match_main.rst
M doc/manual/source/fe_match/fe_match_simulate.rst
M doc/manual/source/fe_match/index.rst
M doc/manual/source/ga_initialize.rst
M doc/manual/source/gmp/gmp_automation.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
M doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
M doc/manual/source/gmp/gmp_protocol_development.rst
M doc/manual/source/grid_editor.rst
M doc/manual/source/idist_combine.rst
M doc/manual/source/index.rst
M doc/manual/source/manage_data.rst
M doc/manual/source/multi-wavelength/index.rst
M doc/manual/source/multi-wavelength/mwl_species_fit.rst
M doc/manual/source/multi-wavelength/mwl_species_sim.rst
M doc/manual/source/multi-wavelength/mwl_spectra.rst
M doc/manual/source/pcsa/pcsa.rst
M doc/manual/source/pcsa/pcsa_analys.rst
M doc/manual/source/pcsa/pcsa_results.rst
M doc/manual/source/pseudo3d.rst
M doc/manual/source/reporter.rst
M doc/manual/source/rmsd_query.rst
R doc/manual/source/rotor.rst
M doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
M doc/manual/source/run_details.rst
M doc/manual/source/second_moment.rst
M doc/manual/source/simparams.rst
M doc/manual/source/solutions/index.rst
M doc/manual/source/solutions/solution_edit.rst
M doc/manual/source/solutions/solution_new.rst
M doc/manual/source/solutions/solution_settings.rst
M doc/manual/source/start_page-int.rst
M doc/manual/source/start_page-mw.rst
M doc/manual/source/start_page-new.rst
M doc/manual/source/start_page-rpt.rst
M doc/manual/source/start_page.rst
M doc/manual/source/time_derivative.rst
M doc/manual/source/us_administrator.rst
M doc/manual/source/us_buoyancy.rst
M doc/manual/source/us_edit.rst
M doc/manual/source/us_equiltime.rst
M doc/manual/source/us_fds_filemanager.rst
M doc/manual/source/us_investigator.rst
M doc/manual/source/us_project.rst
M doc/manual/source/us_spectrum.rst
M doc/manual/source/vhw_combine.rst
M doc/manual/source/vhw_enhanced.rst
M doc/manual/source/xpn_viewer.rst
M gui/us_abstractrotor_gui.h
M gui/us_rotor_gui.h
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue819
Commit: bf1f52b701e7d998a5d22f3fb3cfac685fe25b11
https://github.com/ehb54/ultrascan3/commit/bf1f52b701e7d998a5d22f3fb3cfac685fe25b11
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-04-25 (Sat, 25 Apr 2026)
Changed paths:
M gui/us_plot.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_integral/us_integral.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Merge pull request #413 from ehb54/lukas/us_pseudo3d_combine
Lukas/us pseudo3d combine
Commit: 409fa95fadf7055d7f1a80221d9570136a3c74ea
https://github.com/ehb54/ultrascan3/commit/409fa95fadf7055d7f1a80221d9570136a3c74ea
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-22 (Fri, 22 May 2026)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
Log Message:
-----------
GMP-dataDisk: 1.EXP.: 4. Cells -- Fix logic for changing centerpieces only for cells uploaded from data-from-diks; depending on rotor choice, if uploaded data contains counter-balancing cell, then mirror centerpieces; if no counter-balancing cell exists, do not trigger mirroring, keep cell disabled...
Commit: c2f09171367a1f7251e1b6c2f115e67a2ec2aa7e
https://github.com/ehb54/ultrascan3/commit/c2f09171367a1f7251e1b6c2f115e67a2ec2aa7e
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-05-23 (Sat, 23 May 2026)
Changed paths:
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M scripts/build.sh
Log Message:
-----------
Fix: MariaDB Connector/C auth plugin packaging for Windows and Linux desktop deploys
Commit: 955a18e6afbf33a71fb3cb653635e8a1fdcba309
https://github.com/ehb54/ultrascan3/commit/955a18e6afbf33a71fb3cb653635e8a1fdcba309
Author: Saeed <github.com/samo38>
Date: 2026-05-25 (Mon, 25 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
Log Message:
-----------
us_extinction_gui: load multiple files to the target list in the us_extinction
Commit: 8ffe17a2ff45c1bd98abb4f443c8e85a44607408
https://github.com/ehb54/ultrascan3/commit/8ffe17a2ff45c1bd98abb4f443c8e85a44607408
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-25 (Mon, 25 May 2026)
Changed paths:
M gui/us_properties.cpp
Log Message:
-----------
Database:Manage Models & US_Astfem: -- preclude segfault when clicking Edit Current Analyte in properties when no analyte uploaded and selected...
Commit: d65cc7b90bd9cfd09a504b97d1e991b5e9709798
https://github.com/ehb54/ultrascan3/commit/d65cc7b90bd9cfd09a504b97d1e991b5e9709798
Author: Saeed <github.com/samo38>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
fix the ct_plt range for D values
Commit: 70c051b3319c22d073aec3e7963574dd431d374b
https://github.com/ehb54/ultrascan3/commit/70c051b3319c22d073aec3e7963574dd431d374b
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
Log Message:
-----------
Merge pull request #421 from samo38/ticket_821
ticket 821: load multiple files in the Spectra Fitter
Commit: 47568edd1c571d37f6d337dac8403bf2b63355a7
https://github.com/ehb54/ultrascan3/commit/47568edd1c571d37f6d337dac8403bf2b63355a7
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue847
Commit: 9caa64325023045f92d621ea29c7c24238abe010
https://github.com/ehb54/ultrascan3/commit/9caa64325023045f92d621ea29c7c24238abe010
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue845
Commit: 3f5b75b4f2c1f0e13c26e4f5200970f1a849ccce
https://github.com/ehb54/ultrascan3/commit/3f5b75b4f2c1f0e13c26e4f5200970f1a849ccce
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_properties.cpp
Log Message:
-----------
[Warning message edited]Database:Manage Models & US_Astfem: -- preclude segfault when clicking Edit Current Analyte in properties when no analyte uploaded and selected...
Commit: 8b4bb030d983d019042fbafc5db11ecddb4cef59
https://github.com/ehb54/ultrascan3/commit/8b4bb030d983d019042fbafc5db11ecddb4cef59
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_properties.cpp
Log Message:
-----------
[Warning message edited]Database:Manage Models & US_Astfem: -- preclude segfault when clicking Edit Current Analyte in properties when no analyte uploaded and selected...
Commit: 4c2a5827c767a8efdf04d90f65582b75aa7b8f7b
https://github.com/ehb54/ultrascan3/commit/4c2a5827c767a8efdf04d90f65582b75aa7b8f7b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-26 (Tue, 26 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
Log Message:
-----------
Merge branch 'alexey-dev-issue845' of github.com:ehb54/ultrascan3 into alexey-dev-issue845
Commit: e41650e2a92988aaf178bb235f6fd635ae7732a5
https://github.com/ehb54/ultrascan3/commit/e41650e2a92988aaf178bb235f6fd635ae7732a5
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-05-27 (Wed, 27 May 2026)
Changed paths:
M gui/us_properties.cpp
Log Message:
-----------
Merge pull request #422 from ehb54/alexey-dev-issue845
Database:Manage Models & US_Astfem: -- preclude segfault when clicking Edit Current Analyte in properties when no analyte uploaded and selected.
Commit: 3c4763f65a21b749bfe07dc42e2128122b695384
https://github.com/ehb54/ultrascan3/commit/3c4763f65a21b749bfe07dc42e2128122b695384
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-05-27 (Wed, 27 May 2026)
Changed paths:
M gui/us_properties.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue847
Commit: 2d6c96d3534c682e0f41a653e60626ac9ca3cda5
https://github.com/ehb54/ultrascan3/commit/2d6c96d3534c682e0f41a653e60626ac9ca3cda5
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-27 (Wed, 27 May 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
1. EXP. setup for: GMP | R&D | Protocol Dev. -- (1) Previous Panel: disable when 1st tab index; (2) Next Panel: disable when last tab index; Enable both buttons otherwise...
Commit: 336ecdb767221596e40fe03b4109ae958a244155
https://github.com/ehb54/ultrascan3/commit/336ecdb767221596e40fe03b4109ae958a244155
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-05-28 (Thu, 28 May 2026)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
Log Message:
-----------
Merge pull request #420 from ehb54/alexey-dev-issue847
GMP-dataDisk: 1.EXP.: 4. Cells -- Fix logic for changing centerpiece…
Commit: 4271414177534df7efc4fa581c55c7156f3ddabd
https://github.com/ehb54/ultrascan3/commit/4271414177534df7efc4fa581c55c7156f3ddabd
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-28 (Thu, 28 May 2026)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue855
Commit: 128150af07823bd4765583981c14e72a886ececb
https://github.com/ehb54/ultrascan3/commit/128150af07823bd4765583981c14e72a886ececb
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-28 (Thu, 28 May 2026)
Changed paths:
M gui/us_extinction_gui.cpp
M gui/us_plot.cpp
M gui/us_properties.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_integral/us_integral.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue819
Commit: ac4b2e251a870242701d557b0f9fb1bde83f1ba1
https://github.com/ehb54/ultrascan3/commit/ac4b2e251a870242701d557b0f9fb1bde83f1ba1
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-28 (Thu, 28 May 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
Merge pull request #424 from ehb54/alexey-dev-issue855
1. EXP. setup for: GMP | R&D | Protocol Dev. -- Previous Panel & Next Panel buttons
Commit: 4d55ef620df76f15f779937d88eae46dc5476934
https://github.com/ehb54/ultrascan3/commit/4d55ef620df76f15f779937d88eae46dc5476934
Author: Saeed <github.com/samo38>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
us_pseudo3d_combine.cpp: update ct range
Commit: bfbbceba435317993ba1177f8d6ed0a5810550da
https://github.com/ehb54/ultrascan3/commit/bfbbceba435317993ba1177f8d6ed0a5810550da
Author: Saeed <github.com/samo38>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
update ct range
Commit: 3650572bd17f9308587dfbf1d1410498922d61fc
https://github.com/ehb54/ultrascan3/commit/3650572bd17f9308587dfbf1d1410498922d61fc
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
GMP: 2. Rotor/Labs : in a non-typical situation where oper. or revs. or appr, lists are empty, disable Add to List button...
Commit: fada6882842c5ae682cd424efd87744e75cace23
https://github.com/ehb54/ultrascan3/commit/fada6882842c5ae682cd424efd87744e75cace23
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge pull request #426 from ehb54/alexey-dev-issue857
GMP: 2. Rotor/Labs tab: Add to List bttns
Commit: a2adfa71f41c800e6f524a3cc455920214b68843
https://github.com/ehb54/ultrascan3/commit/a2adfa71f41c800e6f524a3cc455920214b68843
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue819
Commit: 7d69bb500e80be10d428dd0e6858038dfd36f238
https://github.com/ehb54/ultrascan3/commit/7d69bb500e80be10d428dd0e6858038dfd36f238
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-05-29 (Fri, 29 May 2026)
Changed paths:
M gui/us_model_gui.cpp
M gui/us_model_gui.h
Log Message:
-----------
Merge pull request #414 from ehb54/alexey-dev-issue819
Model Selector -- allow Accept for GMP-generated models...
Commit: 081a9573c4b25b4a1160d69485efb294378d580d
https://github.com/ehb54/ultrascan3/commit/081a9573c4b25b4a1160d69485efb294378d580d
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge branch 'main' into t842_gaplot
Commit: 3e9d2e13ca1148add7cf8287085ba3db3a5863c2
https://github.com/ehb54/ultrascan3/commit/3e9d2e13ca1148add7cf8287085ba3db3a5863c2
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M programs/us_config/us_database.cpp
Log Message:
-----------
Refactor default database selection process
Refactor database selection logic to avoid redundant calls and improve clarity.
Commit: c4f9c771e1b24dc0e93e5dca2db4cdb010f1dc9e
https://github.com/ehb54/ultrascan3/commit/c4f9c771e1b24dc0e93e5dca2db4cdb010f1dc9e
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M programs/us_config/us_database.cpp
Log Message:
-----------
Update database selection logic for default DB
Commit: 88b1ac951023136e21e2f1ab0c2fd000ad06eac8
https://github.com/ehb54/ultrascan3/commit/88b1ac951023136e21e2f1ab0c2fd000ad06eac8
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
R .github/workflows/unit-tests.yml
Log Message:
-----------
Delete .github/workflows/unit-tests.yml
Commit: 59261739cdcce7bb342cec6d0eca84439819b56d
https://github.com/ehb54/ultrascan3/commit/59261739cdcce7bb342cec6d0eca84439819b56d
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
Log Message:
-----------
Fix: Copy MariaDB auth plugins to build directory for development
Commit: 8b547ef902833338a45d98fe066ac0c767fdf626
https://github.com/ehb54/ultrascan3/commit/8b547ef902833338a45d98fe066ac0c767fdf626
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M CMakeLists.txt
Log Message:
-----------
Fix: Add US3 version string to Linux deployment CMake configuration
Commit: 845441e33ec92b9dc3657f2b7871f2183122a73b
https://github.com/ehb54/ultrascan3/commit/845441e33ec92b9dc3657f2b7871f2183122a73b
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M CMakeLists.txt
M CMakePresets.json
M scripts/build.ps1
Log Message:
-----------
Fix: Enhance Windows deployment process for Qt tools in CMake and PowerShell scripts
Commit: cae5416d082d2ffb9ce37e3299da1d6ba4818688
https://github.com/ehb54/ultrascan3/commit/cae5416d082d2ffb9ce37e3299da1d6ba4818688
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-05-31 (Sun, 31 May 2026)
Changed paths:
M CMakeLists.txt
M admin/cmake/toolchain.cmake
M scripts/build.ps1
Log Message:
-----------
Fix: Improve windeployqt handling for Windows ARM64 and x64 builds in CMake
Commit: ffe103a9cda3bf0765d63babc1383b5b73c60f00
https://github.com/ehb54/ultrascan3/commit/ffe103a9cda3bf0765d63babc1383b5b73c60f00
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-06-01 (Mon, 01 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
Log Message:
-----------
Merge pull request #429 from ehb54/lukas/unit_test_v1_removal
Delete .github/workflows/unit-tests.yml
Commit: ba2e69f89d211b977e99532f5a2ee4f5635fe241
https://github.com/ehb54/ultrascan3/commit/ba2e69f89d211b977e99532f5a2ee4f5635fe241
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-06-01 (Mon, 01 Jun 2026)
Changed paths:
M scripts/build.ps1
Log Message:
-----------
Fix: Enhance build script for Windows by adding build type handling and ensuring full build before packaging
Commit: 07ebae5c1a9fb79e304cf43ad4969948dbf53c1f
https://github.com/ehb54/ultrascan3/commit/07ebae5c1a9fb79e304cf43ad4969948dbf53c1f
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-06-01 (Mon, 01 Jun 2026)
Changed paths:
M CMakeLists.txt
M programs/us/us.cpp
Log Message:
-----------
Fix: Copy MariaDB auth plugins to build directory for Windows development
Commit: 4d0251f74bed05cb83787a04885731d3b152f4b5
https://github.com/ehb54/ultrascan3/commit/4d0251f74bed05cb83787a04885731d3b152f4b5
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-01 (Mon, 01 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
M gui/us_extinction_gui.cpp
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_properties.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
Merge branch 'main' into 840-bug-cmake-build---mariadb-plugin-missing-macos
Commit: ce276826700547ec7106f9d689b8d998e2001315
https://github.com/ehb54/ultrascan3/commit/ce276826700547ec7106f9d689b8d998e2001315
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-02 (Tue, 02 Jun 2026)
Changed paths:
M programs/us/us.cpp
Log Message:
-----------
Potential fix for pull request finding
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot at users.noreply.github.com>
Commit: 48619c5707bd21b1fca1d26626f0d42608ec56a7
https://github.com/ehb54/ultrascan3/commit/48619c5707bd21b1fca1d26626f0d42608ec56a7
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-02 (Tue, 02 Jun 2026)
Changed paths:
M CMakeLists.txt
Log Message:
-----------
Potential fix for pull request finding
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot at users.noreply.github.com>
Commit: 7c437d150e86857f0f355ba642049e8298aa2967
https://github.com/ehb54/ultrascan3/commit/7c437d150e86857f0f355ba642049e8298aa2967
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-02 (Tue, 02 Jun 2026)
Changed paths:
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M admin/cmake/toolchain.cmake
M programs/us/us.cpp
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
Merge pull request #428 from ehb54/840-bug-cmake-build---mariadb-plugin-missing
Fix: MariaDB Connector/C auth plugin packaging for Windows and Linux …
Commit: c9483a2b187a96210afec12c05ea37f140d27c77
https://github.com/ehb54/ultrascan3/commit/c9483a2b187a96210afec12c05ea37f140d27c77
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-02 (Tue, 02 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M admin/cmake/toolchain.cmake
M programs/us/us.cpp
M scripts/build.ps1
M scripts/build.sh
Log Message:
-----------
Merge branch 'main' into lukas/us_config_db
Commit: 77b0d98c96b9428b9058a18a1cde8a5234fd77de
https://github.com/ehb54/ultrascan3/commit/77b0d98c96b9428b9058a18a1cde8a5234fd77de
Author: Lukas Dobler <69309597+doluk at users.noreply.github.com>
Date: 2026-06-03 (Wed, 03 Jun 2026)
Changed paths:
M programs/us_config/us_database.cpp
Log Message:
-----------
Merge pull request #427 from ehb54/lukas/us_config_db
Refactor default database selection process
Commit: 8109d2d1f8a808b98af3173590fdf0a1bd470a4a
https://github.com/ehb54/ultrascan3/commit/8109d2d1f8a808b98af3173590fdf0a1bd470a4a
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-03 (Wed, 03 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
GMP, Prot_devel, utils/xpn_data : remove unused function, ensure xpn (optima) host is configured during xpn->connect...
Commit: 25fa9df5a94aabc9a5a53be7d6e15d767a17c238
https://github.com/ehb54/ultrascan3/commit/25fa9df5a94aabc9a5a53be7d6e15d767a17c238
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-04 (Thu, 04 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge pull request #430 from ehb54/alexey-dev-issue872
GMP, Prot_devel, utils/xpn_data : remove unused function, ensure xpn host is configured…
Commit: 6cf1e2de27f3dc7a74383050c085f36898bb156b
https://github.com/ehb54/ultrascan3/commit/6cf1e2de27f3dc7a74383050c085f36898bb156b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-05 (Fri, 05 Jun 2026)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
GMP, R&D -- correct interplay between scan counts, scan interval, minimum scan interval in 3. Sppeds and 7. Ranges ...
Commit: 5ce35ace4e6f0bd6eb3de4111d93a0c754c613e8
https://github.com/ehb54/ultrascan3/commit/5ce35ace4e6f0bd6eb3de4111d93a0c754c613e8
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-05 (Fri, 05 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
Log Message:
-----------
GMP, R&D -- The first sentence after Attention should not have started with a period. Line should have started with "Please..."....
Commit: 439bf47d73c1de196a1c091f8629403731ac42e6
https://github.com/ehb54/ultrascan3/commit/439bf47d73c1de196a1c091f8629403731ac42e6
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-05 (Fri, 05 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
Log Message:
-----------
Merge pull request #432 from ehb54/alexey-dev-issue873
GMP, R&D -- The first sentence after Attention should not have started with a period. Line should have started with "Please..."....
Commit: c70b0809570e8451264f061bfddbf0d90ed7d45b
https://github.com/ehb54/ultrascan3/commit/c70b0809570e8451264f061bfddbf0d90ed7d45b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-05 (Fri, 05 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue874
Commit: ab4e29f258a4a76852473bb029a8d05af5101e3b
https://github.com/ehb54/ultrascan3/commit/ab4e29f258a4a76852473bb029a8d05af5101e3b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-07 (Sun, 07 Jun 2026)
Changed paths:
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
Merge pull request #431 from ehb54/alexey-dev-issue874
GMP, R&D -- correct interplay between scan counts, scan interval, min. scan interval
Commit: b3e1c3148e849dfa0bb3115413e07983b919844e
https://github.com/ehb54/ultrascan3/commit/b3e1c3148e849dfa0bb3115413e07983b919844e
Author: Saeed <github.com/samo38>
Date: 2026-06-08 (Mon, 08 Jun 2026)
Changed paths:
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
add a label to show the buffer manual state
Commit: f9dc1123f5d504527a1a5a5f98992c035cda5368
https://github.com/ehb54/ultrascan3/commit/f9dc1123f5d504527a1a5a5f98992c035cda5368
Author: Saeed <github.com/samo38>
Date: 2026-06-08 (Mon, 08 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t870_buffer
Commit: 372d4a9b863855920c8f9fcc63e1e874250bcdae
https://github.com/ehb54/ultrascan3/commit/372d4a9b863855920c8f9fcc63e1e874250bcdae
Author: Saeed <github.com/samo38>
Date: 2026-06-08 (Mon, 08 Jun 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
auto scale xy after selecting a new parameter
Commit: c00094277c02fa9f1bbf1ea45e6c392960605b9e
https://github.com/ehb54/ultrascan3/commit/c00094277c02fa9f1bbf1ea45e6c392960605b9e
Author: Saeed <github.com/samo38>
Date: 2026-06-08 (Mon, 08 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M admin/cmake/toolchain.cmake
M gui/us_extinction_gui.cpp
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_properties.cpp
M programs/us/us.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_config/us_database.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M scripts/build.ps1
M scripts/build.sh
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_822_pseudo3d_plot
Commit: f28a5e62b10d404ecce483e3109f42b1623253c4
https://github.com/ehb54/ultrascan3/commit/f28a5e62b10d404ecce483e3109f42b1623253c4
Author: Saeed <github.com/samo38>
Date: 2026-06-09 (Tue, 09 Jun 2026)
Changed paths:
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
Log Message:
-----------
fixed type cast warnings in us_mpi_analysis.cpp, ga_worker.cpp
Commit: f3611e7f434e44d3d1c61e7d0e945a94035388f9
https://github.com/ehb54/ultrascan3/commit/f3611e7f434e44d3d1c61e7d0e945a94035388f9
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
Log Message:
-----------
Merge pull request #435 from samo38/t861_security_warn
clean security warnings
Commit: f80b73498a4973369419673e90274f59d9b598b3
https://github.com/ehb54/ultrascan3/commit/f80b73498a4973369419673e90274f59d9b598b3
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t870_buffer
Commit: 3dddb9117fd90c1f6e1fdeec16f309bcc7b74a10
https://github.com/ehb54/ultrascan3/commit/3dddb9117fd90c1f6e1fdeec16f309bcc7b74a10
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_822_pseudo3d_plot
Commit: bde95ecaf2c093c38c510529ade5c772aeb0d058
https://github.com/ehb54/ultrascan3/commit/bde95ecaf2c093c38c510529ade5c772aeb0d058
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M admin/cmake/toolchain.cmake
M programs/us/us.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_config/us_database.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M scripts/build.ps1
M scripts/build.sh
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t842_gaplot
Commit: 5be7ae9df7ec29fa88487a9dc72834ca6c3ab515
https://github.com/ehb54/ultrascan3/commit/5be7ae9df7ec29fa88487a9dc72834ca6c3ab515
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_config/us_newxpnhost_db.cpp
Log Message:
-----------
US_Config:Intruments -- incorporate test_Connectivity into Save routing, remove extra connectivity check step...
Commit: 32473b578707e256cf293eb356d873413dd769b6
https://github.com/ehb54/ultrascan3/commit/32473b578707e256cf293eb356d873413dd769b6
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_config/us_newxpnhost_db.cpp
Log Message:
-----------
Merge pull request #436 from ehb54/alexey-dev-issue882
US_Config:Intruments -- incorporate test_Connectivity into Save routing
Commit: 4aec245df7e6c8b1e030e812298d6cba7cab845e
https://github.com/ehb54/ultrascan3/commit/4aec245df7e6c8b1e030e812298d6cba7cab845e
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
GMP: 2. LIVE_UPDATE -- spelling error fixed...
Commit: 12f71524c0445a97e2b0b1aaf3d53f6736ea6301
https://github.com/ehb54/ultrascan3/commit/12f71524c0445a97e2b0b1aaf3d53f6736ea6301
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-10 (Wed, 10 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
GMP: -- modify message for marking run as FAILED/NPT FAILED...
Commit: 3c7169cde650dedca3d3402f744d3253f88868d5
https://github.com/ehb54/ultrascan3/commit/3c7169cde650dedca3d3402f744d3253f88868d5
Author: Saeed <github.com/samo38>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M admin/cmake/packaging/linux/LinuxDeploy.cmake
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/windows/WinDeploy.cmake
M admin/cmake/toolchain.cmake
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M programs/us/us.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_config/us_database.cpp
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M scripts/build.ps1
M scripts/build.sh
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_solve_sim.cpp
M utils/us_xpn_data.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t842_gaplot
Commit: 1be10ca817665f8309bb3df08852200424397547
https://github.com/ehb54/ultrascan3/commit/1be10ca817665f8309bb3df08852200424397547
Author: Saeed <github.com/samo38>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
Log Message:
-----------
Merge remote-tracking branch 'origin/t842_gaplot' into t842_gaplot
Commit: 6a2abeacf5fcb63c4355bea33d0a8665ebf1aea3
https://github.com/ehb54/ultrascan3/commit/6a2abeacf5fcb63c4355bea33d0a8665ebf1aea3
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
GMP main window -- modify text in the upper textarea...
Commit: 3fbee9fcc1783c2c585c16e2fe0cdb6c22982a61
https://github.com/ehb54/ultrascan3/commit/3fbee9fcc1783c2c585c16e2fe0cdb6c22982a61
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
[1]GMP main window -- modify text in the upper textarea...
Commit: 290881f0fb957f5129113ca6c0d363cda44d453e
https://github.com/ehb54/ultrascan3/commit/290881f0fb957f5129113ca6c0d363cda44d453e
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge pull request #437 from ehb54/alexey-dev-issue885
GMP: 2. LIVE_UPDATE -- spelling error fixed...
Commit: 51eac7bb6878f0d5e5b586795486cea3043d3d0c
https://github.com/ehb54/ultrascan3/commit/51eac7bb6878f0d5e5b586795486cea3043d3d0c
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue887
Commit: 27153f63f856b1d20b1465999a14d3e3281e707a
https://github.com/ehb54/ultrascan3/commit/27153f63f856b1d20b1465999a14d3e3281e707a
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-11 (Thu, 11 Jun 2026)
Changed paths:
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue886
Commit: 4241a57028574e3cd23f3c3291191974fc72a7f5
https://github.com/ehb54/ultrascan3/commit/4241a57028574e3cd23f3c3291191974fc72a7f5
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-12 (Fri, 12 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
Merge pull request #438 from ehb54/alexey-dev-issue887
GMP: -- modify message for marking run as FAILED/NOT FAILED...
Commit: 5b1e1e57275a9d2d7788c8c73c68af8bffc728aa
https://github.com/ehb54/ultrascan3/commit/5b1e1e57275a9d2d7788c8c73c68af8bffc728aa
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-12 (Fri, 12 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue886
Commit: 1b9d32c8d947abd0215b70dbe7495fc98759a47b
https://github.com/ehb54/ultrascan3/commit/1b9d32c8d947abd0215b70dbe7495fc98759a47b
Author: Saeed <github.com/samo38>
Date: 2026-06-12 (Fri, 12 Jun 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
update the ct range by data
Commit: 1f2dea5900a814f27165ae2bc9b401c3dfee187c
https://github.com/ehb54/ultrascan3/commit/1f2dea5900a814f27165ae2bc9b401c3dfee187c
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-12 (Fri, 12 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
Log Message:
-----------
Merge pull request #439 from ehb54/alexey-dev-issue886
GMP main window -- modify text in the upper textarea...
Commit: 5e1874151de9b54802972297c327c677ea4ed1c9
https://github.com/ehb54/ultrascan3/commit/5e1874151de9b54802972297c327c677ea4ed1c9
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-12 (Fri, 12 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
GMP: dataDisk -- disable all upcoming tabs in 1. EXP settings when dataDisk option clicked; unlock only when valid .auc data-from-disk uploaded & downstream protocol parameters are generated; correct behavior for Next/Previous lower buttons: disable Next when at 2. Lab/Rotor tab, enable when back to 1. General; disable when back to 2. Lab/Rorot ...
Commit: cbb216d0d629fbbe7c3294431c08f61989b2e7a2
https://github.com/ehb54/ultrascan3/commit/cbb216d0d629fbbe7c3294431c08f61989b2e7a2
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
upadte ct x and y in the set_limits()
Commit: 67a4d242dabc14876d9354b93434c818b5baf7ec
https://github.com/ehb54/ultrascan3/commit/67a4d242dabc14876d9354b93434c818b5baf7ec
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M gui/us_spectrodata.cpp
Log Message:
-----------
in the setRaster function, if xrng becomes 0, xinc becomes INF. The same approach for xrng is applied here.
Commit: 6f904c41c021e36595b930817137f19ef8ccce19
https://github.com/ehb54/ultrascan3/commit/6f904c41c021e36595b930817137f19ef8ccce19
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
connect the replot_data function to the pb_refresh
Commit: c24e05faa744af2d76beb4c61148bc79fa771670
https://github.com/ehb54/ultrascan3/commit/c24e05faa744af2d76beb4c61148bc79fa771670
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
fixed the issue with draw bins manually
Commit: 959da46aacd3efb25d3f0a0009e3da52819f733b
https://github.com/ehb54/ultrascan3/commit/959da46aacd3efb25d3f0a0009e3da52819f733b
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_822_pseudo3d_plot
Commit: 32feaefb494d632b390d9acb54c6daefdd47089b
https://github.com/ehb54/ultrascan3/commit/32feaefb494d632b390d9acb54c6daefdd47089b
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-13 (Sat, 13 Jun 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
set range of ct by data
Commit: 9c70967b72e22425120bb3e0971e49e2cab828a2
https://github.com/ehb54/ultrascan3/commit/9c70967b72e22425120bb3e0971e49e2cab828a2
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M gui/us_select_item.cpp
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t870_buffer
Commit: 0678091c6b8ea3a347d8bda5c1f8887a6d3ee65b
https://github.com/ehb54/ultrascan3/commit/0678091c6b8ea3a347d8bda5c1f8887a6d3ee65b
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
Log Message:
-----------
Merge pull request #433 from samo38/t870_buffer
Add buffer manual state to the Buffer and Solution GUI
Commit: 075459dfc9537700e37aba51b3f8a5bb57c3c1c6
https://github.com/ehb54/ultrascan3/commit/075459dfc9537700e37aba51b3f8a5bb57c3c1c6
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_select_item.cpp
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into t842_gaplot
Commit: 16547f24596d6f1a1c6e10976383ed8bc2b74819
https://github.com/ehb54/ultrascan3/commit/16547f24596d6f1a1c6e10976383ed8bc2b74819
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M gui/us_spectrodata.cpp
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
Merge pull request #425 from samo38/t842_gaplot
ticket 842: GA plot range issue
Commit: a7cbce78277c83da3570ae8b311270ecf88d59a5
https://github.com/ehb54/ultrascan3/commit/a7cbce78277c83da3570ae8b311270ecf88d59a5
Author: Saeed <saeed.mortezazadeh25 at gmail.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M gui/us_spectrodata.cpp
M programs/us_ga_init/us_ga_init.cpp
Log Message:
-----------
Merge remote-tracking branch 'upstream/main' into ticket_822_pseudo3d_plot
Commit: c7efd6ac8d78505ee8782507280e4a224fd9e858
https://github.com/ehb54/ultrascan3/commit/c7efd6ac8d78505ee8782507280e4a224fd9e858
Author: Saeed Mortezazadeh <49119048+samo38 at users.noreply.github.com>
Date: 2026-06-14 (Sun, 14 Jun 2026)
Changed paths:
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Merge pull request #423 from samo38/ticket_822_pseudo3d_plot
ticket_822: us_pseudo3d_combine manually diffusion plotting issue
Commit: 1eb5f81fa55c76e1991446dfaaafd472f62ff46f
https://github.com/ehb54/ultrascan3/commit/1eb5f81fa55c76e1991446dfaaafd472f62ff46f
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-15 (Mon, 15 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
[1]GMP: dataDisk -- disable all upcoming tabs in 1. EXP settings when dataDisk option clicked; unlock only when valid .auc data-from-disk uploaded & downstream protocol parameters are generated; correct behavior for Next/Previous lower buttons: disable Next when at 2. Lab/Rotor tab, enable when back to 1. General; disable when back to 2. Lab/Rorot ...
Commit: 8285d5c355b2c8730c274762fd27522a30d3cd18
https://github.com/ehb54/ultrascan3/commit/8285d5c355b2c8730c274762fd27522a30d3cd18
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-15 (Mon, 15 Jun 2026)
Changed paths:
M programs/us_experiment/us_exp_utils.cpp
Log Message:
-----------
[2: select Project, do not enable tabs]GMP: dataDisk -- disable all upcoming tabs in 1. EXP settings when dataDisk option clicked; unlock only when valid .auc data-from-disk uploaded & downstream protocol parameters are generated; correct behavior for Next/Previous lower buttons: disable Next when at 2. Lab/Rotor tab, enable when back to 1. General; disable when back to 2. Lab/Rorot ...
Commit: 245d4309e28c9db90cffbef3cb981c97b69a9b4a
https://github.com/ehb54/ultrascan3/commit/245d4309e28c9db90cffbef3cb981c97b69a9b4a
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-15 (Mon, 15 Jun 2026)
Changed paths:
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M gui/us_spectrodata.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
Log Message:
-----------
Merge branch 'main' into alexey-dev-issue891
Commit: 7870bc0e407e502ff7e3dac5490ba89f35c0a24b
https://github.com/ehb54/ultrascan3/commit/7870bc0e407e502ff7e3dac5490ba89f35c0a24b
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-15 (Mon, 15 Jun 2026)
Changed paths:
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
Log Message:
-----------
Merge pull request #440 from ehb54/alexey-dev-issue891
GMP: dataDisk -- disable all upcoming tabs in 1. EXP settings when dataDisk selected to prevent user-filled protocol creation
Commit: 04bc610b180db0057d777dd09625732e535d15d1
https://github.com/ehb54/ultrascan3/commit/04bc610b180db0057d777dd09625732e535d15d1
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
Protocol-Developer: remove v.0,1 from the window title ...
Commit: aabf6395ab17f75fe98ee8a1856d0df8163ac5a0
https://github.com/ehb54/ultrascan3/commit/aabf6395ab17f75fe98ee8a1856d0df8163ac5a0
Author: alexsav815 <alexsav.science at gmail.com>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
Log Message:
-----------
Merge pull request #442 from ehb54/alexey-dev-issue890
Protocol-Developer: remove v.0,1 from the window title ...
Commit: c01e1313f848d52ba4e9f5c91129eac8c54f2b4d
https://github.com/ehb54/ultrascan3/commit/c01e1313f848d52ba4e9f5c91129eac8c54f2b4d
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M .github/workflows/bump-version.yml
Log Message:
-----------
fix: Update bump PR commit SHA in workflow configuration
Commit: 52cc7dc3a6bb04f611fd929cf3e9a34d8ff69e1c
https://github.com/ehb54/ultrascan3/commit/52cc7dc3a6bb04f611fd929cf3e9a34d8ff69e1c
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M .github/workflows/bump-version.yml
Log Message:
-----------
Merge pull request #444 from ehb54/898-update-bump-pr-commit-sha-ultrascan3
Update workflow configuration for commit SHA bump
Commit: e7fc39e0ded8d0a6cfe774a4c39f42f3e26ec5c2
https://github.com/ehb54/ultrascan3/commit/e7fc39e0ded8d0a6cfe774a4c39f42f3e26ec5c2
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M gui/libus_gui.pro
M local.pri.template
Log Message:
-----------
Fix macx build: guard -lqwtplot3d self-link and add -lus_utils to libus_gui
local.pri.template: split -lqwtplot3d onto a guarded line so that
when qwtplot3d itself is being built it does not try to link against
its own not-yet-existing library (ld: library not found for -lqwtplot3d).
gui/libus_gui.pro: add macx LIBS += -lus_utils so that the symbols
moved into libus_gui in Nov 2025 (us_csv_loader, us_convert_gui,
us_extinction_gui, etc.) can resolve against libus_utils at link time.
Co-Authored-By: Claude Sonnet 4.6 <noreply at anthropic.com>
Commit: c81d8b70460860507d201fd8243784999eddf69b
https://github.com/ehb54/ultrascan3/commit/c81d8b70460860507d201fd8243784999eddf69b
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-16 (Tue, 16 Jun 2026)
Changed paths:
M .github/workflows/bump-version.yml
Log Message:
-----------
Merge branch 'main' into ehb54-issue-907
Commit: 36f036553bd505b52b7b696575355f3d715ab159
https://github.com/ehb54/ultrascan3/commit/36f036553bd505b52b7b696575355f3d715ab159
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M gui/libus_gui.pro
M local.pri.template
Log Message:
-----------
Merge pull request #446 from ehb54/ehb54-issue-907
Fix macx build: guard -lqwtplot3d self-link and add -lus_utils to libus_gui
Commit: c7fe1d915db484906fa21f7fdb059dd46ca14e3d
https://github.com/ehb54/ultrascan3/commit/c7fe1d915db484906fa21f7fdb059dd46ca14e3d
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
R doc/manual/source/__pycache__/auto_index.cpython-39.pyc
Log Message:
-----------
Delete doc/manual/source/__pycache__/auto_index.cpython-39.pyc
Commit: 8ed782c9a9b80ae3e81e35cfb88056da7f66986b
https://github.com/ehb54/ultrascan3/commit/8ed782c9a9b80ae3e81e35cfb88056da7f66986b
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M .gitignore
Log Message:
-----------
Add Python bytecode files to .gitignore
Commit: 02b1998e8c4e4190087e112ea223ffc452d892c1
https://github.com/ehb54/ultrascan3/commit/02b1998e8c4e4190087e112ea223ffc452d892c1
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M .gitignore
R doc/manual/source/__pycache__/auto_index.cpython-39.pyc
Log Message:
-----------
Merge pull request #447 from ehb54/ehb54-issue-908
Remove Python bytecode files and update .gitignore
Commit: 2b7ce8e951545aceafde79228ff691ba4b5b2961
https://github.com/ehb54/ultrascan3/commit/2b7ce8e951545aceafde79228ff691ba4b5b2961
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M programs/us/revision.sh
Log Message:
-----------
revision.sh: limit Δ marker to source code file changes only
Previously git diff checked all tracked files, causing the LOCAL_CHANGES
Δ symbol to appear whenever build scripts, .pri files, or other non-source
files differed from upstream — including during normal packaging builds.
Restrict the check to file types that produce compiled output:
*.h, *.cpp, *.ui (Qt Designer), *.qrc (Qt resources).
Co-Authored-By: Claude Sonnet 4.6 <noreply at anthropic.com>
Commit: a1bf5d7f2eb4649cd5167b42db38d5c6e4aa4d0d
https://github.com/ehb54/ultrascan3/commit/a1bf5d7f2eb4649cd5167b42db38d5c6e4aa4d0d
Author: ehb54 <brookes at uthscsa.edu>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M programs/us/revision.sh
Log Message:
-----------
revision.sh: fix pathspec scope for source-file delta check
git diff pathspecs with bare globs (*.h) only match within the current
directory, not repo-wide. Since the script cd's to programs/us/, the
check was missing changes in gui/, utils/, etc.
Fix by running git -C from the repo root so all subdirectories are covered.
Co-Authored-By: Claude Sonnet 4.6 <noreply at anthropic.com>
Commit: 325d0cbff2d496aaf6a42add91e63d096b0e9d26
https://github.com/ehb54/ultrascan3/commit/325d0cbff2d496aaf6a42add91e63d096b0e9d26
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M .gitignore
R doc/manual/source/__pycache__/auto_index.cpython-39.pyc
Log Message:
-----------
Merge branch 'main' into ehb54-issue-909
Commit: c4a785babca12aa43bf7f624928fa31cf97da1f4
https://github.com/ehb54/ultrascan3/commit/c4a785babca12aa43bf7f624928fa31cf97da1f4
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-17 (Wed, 17 Jun 2026)
Changed paths:
M programs/us/revision.sh
Log Message:
-----------
Merge pull request #448 from ehb54/ehb54-issue-909
revision.sh: limit Δ marker to source code file changes only
Commit: 45ef026ad65a694d99671bd358216a9d7f7330d3
https://github.com/ehb54/ultrascan3/commit/45ef026ad65a694d99671bd358216a9d7f7330d3
Author: emre brookes <ehb54 at users.noreply.github.com>
Date: 2026-06-18 (Thu, 18 Jun 2026)
Changed paths:
A .github/gtest-us.json
M .github/workflows/bump-version.yml
M .github/workflows/doc-build.yml
A .github/workflows/sphinx-doc-build.yml
M .github/workflows/unit-tests-v2.yml
R .github/workflows/unit-tests.yml
M .gitignore
M CMakeLists.txt
M CMakePresets.json
M LICENSE.txt
R README.linguist
M README.manual
M admin/cmake/GenerateVersion.cmake
A admin/cmake/README.md
A admin/cmake/packaging/README.md
A admin/cmake/packaging/linux/LinuxDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
A admin/cmake/packaging/linux/LinuxHpcPkg.cmake
A admin/cmake/packaging/linux/LinuxPkg.cmake
A admin/cmake/packaging/macos/MacDeploy.cmake
A admin/cmake/packaging/macos/MacHpcDeploy.cmake
A admin/cmake/packaging/macos/MacHpcPkg.cmake
A admin/cmake/packaging/macos/MacOsDeployQtAssistant.cmake
A admin/cmake/packaging/macos/MacOsPkg.cmake
A admin/cmake/packaging/macos/StageAssistantDev.cmake
A admin/cmake/packaging/windows/WinDeploy.cmake
A admin/cmake/packaging/windows/WinPkg.cmake
A admin/cmake/packaging/windows/WindowsDeployQtAssistant.cmake
M admin/cmake/toolchain.cmake
A buildsys/vcpkg/overlay-ports/mpg123/fix-arm64-no-fpu-neon64.patch
A buildsys/vcpkg/overlay-ports/mpg123/have-fpu.diff
A buildsys/vcpkg/overlay-ports/mpg123/pkgconfig.diff
A buildsys/vcpkg/overlay-ports/mpg123/portfile.cmake
A buildsys/vcpkg/overlay-ports/mpg123/vcpkg.json
M buildsys/vcpkg/overlay-ports/qt5-tools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/devendor-litehtml.patch
A buildsys/vcpkg/overlay-ports/qttools/port.data.cmake
A buildsys/vcpkg/overlay-ports/qttools/portfile.cmake
A buildsys/vcpkg/overlay-ports/qttools/vcpkg.json
A buildsys/vcpkg/overlay-ports/qttools/windeployqt.debug.bat
M buildsys/vcpkg/overlay-ports/qwt-6-3-0-qt6/portfile.cmake
R doc/manual/2dsa/2dsa.body
R doc/manual/2dsa/2dsa_advan.body
R doc/manual/2dsa/2dsa_analvv.body
R doc/manual/2dsa/2dsa_analys.body
M doc/manual/CMakeLists.txt
M doc/manual/Makefile
M doc/manual/README.md
R doc/manual/advanced_config.body
R doc/manual/analytes.body
R doc/manual/associations.body
R doc/manual/astfem_sim.body
R doc/manual/buffer_edit.body
R doc/manual/buffer_new.body
R doc/manual/buffer_select.body
R doc/manual/buffer_settings.body
R doc/manual/cfa_viewer.body
R doc/manual/colorgradient.body
R doc/manual/combine_models.body
R doc/manual/components.body
R doc/manual/config.body
R doc/manual/config2.body
R doc/manual/convert-experiment.body
R doc/manual/convert-seltrip.body
R doc/manual/convert.body
R doc/manual/data_loader.body
R doc/manual/database_config.body
R doc/manual/ddist_combine.body
R doc/manual/dens_match.body
R doc/manual/dens_match_mparam.body
R doc/manual/dens_match_rmvmods.body
R doc/manual/experiment/experiment_cells.body
R doc/manual/experiment/experiment_general.body
R doc/manual/experiment/experiment_photomult.body
R doc/manual/experiment/experiment_rotor.body
R doc/manual/experiment/experiment_solutions.body
R doc/manual/experiment/experiment_speeds.body
R doc/manual/experiment/experiment_upload.body
R doc/manual/export_legacy.body
R doc/manual/fe_match/fe_match.body
R doc/manual/fe_match/fe_match_adv.body
R doc/manual/fe_match/fe_match_controls.body
R doc/manual/fe_match/fe_match_lddat.body
R doc/manual/fe_match/fe_match_simulate.body
R doc/manual/fit_meniscus.body
R doc/manual/footer.us3
R doc/manual/ga_initialize.body
R doc/manual/gmp/gmp.body
R doc/manual/gmp/gmp_audit_trail.body
R doc/manual/gmp/gmp_data_acquisition.body
R doc/manual/gmp/gmp_data_acquisition_experiment.body
R doc/manual/gmp/gmp_data_acquisition_gmp.body
R doc/manual/gmp/gmp_protocol_development.body
R doc/manual/gmp/gmp_report_generator.body
R doc/manual/gmp/gmp_signature.body
R doc/manual/grid_editor.body
R doc/manual/header.us3
R doc/manual/images/2dsa_3dplot.png
R doc/manual/images/2dsa_advan.png
R doc/manual/images/2dsa_analvv.png
R doc/manual/images/2dsa_analys.png
R doc/manual/images/2dsa_main-c.png
R doc/manual/images/2dsa_main-o.png
R doc/manual/images/2dsa_resplot.png
R doc/manual/images/advanced_config.png
R doc/manual/images/analyte_details.png
R doc/manual/images/analytes.png
R doc/manual/images/associations.png
R doc/manual/images/astfem_sim.png
R doc/manual/images/buffer_edit.png
R doc/manual/images/buffer_info.png
R doc/manual/images/buffer_new.png
R doc/manual/images/buffer_select.png
R doc/manual/images/buffer_settings.png
R doc/manual/images/cfa_view-loadauc.png
R doc/manual/images/cfa_view-loadraw.png
R doc/manual/images/cfa_view-main.png
R doc/manual/images/cfa_view-statsauc.png
R doc/manual/images/cfa_view-statsraw.png
R doc/manual/images/color-1.png
R doc/manual/images/color-2.png
R doc/manual/images/color-a.png
R doc/manual/images/color-b.png
R doc/manual/images/colorgrad.png
R doc/manual/images/colorgrad1.png
R doc/manual/images/combine_models-idedit.png
R doc/manual/images/combine_models-save.png
R doc/manual/images/combine_models.png
R doc/manual/images/components.png
R doc/manual/images/config.png
R doc/manual/images/config1.png
R doc/manual/images/config2.png
R doc/manual/images/convert-RIdata.png
R doc/manual/images/convert-exclude.png
R doc/manual/images/convert-experiment.png
R doc/manual/images/convert-mwl.png
R doc/manual/images/convert-seltrip.png
R doc/manual/images/convert-subset.png
R doc/manual/images/convert-tolerance.png
R doc/manual/images/convert.png
R doc/manual/images/data_loader-edits.png
R doc/manual/images/data_loader-trips.png
R doc/manual/images/data_loader.png
R doc/manual/images/database.png
R doc/manual/images/ddist_combine-selrun.png
R doc/manual/images/ddist_combine.png
R doc/manual/images/densmatch_main.png
R doc/manual/images/densmatch_mpars_completed.png
R doc/manual/images/densmatch_mpars_empty.png
R doc/manual/images/densmatch_rmvmodels.png
R doc/manual/images/eq1-mean.png
R doc/manual/images/eq2-skew.png
R doc/manual/images/eq3-kurtosis.png
R doc/manual/images/eq4-moments.png
R doc/manual/images/eq5-variance.png
R doc/manual/images/eq6-stddev.png
R doc/manual/images/eq7-probsigma.png
R doc/manual/images/eq8-confidence.png
R doc/manual/images/experiment_cells.png
R doc/manual/images/experiment_general.png
R doc/manual/images/experiment_photomult.png
R doc/manual/images/experiment_rotor.png
R doc/manual/images/experiment_solutions.png
R doc/manual/images/experiment_speeds.png
R doc/manual/images/experiment_upload.png
R doc/manual/images/export_legacy.png
R doc/manual/images/fe_match.png
R doc/manual/images/fe_match_3dplot.png
R doc/manual/images/fe_match_adv.png
R doc/manual/images/fe_match_lddat1.png
R doc/manual/images/fe_match_lddat2.png
R doc/manual/images/fe_match_lddat3.png
R doc/manual/images/fe_match_lddat4.png
R doc/manual/images/fe_match_ra.png
R doc/manual/images/fe_match_resplot.png
R doc/manual/images/fe_match_sim1.png
R doc/manual/images/fe_match_sim2.png
R doc/manual/images/fe_match_sim3_1b.png
R doc/manual/images/fe_match_sim3_1p.png
R doc/manual/images/fe_match_sim3_2b.png
R doc/manual/images/fe_match_sim3_2p.png
R doc/manual/images/fe_match_sim3_3b.png
R doc/manual/images/fe_match_sim3_4b.png
R doc/manual/images/fe_match_sim3_5b.png
R doc/manual/images/fe_match_sim3_5p.png
R doc/manual/images/fe_match_sim3_6b.png
R doc/manual/images/fe_match_sim3_7b.png
R doc/manual/images/fe_match_sim3_8b.png
R doc/manual/images/fe_match_sim4.png
R doc/manual/images/fe_match_sim5.png
R doc/manual/images/fe_match_sim6.png
R doc/manual/images/fe_match_sim7.png
R doc/manual/images/fit_men-editupd.png
R doc/manual/images/fit_men-load.png
R doc/manual/images/fit_meniscus.png
R doc/manual/images/ga_initialize.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_01.png
R doc/manual/images/gmp/audit_trail/gmp_audit_trail_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
R doc/manual/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
R doc/manual/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_01.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_02.png
R doc/manual/images/gmp/data_acquisition/gmp_data_acquisition_03.png
R doc/manual/images/gmp/gmp.png
R doc/manual/images/gmp/protocol_development/protocol_development_01.png
R doc/manual/images/gmp/protocol_development/protocol_development_02.png
R doc/manual/images/gmp/protocol_development/protocol_development_03.png
R doc/manual/images/gmp/protocol_development/protocol_development_04.png
R doc/manual/images/gmp/protocol_development/protocol_development_05.png
R doc/manual/images/gmp/protocol_development/protocol_development_06.png
R doc/manual/images/gmp/protocol_development/protocol_development_07.png
R doc/manual/images/gmp/protocol_development/protocol_development_08.png
R doc/manual/images/gmp/protocol_development/protocol_development_09.png
R doc/manual/images/gmp/protocol_development/protocol_development_10.png
R doc/manual/images/gmp/protocol_development/protocol_development_11.png
R doc/manual/images/gmp/protocol_development/protocol_development_12.png
R doc/manual/images/gmp/protocol_development/protocol_development_13.png
R doc/manual/images/gmp/protocol_development/protocol_development_14.png
R doc/manual/images/gmp/protocol_development/protocol_development_15.png
R doc/manual/images/gmp/protocol_development/protocol_development_16.png
R doc/manual/images/gmp/protocol_development/protocol_development_17.png
R doc/manual/images/gmp/protocol_development/protocol_development_18.png
R doc/manual/images/gmp/protocol_development/protocol_development_19.png
R doc/manual/images/gmp/protocol_development/protocol_development_20.png
R doc/manual/images/gmp/protocol_development/protocol_development_21.png
R doc/manual/images/gmp/protocol_development/protocol_development_22.png
R doc/manual/images/gmp/protocol_development/protocol_development_23.png
R doc/manual/images/gmp/protocol_development/protocol_development_24.png
R doc/manual/images/gmp/protocol_development/protocol_development_25.png
R doc/manual/images/gmp/protocol_development/protocol_development_26.png
R doc/manual/images/gmp/protocol_development/protocol_development_27.png
R doc/manual/images/gmp/protocol_development/protocol_development_28.png
R doc/manual/images/gmp/protocol_development/protocol_development_29.png
R doc/manual/images/gmp/protocol_development/protocol_development_30.png
R doc/manual/images/gmp/protocol_development/protocol_development_31.png
R doc/manual/images/gmp/protocol_development/protocol_development_32.png
R doc/manual/images/gmp/protocol_development/protocol_development_33.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_01.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_02.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_03.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_04.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_05.png
R doc/manual/images/gmp/report_generator/gmp_report_generator_06.png
R doc/manual/images/gmp/signature/gmp_signature_01.png
R doc/manual/images/gmp/signature/gmp_signature_02.png
R doc/manual/images/gmp/signature/gmp_signature_03.png
R doc/manual/images/gmp/signature/gmp_signature_04.png
R doc/manual/images/gmp/signature/gmp_signature_05.png
R doc/manual/images/gmp/signature/gmp_signature_06.png
R doc/manual/images/gmp/signature/gmp_signature_07.png
R doc/manual/images/gmp/signature/gmp_signature_08.png
R doc/manual/images/grid_editor.png
R doc/manual/images/grid_editor_multi_grids.png
R doc/manual/images/grid_editor_multi_grids_sed.png
R doc/manual/images/grid_editor_mw_view.png
R doc/manual/images/grid_editor_subgrid1-bad.png
R doc/manual/images/grid_editor_subgrid1-good.png
R doc/manual/images/grid_editor_subgrid2-bad.png
R doc/manual/images/grid_editor_subgrid2-good.png
R doc/manual/images/grid_editor_subgrid3-bad.png
R doc/manual/images/grid_editor_subgrid3-good.png
R doc/manual/images/load_auc-search.png
R doc/manual/images/load_auc-trips.png
R doc/manual/images/load_auc.png
R doc/manual/images/load_colormap.png
R doc/manual/images/load_model_dis-MID.png
R doc/manual/images/load_model_distrib.png
R doc/manual/images/load_noise.png
R doc/manual/images/load_noise_details.png
R doc/manual/images/manage_data.png
R doc/manual/images/manage_data_bhide.png
R doc/manual/images/manage_data_bshow.png
R doc/manual/images/manage_data_cmenu-1.png
R doc/manual/images/manage_data_cmenu-2.png
R doc/manual/images/manage_data_conf.png
R doc/manual/images/manage_data_exp.png
R doc/manual/images/manage_data_pasw.png
R doc/manual/images/manage_data_sync.png
R doc/manual/images/manage_data_thelp-1.png
R doc/manual/images/manage_data_thelp-2.png
R doc/manual/images/master-pw.png
R doc/manual/images/model_editor.png
R doc/manual/images/mwlr_view_3dplot.png
R doc/manual/images/mwlr_view_load.png
R doc/manual/images/mwlr_view_pltctrl.png
R doc/manual/images/mwlr_viewer.png
R doc/manual/images/mwlr_viewer_xwavl.png
R doc/manual/images/optima_config_edit.png
R doc/manual/images/optima_config_new.png
R doc/manual/images/optima_host_config.png
R doc/manual/images/pcsa_3dplot.png
R doc/manual/images/pcsa_analys-line.png
R doc/manual/images/pcsa_analys-sigm.png
R doc/manual/images/pcsa_main-c.png
R doc/manual/images/pcsa_mlines-line1.png
R doc/manual/images/pcsa_mlines-line2.png
R doc/manual/images/pcsa_mlines-sigm1.png
R doc/manual/images/pcsa_mlines-sigm2.png
R doc/manual/images/pcsa_resplot.png
R doc/manual/images/pcsa_rpscan-auto.png
R doc/manual/images/pcsa_rpscan-select.png
R doc/manual/images/predict1.png
R doc/manual/images/predict2-1.png
R doc/manual/images/pseudo3d_comb_rmv.png
R doc/manual/images/pseudo3d_combine.png
R doc/manual/images/register.png
R doc/manual/images/reporter-cmenu.png
R doc/manual/images/reporter-details.png
R doc/manual/images/reporter-loadprof.png
R doc/manual/images/reporter-save.png
R doc/manual/images/reporter-saveprof.png
R doc/manual/images/reporter-view.png
R doc/manual/images/reporter-viewitem.png
R doc/manual/images/reporter.png
R doc/manual/images/rotor-add.png
R doc/manual/images/rotor-save-calibration.png
R doc/manual/images/rotor.png
R doc/manual/images/rotorstretch-0.png
R doc/manual/images/rotorstretch-1.png
R doc/manual/images/rotorstretch-2.png
R doc/manual/images/rotorstretch-3.png
R doc/manual/images/rotorstretch-4.png
R doc/manual/images/rotorstretch-5.png
R doc/manual/images/rotorstretch-6.png
R doc/manual/images/rotorstretch-7.png
R doc/manual/images/sassoc/sassoc_01.png
R doc/manual/images/sassoc/sassoc_02.png
R doc/manual/images/save_colormap.png
R doc/manual/images/second_moment.png
R doc/manual/images/select_edits.png
R doc/manual/images/select_runs.png
R doc/manual/images/sequence.png
R doc/manual/images/simparams.png
R doc/manual/images/somo/somo_icon.png
R doc/manual/images/time_derivative.png
R doc/manual/images/ultra.xpm
R doc/manual/images/ultrascan3.png
R doc/manual/images/us_buffer.png
R doc/manual/images/us_buffer_spect.png
R doc/manual/images/us_convert/us_convert_01.png
R doc/manual/images/us_convert/us_convert_02.png
R doc/manual/images/us_convert/us_convert_03.png
R doc/manual/images/us_convert/us_convert_04.png
R doc/manual/images/us_convert/us_convert_05.png
R doc/manual/images/us_convert/us_convert_06.png
R doc/manual/images/us_convert/us_convert_07.png
R doc/manual/images/us_convert/us_convert_08.png
R doc/manual/images/us_convert/us_convert_09.png
R doc/manual/images/us_convert/us_convert_10.png
R doc/manual/images/us_convert/us_convert_11.png
R doc/manual/images/us_convert/us_convert_12.png
R doc/manual/images/us_convert/us_convert_13.png
R doc/manual/images/us_convert/us_convert_14.png
R doc/manual/images/us_edit.png
R doc/manual/images/us_edit_mwl.png
R doc/manual/images/us_equiltime.png
R doc/manual/images/us_fds_filemanager-0.png
R doc/manual/images/us_fds_filemanager-1.png
R doc/manual/images/us_fds_filemanager-2.png
R doc/manual/images/us_fds_filemanager-3.png
R doc/manual/images/us_fds_filemanager-4.png
R doc/manual/images/us_investigator-2.png
R doc/manual/images/us_investigator.png
R doc/manual/images/us_modelmetrics-0.png
R doc/manual/images/us_project1.png
R doc/manual/images/us_project2.png
R doc/manual/images/us_project3.png
R doc/manual/images/us_solution1.png
R doc/manual/images/us_solution2.png
R doc/manual/images/us_solution3.png
R doc/manual/images/usfont-1.png
R doc/manual/images/usfont-2.png
R doc/manual/images/vhw_combine-combo.png
R doc/manual/images/vhw_combine-envel.png
R doc/manual/images/vhw_combine-selrun.png
R doc/manual/images/vhw_combine.png
R doc/manual/images/vhw_distribution.png
R doc/manual/images/vhw_enh_groups.png
R doc/manual/images/vhw_enhanced.png
R doc/manual/images/vhw_histogram.png
R doc/manual/index.body
R doc/manual/load/load_auc.body
R doc/manual/load/load_colormap.body
R doc/manual/load/load_model_dis-MID.body
R doc/manual/load/load_model_distrib.body
R doc/manual/load/load_noise.body
R doc/manual/load/load_noise_details.body
R doc/manual/mainstyle.css
R doc/manual/make-docs.sh
R doc/manual/make-html.sh
R doc/manual/make-qdocs.sh
R doc/manual/make-wraps.sh
R doc/manual/manage_data.body
R doc/manual/manage_data_cmenu.body
R doc/manual/manage_data_thelp.body
R doc/manual/manual.qhcp
R doc/manual/manual.qhp
R doc/manual/master_pw.body
R doc/manual/model_editor.body
R doc/manual/mwlr_view_load.body
R doc/manual/mwlr_view_pltctrl.body
R doc/manual/mwlr_viewer.body
R doc/manual/optima_host_config.body
R doc/manual/pcsa.body
R doc/manual/pcsa_analys.body
R doc/manual/pcsa_mlines.body
R doc/manual/pcsa_rpscan.body
R doc/manual/predict1.body
R doc/manual/predict2.body
R doc/manual/pseudo3d_comb_rmv.body
R doc/manual/pseudo3d_combine.body
R doc/manual/register.body
R doc/manual/reporter.body
R doc/manual/rotor.body
R doc/manual/rotorstretch.body
R doc/manual/sassoc.body
R doc/manual/save_colormap.body
R doc/manual/second_moment.body
R doc/manual/select_edits.body
R doc/manual/select_runs.body
R doc/manual/simparams.body
R doc/manual/somo.body
A doc/manual/source/2dsa/2dsa_adv.rst
A doc/manual/source/2dsa/2dsa_analys.rst
A doc/manual/source/2dsa/2dsa_main.rst
A doc/manual/source/2dsa/index.rst
A doc/manual/source/3000_rpm.rst
A doc/manual/source/3d_plot.rst
A doc/manual/source/_static/UltraScanIII.pdf
A doc/manual/source/_static/custom.css
A doc/manual/source/_static/images/2dsa_3dplot.png
A doc/manual/source/_static/images/2dsa_advan.png
A doc/manual/source/_static/images/2dsa_analvv.png
A doc/manual/source/_static/images/2dsa_analys.png
A doc/manual/source/_static/images/2dsa_main-c.png
A doc/manual/source/_static/images/2dsa_main-o.png
A doc/manual/source/_static/images/2dsa_resplot.png
A doc/manual/source/_static/images/D20W_bar.png
A doc/manual/source/_static/images/MW-bar.png
A doc/manual/source/_static/images/RINplot.png
A doc/manual/source/_static/images/TINplot.png
A doc/manual/source/_static/images/UltraScan-logo.png
A doc/manual/source/_static/images/abde-1.png
A doc/manual/source/_static/images/add_RIN-TIN.png
A doc/manual/source/_static/images/add_RIN.png
A doc/manual/source/_static/images/add_TIN.png
A doc/manual/source/_static/images/advanced_config.png
A doc/manual/source/_static/images/analyte_details.png
A doc/manual/source/_static/images/analyte_edit.png
A doc/manual/source/_static/images/analyte_edit_spec.png
A doc/manual/source/_static/images/analyte_new_sequence.png
A doc/manual/source/_static/images/analyte_newc.png
A doc/manual/source/_static/images/analyte_newd.png
A doc/manual/source/_static/images/analyte_newp.png
A doc/manual/source/_static/images/analyte_selectc.png
A doc/manual/source/_static/images/analyte_selectd.png
A doc/manual/source/_static/images/analyte_selectp.png
A doc/manual/source/_static/images/analyte_sequence.png
A doc/manual/source/_static/images/analyte_settings.png
A doc/manual/source/_static/images/analyte_spec-gui.png
A doc/manual/source/_static/images/analyte_specmenu.png
A doc/manual/source/_static/images/analyte_spectrum.png
A doc/manual/source/_static/images/analytes.png
A doc/manual/source/_static/images/associations.png
A doc/manual/source/_static/images/astfem_sim.png
A doc/manual/source/_static/images/bad_grid.png
A doc/manual/source/_static/images/beck_convert-2.png
A doc/manual/source/_static/images/beck_converter.png
A doc/manual/source/_static/images/bitmap.png
A doc/manual/source/_static/images/buffer_edit.png
A doc/manual/source/_static/images/buffer_edit_setting.png
A doc/manual/source/_static/images/buffer_edit_spectrum.png
A doc/manual/source/_static/images/buffer_info.png
A doc/manual/source/_static/images/buffer_manage_spectrum.png
A doc/manual/source/_static/images/buffer_new.png
A doc/manual/source/_static/images/buffer_new_spectrum.png
A doc/manual/source/_static/images/buffer_select.png
A doc/manual/source/_static/images/buffer_settings.png
A doc/manual/source/_static/images/buffer_spectrum.png
A doc/manual/source/_static/images/cfa_view-loadauc.png
A doc/manual/source/_static/images/cfa_view-loadraw.png
A doc/manual/source/_static/images/cfa_view-main.png
A doc/manual/source/_static/images/cfa_view-statsauc.png
A doc/manual/source/_static/images/cfa_view-statsraw.png
A doc/manual/source/_static/images/cmenu_help.png
A doc/manual/source/_static/images/color-1.png
A doc/manual/source/_static/images/color-2.png
A doc/manual/source/_static/images/color-a.png
A doc/manual/source/_static/images/color-b.png
A doc/manual/source/_static/images/colorgrad1.png
A doc/manual/source/_static/images/colorgradient/col1_colgen.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_Fe_match.png
A doc/manual/source/_static/images/colorgradient/col1_colgen_GA.png
A doc/manual/source/_static/images/colorgradient/col2_colgen.png
A doc/manual/source/_static/images/colorgradient/colorgrad.png
A doc/manual/source/_static/images/colorgradient/colorgradient_main.png
A doc/manual/source/_static/images/colorgradient/components.png
A doc/manual/source/_static/images/colorgradient/model_editor.png
A doc/manual/source/_static/images/combine_models-idedit.png
A doc/manual/source/_static/images/combine_models-save.png
A doc/manual/source/_static/images/combine_models.png
A doc/manual/source/_static/images/components.png
A doc/manual/source/_static/images/config.png
A doc/manual/source/_static/images/config1.png
A doc/manual/source/_static/images/config2.png
A doc/manual/source/_static/images/config_plot.png
A doc/manual/source/_static/images/convert-RIdata.png
A doc/manual/source/_static/images/convert-exclude.png
A doc/manual/source/_static/images/convert-experiment.png
A doc/manual/source/_static/images/convert-mwl.png
A doc/manual/source/_static/images/convert-seltrip.png
A doc/manual/source/_static/images/convert-subset.png
A doc/manual/source/_static/images/convert-tolerance.png
A doc/manual/source/_static/images/convert.png
A doc/manual/source/_static/images/custom_grid-1.png
A doc/manual/source/_static/images/custom_grid.png
A doc/manual/source/_static/images/data_converter.png
A doc/manual/source/_static/images/data_loader-edits.png
A doc/manual/source/_static/images/data_loader-trips.png
A doc/manual/source/_static/images/data_loader.png
A doc/manual/source/_static/images/database.png
A doc/manual/source/_static/images/ddist_combine-selrun.png
A doc/manual/source/_static/images/ddist_combine.png
A doc/manual/source/_static/images/delseltrip.png
A doc/manual/source/_static/images/densmatch_main.png
A doc/manual/source/_static/images/densmatch_mpars_completed.png
A doc/manual/source/_static/images/densmatch_mpars_empty.png
A doc/manual/source/_static/images/densmatch_rmvmodels.png
A doc/manual/source/_static/images/dmga-save.png
A doc/manual/source/_static/images/dmga.png
A doc/manual/source/_static/images/dmga_constr.png
A doc/manual/source/_static/images/edit_buffer_spec_menu.png
A doc/manual/source/_static/images/edit_exclude_scan.png
A doc/manual/source/_static/images/edit_scan.png
A doc/manual/source/_static/images/eq1-mean.png
A doc/manual/source/_static/images/eq2-skew.png
A doc/manual/source/_static/images/eq3-kurtosis.png
A doc/manual/source/_static/images/eq4-moments.png
A doc/manual/source/_static/images/eq5-variance.png
A doc/manual/source/_static/images/eq6-stddev.png
A doc/manual/source/_static/images/eq7-probsigma.png
A doc/manual/source/_static/images/eq8-confidence.png
A doc/manual/source/_static/images/experiment_cells.png
A doc/manual/source/_static/images/experiment_edit.png
A doc/manual/source/_static/images/experiment_general.png
A doc/manual/source/_static/images/experiment_import.png
A doc/manual/source/_static/images/experiment_liveupdate.png
A doc/manual/source/_static/images/experiment_liveupdate_run.png
A doc/manual/source/_static/images/experiment_optics.png
A doc/manual/source/_static/images/experiment_overview.png
A doc/manual/source/_static/images/experiment_photomult.png
A doc/manual/source/_static/images/experiment_range.png
A doc/manual/source/_static/images/experiment_range_details.png
A doc/manual/source/_static/images/experiment_range_selector.png
A doc/manual/source/_static/images/experiment_range_selmanual.png
A doc/manual/source/_static/images/experiment_rotor.png
A doc/manual/source/_static/images/experiment_solutions.png
A doc/manual/source/_static/images/experiment_solutions_comments.png
A doc/manual/source/_static/images/experiment_speeds.png
A doc/manual/source/_static/images/experiment_submit.png
A doc/manual/source/_static/images/experiment_submit_details.png
A doc/manual/source/_static/images/experiment_upload.png
A doc/manual/source/_static/images/export_leg_1.png
A doc/manual/source/_static/images/export_leg_RA.png
A doc/manual/source/_static/images/export_leg_RI.png
A doc/manual/source/_static/images/export_leg_auc.png
A doc/manual/source/_static/images/export_leg_beck.png
A doc/manual/source/_static/images/export_legacy.png
A doc/manual/source/_static/images/fe_dmga_adv.png
A doc/manual/source/_static/images/fe_load_data.png
A doc/manual/source/_static/images/fe_load_model_distrib.png
A doc/manual/source/_static/images/fe_match.png
A doc/manual/source/_static/images/fe_match_3dplot.png
A doc/manual/source/_static/images/fe_match_adv.png
A doc/manual/source/_static/images/fe_match_all.png
A doc/manual/source/_static/images/fe_match_allct.png
A doc/manual/source/_static/images/fe_match_lddat1.png
A doc/manual/source/_static/images/fe_match_lddat2.png
A doc/manual/source/_static/images/fe_match_lddat3.png
A doc/manual/source/_static/images/fe_match_lddat4.png
A doc/manual/source/_static/images/fe_match_ra.png
A doc/manual/source/_static/images/fe_match_resplot.png
A doc/manual/source/_static/images/fe_match_sim1.png
A doc/manual/source/_static/images/fe_match_sim2.png
A doc/manual/source/_static/images/fe_match_sim3_1b.png
A doc/manual/source/_static/images/fe_match_sim3_1p.png
A doc/manual/source/_static/images/fe_match_sim3_2b.png
A doc/manual/source/_static/images/fe_match_sim3_2p.png
A doc/manual/source/_static/images/fe_match_sim3_3b.png
A doc/manual/source/_static/images/fe_match_sim3_4b.png
A doc/manual/source/_static/images/fe_match_sim3_5b.png
A doc/manual/source/_static/images/fe_match_sim3_5p.png
A doc/manual/source/_static/images/fe_match_sim3_6b.png
A doc/manual/source/_static/images/fe_match_sim3_7b.png
A doc/manual/source/_static/images/fe_match_sim3_8b.png
A doc/manual/source/_static/images/fe_match_sim4.png
A doc/manual/source/_static/images/fe_match_sim5.png
A doc/manual/source/_static/images/fe_match_sim6.png
A doc/manual/source/_static/images/fe_match_sim7.png
A doc/manual/source/_static/images/fe_match_simulated.png
A doc/manual/source/_static/images/fe_match_viewer.png
A doc/manual/source/_static/images/fe_sim-1.png
A doc/manual/source/_static/images/fe_sim-2.png
A doc/manual/source/_static/images/fit_men-editupd.png
A doc/manual/source/_static/images/fit_men-load.png
A doc/manual/source/_static/images/fit_men_bot.png
A doc/manual/source/_static/images/fit_meniscus.png
A doc/manual/source/_static/images/ga_initialize-o.png
A doc/manual/source/_static/images/ga_initialize-p.png
A doc/manual/source/_static/images/ga_initialize.png
A doc/manual/source/_static/images/ga_report-1.png
A doc/manual/source/_static/images/ga_report-2.png
A doc/manual/source/_static/images/ga_report-3.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_01.png
A doc/manual/source/_static/images/gmp/audit_trail/gmp_audit_trail_02.png
A doc/manual/source/_static/images/gmp/automation/2dsa.png
A doc/manual/source/_static/images/gmp/automation/2dsa_it.png
A doc/manual/source/_static/images/gmp/automation/2dsa_mc.png
A doc/manual/source/_static/images/gmp/automation/Aprofile.png
A doc/manual/source/_static/images/gmp/automation/analysis.png
A doc/manual/source/_static/images/gmp/automation/auto_edit.png
A doc/manual/source/_static/images/gmp/automation/bitmap.png
A doc/manual/source/_static/images/gmp/automation/cells.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rando.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_rin.png
A doc/manual/source/_static/images/gmp/automation/data_viewer_tin.png
A doc/manual/source/_static/images/gmp/automation/lims.png
A doc/manual/source/_static/images/gmp/automation/main_window.png
A doc/manual/source/_static/images/gmp/automation/man_edit.png
A doc/manual/source/_static/images/gmp/automation/optics.png
A doc/manual/source/_static/images/gmp/automation/pcsa.png
A doc/manual/source/_static/images/gmp/automation/pcsa_report.png
A doc/manual/source/_static/images/gmp/automation/plot.png
A doc/manual/source/_static/images/gmp/automation/ranges.png
A doc/manual/source/_static/images/gmp/automation/report_editor.png
A doc/manual/source/_static/images/gmp/automation/rotor.png
A doc/manual/source/_static/images/gmp/automation/solutions.png
A doc/manual/source/_static/images/gmp/automation/speed.png
A doc/manual/source/_static/images/gmp/automation/submit.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_14.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_15.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_16.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_17.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_18.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_19.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_20.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_21.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_22.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_23.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_24.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_25.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_26.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_27.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_28.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_29.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_30.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_31.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_32.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_33.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_34.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_35.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_36.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_37.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_38.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_39.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_40.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_41.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_42.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_43.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_44.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_45.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_46.png
A doc/manual/source/_static/images/gmp/data_acquisition/experiment/gmp_data_acquisition_experiment_47.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_03.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_04.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_05.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_06.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_07.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_08.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_09.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_10.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_11.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_12.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp/gmp_data_acquisition_gmp_13.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_01.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_02.png
A doc/manual/source/_static/images/gmp/data_acquisition/gmp_data_acquisition_03.png
A doc/manual/source/_static/images/gmp/gmp.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_01.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_02.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_03.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_04.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_05.png
A doc/manual/source/_static/images/gmp/report_generator/gmp_report_generator_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_01.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_02.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_03.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_04.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_05.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_06.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_07.png
A doc/manual/source/_static/images/gmp/signature/gmp_signature_08.png
A doc/manual/source/_static/images/gmp/vhw_distribution.png
A doc/manual/source/_static/images/good_grid.png
A doc/manual/source/_static/images/grid-setup.png
A doc/manual/source/_static/images/grid_editor.png
A doc/manual/source/_static/images/grid_editor_multi_grids.png
A doc/manual/source/_static/images/grid_editor_multi_grids_sed.png
A doc/manual/source/_static/images/grid_editor_mw_view.png
A doc/manual/source/_static/images/grid_editor_subgrid1-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid1-good.png
A doc/manual/source/_static/images/grid_editor_subgrid2-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid2-good.png
A doc/manual/source/_static/images/grid_editor_subgrid3-bad.png
A doc/manual/source/_static/images/grid_editor_subgrid3-good.png
A doc/manual/source/_static/images/hori_cs.png
A doc/manual/source/_static/images/idist_comb_selPre.png
A doc/manual/source/_static/images/idist_comb_seldis.png
A doc/manual/source/_static/images/idist_combine.png
A doc/manual/source/_static/images/import_drop-triple.png
A doc/manual/source/_static/images/incr_sigmoid.png
A doc/manual/source/_static/images/load_auc-search.png
A doc/manual/source/_static/images/load_auc-trips.png
A doc/manual/source/_static/images/load_auc.png
A doc/manual/source/_static/images/load_colormap.png
A doc/manual/source/_static/images/load_model_dis-MID.png
A doc/manual/source/_static/images/load_model_distrib.png
A doc/manual/source/_static/images/load_noise.png
A doc/manual/source/_static/images/load_noise_details.png
A doc/manual/source/_static/images/load_us3.png
A doc/manual/source/_static/images/loaded_mwl-specfit.png
A doc/manual/source/_static/images/manage_data.png
A doc/manual/source/_static/images/manage_data_bhide.png
A doc/manual/source/_static/images/manage_data_bshow.png
A doc/manual/source/_static/images/manage_data_cmenu-1.png
A doc/manual/source/_static/images/manage_data_cmenu-2.png
A doc/manual/source/_static/images/manage_data_conf.png
A doc/manual/source/_static/images/manage_data_exp.png
A doc/manual/source/_static/images/manage_data_pasw.png
A doc/manual/source/_static/images/manage_data_sync.png
A doc/manual/source/_static/images/manage_data_thelp-1.png
A doc/manual/source/_static/images/manage_data_thelp-2.png
A doc/manual/source/_static/images/master-pw.png
A doc/manual/source/_static/images/model_editor.png
A doc/manual/source/_static/images/mwl-spe-fit-saved.png
A doc/manual/source/_static/images/mwl-spe-fitted.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res-fit.png
A doc/manual/source/_static/images/mwl-spe_spec-decom-res.png
A doc/manual/source/_static/images/mwl-spe_spec-decom.png
A doc/manual/source/_static/images/mwl-spec-fit-report.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-1.png
A doc/manual/source/_static/images/mwl-spec-viewer-report-2.png
A doc/manual/source/_static/images/mwl-species-fit.png
A doc/manual/source/_static/images/mwl_species_sim.png
A doc/manual/source/_static/images/mwl_species_simed.png
A doc/manual/source/_static/images/mwlr_spectra_3d.png
A doc/manual/source/_static/images/mwlr_spectra_cont.png
A doc/manual/source/_static/images/mwlr_spectra_f.png
A doc/manual/source/_static/images/mwlr_spectra_o.png
A doc/manual/source/_static/images/mwlr_spectra_save.png
A doc/manual/source/_static/images/mwlr_view_3dplot.png
A doc/manual/source/_static/images/mwlr_view_load.png
A doc/manual/source/_static/images/mwlr_view_pltctrl.png
A doc/manual/source/_static/images/mwlr_viewer.png
A doc/manual/source/_static/images/mwlr_viewer_3d.png
A doc/manual/source/_static/images/mwlr_viewer_ctl.png
A doc/manual/source/_static/images/mwlr_viewer_wvl.png
A doc/manual/source/_static/images/mwlr_viewer_xwavl.png
A doc/manual/source/_static/images/noise_prompt.png
A doc/manual/source/_static/images/noise_vec_db.png
A doc/manual/source/_static/images/norm_gridplot.png
A doc/manual/source/_static/images/optima_config_new.png
A doc/manual/source/_static/images/optima_host_config.png
A doc/manual/source/_static/images/pcsa.png
A doc/manual/source/_static/images/pcsa_3dplot.png
A doc/manual/source/_static/images/pcsa_adv_control.png
A doc/manual/source/_static/images/pcsa_all.png
A doc/manual/source/_static/images/pcsa_analys-line.png
A doc/manual/source/_static/images/pcsa_analys-sigm.png
A doc/manual/source/_static/images/pcsa_bitmap.png
A doc/manual/source/_static/images/pcsa_controls_simulated.png
A doc/manual/source/_static/images/pcsa_main-c.png
A doc/manual/source/_static/images/pcsa_mline_sigm.png
A doc/manual/source/_static/images/pcsa_mline_str.png
A doc/manual/source/_static/images/pcsa_mline_unsim.png
A doc/manual/source/_static/images/pcsa_mlines-line1.png
A doc/manual/source/_static/images/pcsa_mlines-line2.png
A doc/manual/source/_static/images/pcsa_mlines-sigm1.png
A doc/manual/source/_static/images/pcsa_mlines-sigm2.png
A doc/manual/source/_static/images/pcsa_regul.png
A doc/manual/source/_static/images/pcsa_regul_sim.png
A doc/manual/source/_static/images/pcsa_report.png
A doc/manual/source/_static/images/pcsa_res_viewer.png
A doc/manual/source/_static/images/pcsa_resplot.png
A doc/manual/source/_static/images/pcsa_rpscan-auto.png
A doc/manual/source/_static/images/pcsa_rpscan-select.png
A doc/manual/source/_static/images/pcsa_rpscan.png
A doc/manual/source/_static/images/pcsa_rpscan_sim.png
A doc/manual/source/_static/images/pcsa_sigmoid_eq.png
A doc/manual/source/_static/images/pcsa_simulated.png
A doc/manual/source/_static/images/pline_dsig.png
A doc/manual/source/_static/images/pline_power.png
A doc/manual/source/_static/images/pline_stline.png
A doc/manual/source/_static/images/plot_controls.png
A doc/manual/source/_static/images/predict1.png
A doc/manual/source/_static/images/predict2-1.png
A doc/manual/source/_static/images/predict2.png
A doc/manual/source/_static/images/print.png
A doc/manual/source/_static/images/process_crash.png
A doc/manual/source/_static/images/process_crash2.png
A doc/manual/source/_static/images/protocol_development/protocol_development_01.png
A doc/manual/source/_static/images/protocol_development/protocol_development_02.png
A doc/manual/source/_static/images/protocol_development/protocol_development_03.png
A doc/manual/source/_static/images/protocol_development/protocol_development_04.png
A doc/manual/source/_static/images/protocol_development/protocol_development_05.png
A doc/manual/source/_static/images/protocol_development/protocol_development_06.png
A doc/manual/source/_static/images/protocol_development/protocol_development_07.png
A doc/manual/source/_static/images/protocol_development/protocol_development_08.png
A doc/manual/source/_static/images/protocol_development/protocol_development_09.png
A doc/manual/source/_static/images/protocol_development/protocol_development_10.png
A doc/manual/source/_static/images/protocol_development/protocol_development_11.png
A doc/manual/source/_static/images/protocol_development/protocol_development_12.png
A doc/manual/source/_static/images/protocol_development/protocol_development_13.png
A doc/manual/source/_static/images/protocol_development/protocol_development_14.png
A doc/manual/source/_static/images/protocol_development/protocol_development_15.png
A doc/manual/source/_static/images/protocol_development/protocol_development_16.png
A doc/manual/source/_static/images/protocol_development/protocol_development_17.png
A doc/manual/source/_static/images/protocol_development/protocol_development_18.png
A doc/manual/source/_static/images/protocol_development/protocol_development_19.png
A doc/manual/source/_static/images/protocol_development/protocol_development_20.png
A doc/manual/source/_static/images/protocol_development/protocol_development_21.png
A doc/manual/source/_static/images/protocol_development/protocol_development_22.png
A doc/manual/source/_static/images/protocol_development/protocol_development_23.png
A doc/manual/source/_static/images/protocol_development/protocol_development_24.png
A doc/manual/source/_static/images/protocol_development/protocol_development_25.png
A doc/manual/source/_static/images/protocol_development/protocol_development_26.png
A doc/manual/source/_static/images/protocol_development/protocol_development_27.png
A doc/manual/source/_static/images/protocol_development/protocol_development_28.png
A doc/manual/source/_static/images/protocol_development/protocol_development_29.png
A doc/manual/source/_static/images/protocol_development/protocol_development_30.png
A doc/manual/source/_static/images/protocol_development/protocol_development_31.png
A doc/manual/source/_static/images/protocol_development/protocol_development_32.png
A doc/manual/source/_static/images/protocol_development/protocol_development_33.png
A doc/manual/source/_static/images/pseudo-abde-1.png
A doc/manual/source/_static/images/pseudo-abde-2.png
A doc/manual/source/_static/images/pseudo-abde-3.png
A doc/manual/source/_static/images/pseudo-abde-4.png
A doc/manual/source/_static/images/pseudo3d_comb_rmv.png
A doc/manual/source/_static/images/pseudo3d_combine.png
A doc/manual/source/_static/images/register.png
A doc/manual/source/_static/images/register0.png
A doc/manual/source/_static/images/register1.png
A doc/manual/source/_static/images/register2.png
A doc/manual/source/_static/images/register3.png
A doc/manual/source/_static/images/register4.png
A doc/manual/source/_static/images/register5.png
A doc/manual/source/_static/images/report.png
A doc/manual/source/_static/images/reporter-cmenu.png
A doc/manual/source/_static/images/reporter-details.png
A doc/manual/source/_static/images/reporter-loadprof.png
A doc/manual/source/_static/images/reporter-save.png
A doc/manual/source/_static/images/reporter-saveprof.png
A doc/manual/source/_static/images/reporter-view.png
A doc/manual/source/_static/images/reporter-viewitem.png
A doc/manual/source/_static/images/reporter.png
A doc/manual/source/_static/images/reporter_comrep.png
A doc/manual/source/_static/images/residualplot.png
A doc/manual/source/_static/images/residuals.png
A doc/manual/source/_static/images/rmsd_query-c.png
A doc/manual/source/_static/images/rmsd_query-o.png
A doc/manual/source/_static/images/rotor-add.png
A doc/manual/source/_static/images/rotor-save-calibration.png
A doc/manual/source/_static/images/rotor.png
A doc/manual/source/_static/images/rotorstretch-0.png
A doc/manual/source/_static/images/rotorstretch-1.png
A doc/manual/source/_static/images/rotorstretch-2.png
A doc/manual/source/_static/images/rotorstretch-3.png
A doc/manual/source/_static/images/rotorstretch-4.png
A doc/manual/source/_static/images/rotorstretch-5.png
A doc/manual/source/_static/images/rotorstretch-6.png
A doc/manual/source/_static/images/rotorstretch-7.png
A doc/manual/source/_static/images/rotorstretch_report.png
A doc/manual/source/_static/images/run_details.png
A doc/manual/source/_static/images/s20W_bar.png
A doc/manual/source/_static/images/sassoc.png
A doc/manual/source/_static/images/save_colormap.png
A doc/manual/source/_static/images/second_moment.png
A doc/manual/source/_static/images/select_edits.png
A doc/manual/source/_static/images/select_prefilt.png
A doc/manual/source/_static/images/select_runs.png
A doc/manual/source/_static/images/sequence.png
A doc/manual/source/_static/images/set-zvalue.png
A doc/manual/source/_static/images/simparams.png
A doc/manual/source/_static/images/simulatedReport.png
A doc/manual/source/_static/images/solution_edit.png
A doc/manual/source/_static/images/solution_new.png
A doc/manual/source/_static/images/solution_select.png
A doc/manual/source/_static/images/solution_settings.png
A doc/manual/source/_static/images/somo/somo_icon.png
A doc/manual/source/_static/images/spectrum_extinction.png
A doc/manual/source/_static/images/sw_spectrum.png
A doc/manual/source/_static/images/time_derivative.png
A doc/manual/source/_static/images/timestate-0.png
A doc/manual/source/_static/images/timestate-1.png
A doc/manual/source/_static/images/timestate-2.png
A doc/manual/source/_static/images/timestate-3.png
A doc/manual/source/_static/images/timestate-4.png
A doc/manual/source/_static/images/ultra.xpm
A doc/manual/source/_static/images/ultrascan3.png
A doc/manual/source/_static/images/upload_fit_spectrum.png
A doc/manual/source/_static/images/us_buffer.png
A doc/manual/source/_static/images/us_buffer_spect.png
A doc/manual/source/_static/images/us_buoyanc-2.png
A doc/manual/source/_static/images/us_buoyanc.png
A doc/manual/source/_static/images/us_conv-RA.png
A doc/manual/source/_static/images/us_convert/us_convert_01.png
A doc/manual/source/_static/images/us_convert/us_convert_02.png
A doc/manual/source/_static/images/us_convert/us_convert_03.png
A doc/manual/source/_static/images/us_convert/us_convert_04.png
A doc/manual/source/_static/images/us_convert/us_convert_05.png
A doc/manual/source/_static/images/us_convert/us_convert_06.png
A doc/manual/source/_static/images/us_convert/us_convert_07.png
A doc/manual/source/_static/images/us_convert/us_convert_08.png
A doc/manual/source/_static/images/us_convert/us_convert_09.png
A doc/manual/source/_static/images/us_convert/us_convert_10.png
A doc/manual/source/_static/images/us_convert/us_convert_11.png
A doc/manual/source/_static/images/us_convert/us_convert_12.png
A doc/manual/source/_static/images/us_convert/us_convert_13.png
A doc/manual/source/_static/images/us_convert/us_convert_14.png
A doc/manual/source/_static/images/us_convert_01.png
A doc/manual/source/_static/images/us_convert_02.png
A doc/manual/source/_static/images/us_convert_03.png
A doc/manual/source/_static/images/us_convert_04.png
A doc/manual/source/_static/images/us_convert_05.png
A doc/manual/source/_static/images/us_convert_06.png
A doc/manual/source/_static/images/us_convert_07.png
A doc/manual/source/_static/images/us_convert_08.png
A doc/manual/source/_static/images/us_convert_09.png
A doc/manual/source/_static/images/us_convert_10.png
A doc/manual/source/_static/images/us_convert_11.png
A doc/manual/source/_static/images/us_convert_12.png
A doc/manual/source/_static/images/us_convert_13.png
A doc/manual/source/_static/images/us_convert_14.png
A doc/manual/source/_static/images/us_convert_definedscans.png
A doc/manual/source/_static/images/us_convert_definesubset.png
A doc/manual/source/_static/images/us_edit.png
A doc/manual/source/_static/images/us_edit_mwl.png
A doc/manual/source/_static/images/us_equiltime.png
A doc/manual/source/_static/images/us_extinction-0.png
A doc/manual/source/_static/images/us_extinction-00.png
A doc/manual/source/_static/images/us_extinction-000.png
A doc/manual/source/_static/images/us_extinction-1.png
A doc/manual/source/_static/images/us_extinction-2.png
A doc/manual/source/_static/images/us_extinction-3.png
A doc/manual/source/_static/images/us_fds_filemanager-0.png
A doc/manual/source/_static/images/us_fds_filemanager-1.png
A doc/manual/source/_static/images/us_fds_filemanager-2.png
A doc/manual/source/_static/images/us_fds_filemanager-3.png
A doc/manual/source/_static/images/us_fds_filemanager-4.png
A doc/manual/source/_static/images/us_investigator-2.png
A doc/manual/source/_static/images/us_investigator.png
A doc/manual/source/_static/images/us_modelmetrics-0.png
A doc/manual/source/_static/images/us_modmet_report.png
A doc/manual/source/_static/images/us_project.png
A doc/manual/source/_static/images/us_project1.png
A doc/manual/source/_static/images/us_project2.png
A doc/manual/source/_static/images/us_project3.png
A doc/manual/source/_static/images/us_project_add-supdata.png
A doc/manual/source/_static/images/us_project_edit-supdata.png
A doc/manual/source/_static/images/us_project_web.png
A doc/manual/source/_static/images/us_project_webed.png
A doc/manual/source/_static/images/us_solution1.png
A doc/manual/source/_static/images/us_solution2.png
A doc/manual/source/_static/images/us_solution3.png
A doc/manual/source/_static/images/us_spectrum-0-upded.png
A doc/manual/source/_static/images/us_spectrum-0.png
A doc/manual/source/_static/images/us_spectrum-1.png
A doc/manual/source/_static/images/us_spectrum-load.png
A doc/manual/source/_static/images/usfont-1.png
A doc/manual/source/_static/images/usfont-2.png
A doc/manual/source/_static/images/vhw_combine-combo.png
A doc/manual/source/_static/images/vhw_combine-envel.png
A doc/manual/source/_static/images/vhw_combine-selrun.png
A doc/manual/source/_static/images/vhw_combine.png
A doc/manual/source/_static/images/vhw_distribution.png
A doc/manual/source/_static/images/vhw_enh_groups.png
A doc/manual/source/_static/images/vhw_enh_groups.png6-33-11.png
A doc/manual/source/_static/images/vhw_enh_groups_res.png
A doc/manual/source/_static/images/vhw_enhanced.png
A doc/manual/source/_static/images/vhw_histogram.png
A doc/manual/source/_static/images/xpn_report1.png
A doc/manual/source/_static/images/xpn_report2.png
A doc/manual/source/_static/images/xpn_viewer-loaded.png
A doc/manual/source/_static/images/xpn_viewer-saved.png
A doc/manual/source/_static/images/xpn_viewer.png
A doc/manual/source/_static/images/zvalue_eq.png
A doc/manual/source/_static/js/language_data.js
A doc/manual/source/_static/js/sphinx_highlight.js
A doc/manual/source/_static/language_data.js
A doc/manual/source/_static/qthelp.css
A doc/manual/source/_static/sphinx_highlight.js
A doc/manual/source/analysprof_general.rst
A doc/manual/source/analyte/analyte_edit.rst
A doc/manual/source/analyte/analyte_new.rst
A doc/manual/source/analyte/analyte_select.rst
A doc/manual/source/analyte/analyte_settings.rst
A doc/manual/source/analyte/index.rst
A doc/manual/source/associations.rst
A doc/manual/source/astfem_sim.rst
A doc/manual/source/auto_index.py
A doc/manual/source/beckman_openauc.rst
A doc/manual/source/buffer/buffer_edit.rst
A doc/manual/source/buffer/buffer_new.rst
A doc/manual/source/buffer/buffer_select.rst
A doc/manual/source/buffer/buffer_settings.rst
A doc/manual/source/buffer/index.rst
A doc/manual/source/buoyancy_editor.rst
A doc/manual/source/colorgradient.rst
A doc/manual/source/combine_models.rst
A doc/manual/source/common_dialogs.rst
A doc/manual/source/components.rst
A doc/manual/source/conf.py
A doc/manual/source/config.rst
A doc/manual/source/convert.rst
A doc/manual/source/ddist_combine.rst
A doc/manual/source/dens_match.rst
A doc/manual/source/dmga_init.rst
A doc/manual/source/dmga_init_constr.rst
A doc/manual/source/experiment/cells.rst
A doc/manual/source/experiment/general.rst
A doc/manual/source/experiment/import.rst
A doc/manual/source/experiment/index.rst
A doc/manual/source/experiment/liveupdate.rst
A doc/manual/source/experiment/optics.rst
A doc/manual/source/experiment/range.rst
A doc/manual/source/experiment/rotor.rst
A doc/manual/source/experiment/solutions.rst
A doc/manual/source/experiment/speeds.rst
A doc/manual/source/experiment/submit.rst
A doc/manual/source/export_legacy.rst
A doc/manual/source/fe_match/fe_dmga_adv.rst
A doc/manual/source/fe_match/fe_match_adv.rst
A doc/manual/source/fe_match/fe_match_main.rst
A doc/manual/source/fe_match/fe_match_simulate.rst
A doc/manual/source/fe_match/index.rst
A doc/manual/source/fit_meniscus.rst
A doc/manual/source/ga_initialize.rst
A doc/manual/source/global_equil.rst
A doc/manual/source/gmp/gmp.rst
A doc/manual/source/gmp/gmp_audit_trail.rst
A doc/manual/source/gmp/gmp_automation.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_experiment.rst
A doc/manual/source/gmp/gmp_data_acquisition/gmp_data_acquisition_gmp.rst
A doc/manual/source/gmp/gmp_data_acquisition/index.rst
A doc/manual/source/gmp/gmp_protocol_development.rst
A doc/manual/source/gmp/gmp_report_generator.rst
A doc/manual/source/gmp/gmp_signature.rst
A doc/manual/source/gmp/index.rst
A doc/manual/source/grid_editor.rst
A doc/manual/source/idist_combine.rst
A doc/manual/source/index.rst
A doc/manual/source/manage_data.rst
A doc/manual/source/model_editor.rst
A doc/manual/source/multi-wavelength/index.rst
A doc/manual/source/multi-wavelength/mwl_species_fit.rst
A doc/manual/source/multi-wavelength/mwl_species_sim.rst
A doc/manual/source/multi-wavelength/mwl_spectra.rst
A doc/manual/source/multi-wavelength/mwlr_viewer.rst
A doc/manual/source/pcsa/index.rst
A doc/manual/source/pcsa/load_modelrecs.rst
A doc/manual/source/pcsa/pcsa.rst
A doc/manual/source/pcsa/pcsa_adv.rst
A doc/manual/source/pcsa/pcsa_analys.rst
A doc/manual/source/pcsa/pcsa_mlines.rst
A doc/manual/source/pcsa/pcsa_results.rst
A doc/manual/source/pcsa/pcsa_rpscan.rst
A doc/manual/source/predict1.rst
A doc/manual/source/predict2.rst
A doc/manual/source/pseudo3d.rst
A doc/manual/source/ramp_data.rst
A doc/manual/source/register.rst
A doc/manual/source/reporter.rst
A doc/manual/source/requirements.txt
A doc/manual/source/rmsd_query.rst
A doc/manual/source/rotor_calibration.rst
A doc/manual/source/rotors.rst
A doc/manual/source/run_details.rst
A doc/manual/source/sassoc.rst
A doc/manual/source/second_moment.rst
A doc/manual/source/simparams.rst
A doc/manual/source/solutions/index.rst
A doc/manual/source/solutions/solution_edit.rst
A doc/manual/source/solutions/solution_new.rst
A doc/manual/source/solutions/solution_select.rst
A doc/manual/source/solutions/solution_settings.rst
A doc/manual/source/start_page-abde.rst
A doc/manual/source/start_page-dm.rst
A doc/manual/source/start_page-int.rst
A doc/manual/source/start_page-mw.rst
A doc/manual/source/start_page-new.rst
A doc/manual/source/start_page-rpt.rst
A doc/manual/source/start_page.rst
A doc/manual/source/time_derivative.rst
A doc/manual/source/tmst_viewer.rst
A doc/manual/source/us_administrator.rst
A doc/manual/source/us_buoyancy.rst
A doc/manual/source/us_edit.rst
A doc/manual/source/us_equiltime.rst
A doc/manual/source/us_extinction.rst
A doc/manual/source/us_fds_filemanager.rst
A doc/manual/source/us_investigator.rst
A doc/manual/source/us_modelmetrics.rst
A doc/manual/source/us_project.rst
A doc/manual/source/us_spectrum.rst
A doc/manual/source/vhw_combine.rst
A doc/manual/source/vhw_distrib_plot.rst
A doc/manual/source/vhw_enhanced.rst
A doc/manual/source/xpn_viewer.rst
R doc/manual/template.img.body
R doc/manual/tidy.conf
R doc/manual/time_derivative.body
R doc/manual/ultrascan3.txt
R doc/manual/us_buffer.body
R doc/manual/us_edit.body
R doc/manual/us_edit_mwl.body
R doc/manual/us_equiltime.body
R doc/manual/us_fds_filemanager.body
R doc/manual/us_investigator.body
R doc/manual/us_modelmetrics.body
R doc/manual/us_project.body
R doc/manual/us_solution.body
R doc/manual/uscol.body
R doc/manual/uscolor2.body
R doc/manual/usfont.body
R doc/manual/usfont2.body
R doc/manual/vhw_combine.body
R doc/manual/vhw_distrib_plot.body
R doc/manual/vhw_enhanced.body
R doc/manual/wrapped-images.lst
M etc/etc_belongs_list.txt
R etc/us3-GMP-icon-128x128.ico
M etc/us3-GMP-icon-128x128.png
R etc/us3-GMP-icon-128x128.xpm
R etc/us3-GMP-icon-32x32.ico
R etc/us3-GMP-icon-32x32.png
R etc/us3-GMP-icon-32x32.xpm
R etc/us3-GMP-icon-48x48.ico
R etc/us3-GMP-icon-48x48.png
R etc/us3-GMP-icon-48x48.xpm
M gui/CMakeLists.txt
M gui/libus_gui.pro
M gui/us_abstractrotor_gui.h
M gui/us_analyte_gui.cpp
M gui/us_analyte_gui.h
M gui/us_buffer_gui.cpp
M gui/us_buffer_gui.h
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M gui/us_data_loader.h
M gui/us_experiment_gui.h
M gui/us_extinction_gui.cpp
M gui/us_extinction_gui.h
M gui/us_get_run.h
M gui/us_help.cpp
M gui/us_load_auc.h
M gui/us_model_gui.cpp
M gui/us_model_gui.h
M gui/us_model_loader.h
M gui/us_plot.cpp
M gui/us_plot.h
M gui/us_plot3d.cpp
M gui/us_properties.cpp
M gui/us_rotor_gui.h
M gui/us_select_edits.h
M gui/us_select_item.cpp
M gui/us_select_item.h
M gui/us_select_runs.h
M gui/us_select_triples.h
M gui/us_solution_gui.cpp
M gui/us_solution_gui.h
M gui/us_spectrodata.cpp
M gui/us_spectrodata.h
M local.pri.template
M makeall.sh
A pkg/macos/README.md
A pkg/macos/component.plist
A pkg/macos/distribution.xml.in
A pkg/macos/launcher/UltraScan3.app/Contents/Info.plist
A pkg/macos/launcher/UltraScan3.app/Contents/MacOS/UltraScan3
A pkg/macos/postinstall
A pkg/macos/preinstall
A pkg/macos/resources/Welcome.txt.in
A pkg/macos/resources/background.png
A pkg/macos/ultrascan_sysctl.plist
A pkg/macos/uninstall.sh
M programs/CMakeLists.txt
M programs/us/CMakeLists.txt
M programs/us/revision.sh
M programs/us/us.cpp
M programs/us/us.pro
R programs/us/us_de_DE.ts
M programs/us_2dsa/us_2dsa.h
M programs/us_2dsa/us_adv_analysis_2d.h
M programs/us_2dsa/us_analysis_control_2d.h
M programs/us_2dsa/us_plot_control_2d.h
M programs/us_2dsa/us_show_norm.cpp
M programs/us_abde/us_norm_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_analysis_profile/us_analysis_profile.h
M programs/us_analysis_profile/us_anapro_utils.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_clipdata.h
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_config.pro
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_ddist_combine.h
M programs/us_density_match/us_density_match.cpp
M programs/us_density_match/us_model_params.h
M programs/us_density_match/us_remove_models.h
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_edit/us_edit_scan.h
M programs/us_edit/us_exclude_profile.h
M programs/us_edit/us_select_lambdas.h
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_experiment_gui_optima.h
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_fematch/us_adv_dmgamc.h
M programs/us_fematch/us_advanced_fem.h
M programs/us_fematch/us_fematch.h
M programs/us_fematch/us_plot_control_fem.h
M programs/us_ga_init/us_ga_init.cpp
M programs/us_ga_init/us_ga_init.h
M programs/us_ga_init/us_solutedata.cpp
M programs/us_globalequil/us_eqfit_control.h
M programs/us_globalequil/us_eqmodel_control.h
M programs/us_globalequil/us_model_adpars.h
M programs/us_globalequil/us_model_select.h
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_integral/us_delete_models.h
M programs/us_integral/us_integral.cpp
M programs/us_integral/us_integral.h
M programs/us_legacy_converter/us_legacy_converter.cpp
M programs/us_legacy_converter/us_legacy_converter.h
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_mpi_analysis/2dsa_worker.cpp
M programs/us_mpi_analysis/CMakeLists.txt
M programs/us_mpi_analysis/dmga_master.cpp
M programs/us_mpi_analysis/ga_worker.cpp
M programs/us_mpi_analysis/pcsa_worker.cpp
M programs/us_mpi_analysis/revision.sh
M programs/us_mpi_analysis/us_mpi_analysis.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.h
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.h
M programs/us_mwl_spectra/us_mwl_spectra.h
M programs/us_mwl_spectra/us_mwls_pltctl.h
M programs/us_mwlr_viewer/us_mwl_pltctrl.h
M programs/us_mwlr_viewer/us_mwlr_viewer.h
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_analysis_control_pc.h
M programs/us_pcsa/us_mlplot.h
M programs/us_pcsa/us_mrecs_loader.h
M programs/us_pcsa/us_pcsa.h
M programs/us_pcsa/us_plot_control_pc.h
M programs/us_pcsa/us_rpscan.h
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.cpp
M programs/us_pseudo3d_combine/us_pseudo3d_combine.h
M programs/us_pseudo3d_combine/us_remove_distros.h
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.h
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_query_rmsd/us_query_rmsd.h
M programs/us_ramp/us_experiment_gui_ra.h
M programs/us_ramp/us_ramp_gui.h
M programs/us_ramp/us_select_triples_ra.h
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_spectrum/us_spectrum.cpp
M programs/us_spectrum/us_spectrum.h
M programs/us_vhw_combine/us_vhwc_pltctl.h
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
R propignore
R proppng
R proptext
M qmakeall.sh
M qwtplot3d/CMakeLists.txt
R qwtplot3d/lingua_de.ts
A scripts/bootstrap-linux.sh
A scripts/bootstrap-macos.sh
A scripts/bootstrap-windows.ps1
A scripts/bootstrap.bat
M scripts/build.bat
M scripts/build.ps1
M scripts/build.sh
M test/utils/test_us_crypto.cpp
A test/utils/test_us_help_pages.cpp
M test/utils/test_us_regex.cpp
M test/utils/test_us_time_state.cpp
A us-build
M utils/CMakeLists.txt
M utils/libus_utils.pro
M utils/us_astfem_math.cpp
M utils/us_astfem_math.h
M utils/us_astfem_rsa.cpp
M utils/us_buffer.h
M utils/us_cfa_data.cpp
M utils/us_crypto.cpp
M utils/us_crypto.h
M utils/us_extern.h
M utils/us_lm.cpp
M utils/us_matrix.cpp
M utils/us_memory.cpp
M utils/us_run_protocol.cpp
M utils/us_run_protocol.h
M utils/us_solve_sim.cpp
M utils/us_time_state.cpp
M utils/us_time_state.h
M utils/us_timer.h
M utils/us_xpn_data.cpp
M vcpkg.json
Log Message:
-----------
Merge branch 'main' into ehb54-issue-766
Compare: https://github.com/ehb54/ultrascan3/compare/42f2fd0ef0f9...45ef026ad65a
To unsubscribe from these emails, change your notification settings at https://github.com/ehb54/ultrascan3/settings/notifications
More information about the us-commits
mailing list