From noreply at github.com  Fri May  1 05:10:30 2026
From: noreply at github.com (aaron-auc)
Date: Fri, 01 May 2026 04:10:30 -0700
Subject: [us-commits] [ehb54/ultrascan3] 97bcfb: fix: resolve warning
Message-ID: <ehb54/ultrascan3/push/refs/heads/800-enhancement-nightly-build-using-vcpkg/438ca1-97bcfb@github.com>

  Branch: refs/heads/800-enhancement-nightly-build-using-vcpkg
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 97bcfb0c7e017363e4cad1a6b8cf95a30bed82be
      https://github.com/ehb54/ultrascan3/commit/97bcfb0c7e017363e4cad1a6b8cf95a30bed82be
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-01 (Fri, 01 May 2026)

  Changed paths:
    M CMakeLists.txt

  Log Message:
  -----------
  fix: resolve warning



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From noreply at github.com  Sat May  2 11:41:06 2026
From: noreply at github.com (aaron-auc)
Date: Sat, 02 May 2026 10:41:06 -0700
Subject: [us-commits] [ehb54/ultrascan3] 2964bb: mod: standard naming and xz
 used
Message-ID: <ehb54/ultrascan3/push/refs/heads/800-enhancement-nightly-build-using-vcpkg/97bcfb-2964bb@github.com>

  Branch: refs/heads/800-enhancement-nightly-build-using-vcpkg
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 2964bb347925c13d2a1dcfe7b03f3ce469c6190a
      https://github.com/ehb54/ultrascan3/commit/2964bb347925c13d2a1dcfe7b03f3ce469c6190a
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-02 (Sat, 02 May 2026)

  Changed paths:
    M .github/workflows/nightly-builds.yml
    M .github/workflows/nightly-oraclelinux8.yml
    M .github/workflows/nightly-ubuntu.yml
    M .github/workflows/release.yml
    M admin/cmake/packaging/linux/LinuxHpcPkg.cmake
    M admin/cmake/packaging/linux/LinuxPkg.cmake
    M scripts/build.sh

  Log Message:
  -----------
  mod: standard naming and xz used



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From noreply at github.com  Thu May  7 08:49:49 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 07:49:49 -0700
Subject: [us-commits] [ehb54/us3_sql]
Message-ID: <ehb54/us3_sql/push/refs/heads/831-bug-us3_procedurescheck_usercheck_user_email-fails-check-on-activated/000000-cfbee6@github.com>

  Branch: refs/heads/831-bug-us3_procedurescheck_usercheck_user_email-fails-check-on-activated
  Home:   https://github.com/ehb54/us3_sql

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From noreply at github.com  Thu May  7 08:57:16 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 07:57:16 -0700
Subject: [us-commits] [ehb54/us3_sql]
Message-ID: <ehb54/us3_sql/push/refs/heads/832-enhancement-audit-person-table/000000-cfbee6@github.com>

  Branch: refs/heads/832-enhancement-audit-person-table
  Home:   https://github.com/ehb54/us3_sql

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From noreply at github.com  Thu May  7 08:57:42 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 07:57:42 -0700
Subject: [us-commits] [ehb54/us3lims_dbinst]
Message-ID: <ehb54/us3lims_dbinst/push/refs/heads/832-enhancement-audit-person-table/000000-3ab47a@github.com>

  Branch: refs/heads/832-enhancement-audit-person-table
  Home:   https://github.com/ehb54/us3lims_dbinst

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From noreply at github.com  Thu May  7 10:05:12 2026
From: noreply at github.com (emre brookes)
Date: Thu, 07 May 2026 09:05:12 -0700
Subject: [us-commits] [ehb54/us3lims_webinfo]
Message-ID: <ehb54/us3lims_webinfo/push/refs/heads/ehb54-issue-833/000000-cb10f1@github.com>

  Branch: refs/heads/ehb54-issue-833
  Home:   https://github.com/ehb54/us3lims_webinfo

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From noreply at github.com  Thu May  7 10:06:15 2026
From: noreply at github.com (emre brookes)
Date: Thu, 07 May 2026 09:06:15 -0700
Subject: [us-commits] [ehb54/us3lims_webinfo] 5748a7: remove juelish
Message-ID: <ehb54/us3lims_webinfo/push/refs/heads/ehb54-issue-833/cb10f1-5748a7@github.com>

  Branch: refs/heads/ehb54-issue-833
  Home:   https://github.com/ehb54/us3lims_webinfo
  Commit: 5748a73436ebefec548b50103b31f3a566e34634
      https://github.com/ehb54/us3lims_webinfo/commit/5748a73436ebefec548b50103b31f3a566e34634
  Author: ehb54 <brookes at uthscsa.edu>
  Date:   2026-05-07 (Thu, 07 May 2026)

  Changed paths:
    M lims_servers.php

  Log Message:
  -----------
  remove juelish



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From noreply at github.com  Thu May  7 16:49:50 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 15:49:50 -0700
Subject: [us-commits] [ehb54/us3lims_common] c52d6c: remove: airavata files
Message-ID: <ehb54/us3lims_common/push/refs/heads/780-request-pbs-gfac-cleanup/913646-cf287c@github.com>

  Branch: refs/heads/780-request-pbs-gfac-cleanup
  Home:   https://github.com/ehb54/us3lims_common
  Commit: c52d6c2d0e59cf07f23f59aaf8ac07b5a851dffd
      https://github.com/ehb54/us3lims_common/commit/c52d6c2d0e59cf07f23f59aaf8ac07b5a851dffd
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-04-09 (Thu, 09 Apr 2026)

  Changed paths:
    R class_local/airavata-client-properties.ini
    R class_local/attic/update_local.sh
    R class_local/jobsubmit_aira.php
    R class_local/submit_airavata.php
    R class_local/submit_gfac.php
    R class_local/thrift_includes.php

  Log Message:
  -----------
  remove: airavata files


  Commit: cf287c5a979775c0063672c4abd4ef698a1f4a4e
      https://github.com/ehb54/us3lims_common/commit/cf287c5a979775c0063672c4abd4ef698a1f4a4e
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-07 (Thu, 07 May 2026)

  Changed paths:
    R class/experiment_cancel.php
    R class/experiment_errors.php
    R class/experiment_resource.php
    R class/experiment_status.php
    R class/job_details.php
    M class/jobsubmit.php
    R class/jobsubmit_aira.php
    R class/submit_airavata.php
    R class/submit_gfac.php
    R class/submit_local.php
    A class/submit_slurm.php
    R class_local/README.txt
    R class_local/experiment_cancel.php
    R class_local/experiment_errors.php
    R class_local/experiment_status.php
    R class_local/job_details.php
    R class_local/jobsubmit.php
    R class_local/priority.php
    R class_local/submit_local.php
    M global_config.php.template

  Log Message:
  -----------
  remove: Remove Airavata/GFAC submission code


Compare: https://github.com/ehb54/us3lims_common/compare/913646bae389...cf287c5a9797

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From noreply at github.com  Thu May  7 17:32:16 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 16:32:16 -0700
Subject: [us-commits] [ehb54/us3lims_gridctl] a0bb3a: remove: airavata files
Message-ID: <ehb54/us3lims_gridctl/push/refs/heads/780-request-pbs-gfac-cleanup/7aa45a-ef1963@github.com>

  Branch: refs/heads/780-request-pbs-gfac-cleanup
  Home:   https://github.com/ehb54/us3lims_gridctl
  Commit: a0bb3ac3eb21f2c3e296d5f363e53ef2f09b4451
      https://github.com/ehb54/us3lims_gridctl/commit/a0bb3ac3eb21f2c3e296d5f363e53ef2f09b4451
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-04-09 (Thu, 09 Apr 2026)

  Changed paths:
    R cleanup.php
    R cleanup_adev.php
    R cleanup_aira.php
    R cleanup_gfac.php
    R gridctl_dev.php
    R gridctl_pro.php
    R jobmonitor/cleanup.php

  Log Message:
  -----------
  remove: airavata files


  Commit: ef1963ed749d82147475a9974c422d6be18d6330
      https://github.com/ehb54/us3lims_gridctl/commit/ef1963ed749d82147475a9974c422d6be18d6330
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-07 (Thu, 07 May 2026)

  Changed paths:
    R autoflow_util/finishprocess.php
    R autoflow_util/makeafrequest.php
    R autoflow_util/makeafrequest2.php
    R autoflow_util/makeafrequest2DSA-CG.php
    R autoflow_util/makeafrequest2DSA_MC_cluster.php
    R autoflow_util/makeafrequestPCSA.php
    R autoflow_util/makeafrequestPCSAonechannel.php
    M crontab_root.txt
    M crontab_us3.txt
    M esign.php
    M gridctl.php
    R jobmonitor/attic/gridmonitor.php
    R jobmonitor/cleanup_gfac.php
    A jobmonitor/cleanup_job.php
    M jobmonitor/gridctl.php
    M jobmonitor/joblinkjson.php
    M jobmonitor/jobmonitor.php
    M listen-config.php.template
    M manage-us3-pipe.php
    M runID_info.php
    M submitctl.php
    M submitone.php
    R us3-notice.php

  Log Message:
  -----------
  remove: Airavata/GFAC jobmonitor paths


Compare: https://github.com/ehb54/us3lims_gridctl/compare/7aa45a2b984b...ef1963ed749d

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From noreply at github.com  Thu May  7 19:38:08 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 18:38:08 -0700
Subject: [us-commits] [ehb54/us3lims_dbinst]
Message-ID: <ehb54/us3lims_dbinst/push/refs/heads/836-request-add-account_enabled-checks-and-edit-capability/000000-3ab47a@github.com>

  Branch: refs/heads/836-request-add-account_enabled-checks-and-edit-capability
  Home:   https://github.com/ehb54/us3lims_dbinst

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From noreply at github.com  Thu May  7 17:38:14 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 16:38:14 -0700
Subject: [us-commits] [ehb54/us3lims_webinfo] ba6174: mod: remove unused
 header referencea
Message-ID: <ehb54/us3lims_webinfo/push/refs/heads/835-request-update-webinfo/cb10f1-ba6174@github.com>

  Branch: refs/heads/835-request-update-webinfo
  Home:   https://github.com/ehb54/us3lims_webinfo
  Commit: ba617460c7ac29d3f7d1f56650c4fcb570442d99
      https://github.com/ehb54/us3lims_webinfo/commit/ba617460c7ac29d3f7d1f56650c4fcb570442d99
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-07 (Thu, 07 May 2026)

  Changed paths:
    M header.php

  Log Message:
  -----------
  mod: remove unused header referencea



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From noreply at github.com  Thu May  7 17:35:47 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 16:35:47 -0700
Subject: [us-commits] [ehb54/us3lims_webinfo]
Message-ID: <ehb54/us3lims_webinfo/push/refs/heads/835-request-update-webinfo/000000-cb10f1@github.com>

  Branch: refs/heads/835-request-update-webinfo
  Home:   https://github.com/ehb54/us3lims_webinfo

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From noreply at github.com  Thu May  7 17:52:30 2026
From: noreply at github.com (aaron-auc)
Date: Thu, 07 May 2026 16:52:30 -0700
Subject: [us-commits] [ehb54/us3lims_dbinst] 60e5df: remove: airavata files
Message-ID: <ehb54/us3lims_dbinst/push/refs/heads/780-request-pbs-gfac-cleanup/3ab47a-05a0ac@github.com>

  Branch: refs/heads/780-request-pbs-gfac-cleanup
  Home:   https://github.com/ehb54/us3lims_dbinst
  Commit: 60e5df054d8acaf34c2cdbc7414cd33a2b01dfc3
      https://github.com/ehb54/us3lims_dbinst/commit/60e5df054d8acaf34c2cdbc7414cd33a2b01dfc3
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-04-09 (Thu, 09 Apr 2026)

  Changed paths:
    R lib/rss_cache.inc
    R lib/rss_fetch.inc
    R lib/rss_parse.inc
    R lib/rss_utils.inc

  Log Message:
  -----------
  remove: airavata files


  Commit: 05a0ac85f177f7b25178eb8b1af0430807446928
      https://github.com/ehb54/us3lims_dbinst/commit/05a0ac85f177f7b25178eb8b1af0430807446928
  Author: aaron-auc <aaron at aucsolutions.com>
  Date:   2026-05-07 (Thu, 07 May 2026)

  Changed paths:
    M 2DSA-CG_2.php
    M 2DSA_2.php
    M DMGA_2.php
    M GA_3.php
    M HPC_requests.php
    M PCSA_2.php
    A job_lifecycle.php
    M lib/utility.php
    M links.php
    M queue_content.php
    M queue_viewer.php
    M runID_info.php
    M show_clusters.php

  Log Message:
  -----------
  mod: Replace Airavata job paths with Slurm-based LIMS workflow


Compare: https://github.com/ehb54/us3lims_dbinst/compare/3ab47a9bad1e...05a0ac85f177

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