[us-commits] [ehb54/ultrascan3] 5913a0: Add GIMP 3 UltraScan logo generator
aaron-auc
noreply at github.com
Wed Sep 2 11:11:05 MDT 2026
Branch: refs/heads/main
Home: https://github.com/ehb54/ultrascan3
Commit: 5913a0a4a968d89c2fc6d6a8cb94d093ae0e08d8
https://github.com/ehb54/ultrascan3/commit/5913a0a4a968d89c2fc6d6a8cb94d093ae0e08d8
Author: aaron-auc <aaron at aucsolutions.com>
Date: 2026-08-13 (Thu, 13 Aug 2026)
Changed paths:
A doc/develop/gimp/README.md
A doc/develop/gimp/ultrascan_gimpv3.scm
Log Message:
-----------
Add GIMP 3 UltraScan logo generator
Refs ehb54/ultrascan-tickets#1007
Commit: 8b5d541bfaf2dd1d710272036824ba1a53537ee5
https://github.com/ehb54/ultrascan3/commit/8b5d541bfaf2dd1d710272036824ba1a53537ee5
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-08-27 (Thu, 27 Aug 2026)
Changed paths:
A .github/workflows/somo-module-tests.yml
M .gitignore
M CMakePresets.json
M VERSION
M doc/manual/source/conf.py
M gui.pri
M gui/us_abstractrotor_gui.cpp
M gui/us_analysis_base2.h
M gui/us_analyte_gui.cpp
M gui/us_associations_gui.cpp
M gui/us_associations_gui.h
M gui/us_buffer_gui.cpp
M gui/us_choice.cpp
M gui/us_combined_plots_parms_gui.cpp
M gui/us_convert_gui.cpp
M gui/us_convert_gui.h
M gui/us_data_loader.cpp
M gui/us_edit_spectrum.cpp
M gui/us_editor.cpp
M gui/us_experiment_gui.cpp
M gui/us_extinctfitter_gui.cpp
M gui/us_extinction_gui.cpp
M gui/us_failed_gmp_run_gui.cpp
M gui/us_get_run.cpp
M gui/us_intensity.cpp
M gui/us_investigator.cpp
M gui/us_license.cpp
M gui/us_load_auc.cpp
M gui/us_minimize.cpp
M gui/us_model_gui.cpp
M gui/us_model_loader.cpp
M gui/us_new_spectrum.cpp
M gui/us_noise_loader.cpp
M gui/us_passwd.cpp
M gui/us_plot.cpp
M gui/us_plot.h
M gui/us_plot3d.cpp
M gui/us_predict1.cpp
M gui/us_predict1.h
M gui/us_project_gui.cpp
M gui/us_properties.cpp
M gui/us_properties.h
M gui/us_report_general_gui.cpp
M gui/us_report_gui.cpp
M gui/us_rotor_gui.cpp
M gui/us_run_details2.cpp
M gui/us_sassoc.cpp
M gui/us_sassoc.h
M gui/us_scan_excl_gui.cpp
M gui/us_select_edits.cpp
M gui/us_select_item.cpp
M gui/us_select_runs.cpp
M gui/us_select_triples.cpp
M gui/us_sim_params_gui.cpp
M gui/us_solution_gui.cpp
M gui/us_table.cpp
M gui/us_theme.cpp
M gui/us_theme.h
M gui/us_tmst_plot.cpp
M gui/us_widgets.cpp
M gui/us_widgets_dialog.cpp
M programs/us/us.cpp
M programs/us_2dplot/us_2dplot.cpp
M programs/us_2dsa/us_2dsa.cpp
M programs/us_2dsa/us_2dsa_process.cpp
M programs/us_2dsa/us_adv_analysis_2d.cpp
M programs/us_2dsa/us_analysis_control_2d.cpp
M programs/us_2dsa/us_plot_control_2d.cpp
M programs/us_2dsa/us_resplot_2d.cpp
M programs/us_2dsa/us_show_norm.cpp
M programs/us_2dsa/us_show_norm.h
M programs/us_2dsa/us_worker_2d.cpp
M programs/us_abde/us_abde_main.cpp
M programs/us_abde/us_norm_profile.cpp
M programs/us_abde/us_norm_profile.h
M programs/us_analysis_profile/us_analysis_profile.cpp
M programs/us_astfem_sim/us_astfem_sim.cpp
M programs/us_astfem_sim/us_clipdata.cpp
M programs/us_audit_trail_gmp/us_audit_trail_gmp.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
M programs/us_autoflow_analysis/us_autoflow_analysis.h
M programs/us_buoyancy/us_buoyancy.cpp
M programs/us_colorgradient/us_colorgradient.cpp
M programs/us_com_project/us_com_project_gui.cpp
M programs/us_com_project/us_com_project_gui.h
M programs/us_combine_models/us_combine_models.cpp
M programs/us_config/us_admin.cpp
M programs/us_config/us_advanced.cpp
M programs/us_config/us_color.cpp
M programs/us_config/us_config.cpp
M programs/us_config/us_database.cpp
M programs/us_config/us_font.cpp
M programs/us_config/us_newxpnhost_db.cpp
M programs/us_config/us_xpnhost.cpp
M programs/us_config/us_xpnhost_db.cpp
M programs/us_ddist_combine/us_ddist_combine.cpp
M programs/us_ddist_combine/us_select_rundd.cpp
M programs/us_density_match/us_density_match.cpp
M programs/us_density_match/us_model_params.cpp
M programs/us_density_match/us_remove_models.cpp
M programs/us_dmga_init/us_constraints_edit.cpp
M programs/us_dmga_init/us_dmga_init.cpp
M programs/us_edit/us_edit.cpp
M programs/us_edit/us_edit.h
M programs/us_edit/us_edit_scan.cpp
M programs/us_edit/us_exclude_profile.cpp
M programs/us_edit/us_get_edit.cpp
M programs/us_edit/us_ri_noise.cpp
M programs/us_edit/us_select_lambdas.cpp
M programs/us_equiltime/us_equiltime.cpp
M programs/us_esigner_gmp/us_esigner_gmp.cpp
M programs/us_esigner_gmp/us_esigner_gmp.h
M programs/us_experiment/us_exp_utils.cpp
M programs/us_experiment/us_experiment_gui_optima.cpp
M programs/us_experiment/us_proto_ranges.cpp
M programs/us_export_legacy/us_export.cpp
M programs/us_fds_filemanager/us_fds_filemanager.cpp
M programs/us_fematch/us_adv_dmgamc.cpp
M programs/us_fematch/us_advanced_fem.cpp
M programs/us_fematch/us_fematch.cpp
M programs/us_fematch/us_plot_control_fem.cpp
M programs/us_fematch/us_resplot_fem.cpp
M programs/us_fematch/us_thread_worker.cpp
M programs/us_fit_meniscus/us_fit_meniscus.cpp
M programs/us_ga_init/us_ga_init.cpp
M programs/us_globalequil/us_eqfit_control.cpp
M programs/us_globalequil/us_eqmodel_control.cpp
M programs/us_globalequil/us_globalequil.cpp
M programs/us_globalequil/us_long_messagebox.cpp
M programs/us_globalequil/us_model_adpars.cpp
M programs/us_globalequil/us_model_select.cpp
M programs/us_grid_editor/us_grid_editor.cpp
M programs/us_helpdaemon/us_helpdaemon.cpp
M programs/us_integral/us_delete_models.cpp
M programs/us_integral/us_integral.cpp
M programs/us_manage_data/us_data_tree.cpp
M programs/us_manage_data/us_manage_data.cpp
M programs/us_modelmetrics/us_modelmetrics.cpp
M programs/us_mwl_species_fit/us_mwl_sf_plot3d.cpp
M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
M programs/us_mwl_species_sim/us_mwl_species_sim.cpp
M programs/us_mwl_spectra/us_mwl_spectra.cpp
M programs/us_mwl_spectra/us_mwls_pltctl.cpp
M programs/us_mwlr_viewer/us_mwl_pltctrl.cpp
M programs/us_mwlr_viewer/us_mwl_run.cpp
M programs/us_mwlr_viewer/us_mwlr_viewer.cpp
M programs/us_pcsa/us_adv_analysis_pc.cpp
M programs/us_pcsa/us_adv_analysis_pc.h
M programs/us_pcsa/us_analysis_control_pc.cpp
M programs/us_pcsa/us_mlplot.cpp
M programs/us_pcsa/us_mrecs_loader.cpp
M programs/us_pcsa/us_pcsa_process.cpp
M programs/us_pcsa/us_plot_control_pc.cpp
M programs/us_pcsa/us_resplot_pc.cpp
M programs/us_pcsa/us_rpscan.cpp
M programs/us_predict2/us_predict2.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.cpp
M programs/us_protocol_dev/us_protocol_dev_gui.h
M programs/us_pseudo3d_combine/us_remove_distros.cpp
M programs/us_pseudo_absorbance/us_add_refScan.cpp
M programs/us_pseudo_absorbance/us_convert_scan.cpp
M programs/us_pseudo_absorbance/us_pseudo_absorbance.cpp
M programs/us_pseudo_absorbance/us_remove_ri.cpp
M programs/us_query_rmsd/us_query_rmsd.cpp
M programs/us_ramp/us_experiment_gui_ra.cpp
M programs/us_ramp/us_get_dbrun_ra.cpp
M programs/us_ramp/us_intensity_ra.cpp
M programs/us_ramp/us_ramp_gui.cpp
M programs/us_ramp/us_select_triples_ra.cpp
M programs/us_reporter/us_reporter.cpp
M programs/us_reporter/us_sync_db.cpp
M programs/us_reporter_gmp/us_reporter_gmp.cpp
M programs/us_reporter_gmp/us_reporter_gmp.h
M programs/us_rotor_calibration/us_get_dbexp.cpp
M programs/us_rotor_calibration/us_rotor_calibration.cpp
M programs/us_second_moment/us_second_moment.cpp
M programs/us_tmst_viewer/us_tmst_viewer.cpp
M programs/us_vhw_combine/us_select_runid.cpp
M programs/us_vhw_combine/us_vhw_combine.cpp
M programs/us_vhw_combine/us_vhwc_pltctl.cpp
M programs/us_vhw_enhanced/us_distrib_plot.cpp
M programs/us_vhw_enhanced/us_vhw_enhanced.cpp
M programs/us_xpn_viewer/us_xpn_run_auc.cpp
M programs/us_xpn_viewer/us_xpn_run_raw.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.cpp
M programs/us_xpn_viewer/us_xpn_viewer_gui.h
M us_somo/add_to_bin/GRPY_linux64
M us_somo/add_to_bin/GRPY_osx10.11
M us_somo/add_to_bin/GRPY_win64.exe
A us_somo/develop/grpy/README.md
A us_somo/develop/grpy/grpy_exposure.hpp
A us_somo/develop/grpy/grpy_process.hpp
A us_somo/develop/grpy/grpy_shell.hpp
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A us_somo/develop/grpy/tests/data/1znf.bead_model
A us_somo/develop/grpy/tests/data/1znf_golden.txt
A us_somo/develop/grpy/tests/data/dumbbell.grpy
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A us_somo/develop/grpy/tests/run.sh
A us_somo/develop/grpy/tests/test_process.cpp
A us_somo/develop/grpy/tests/test_shell.cpp
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M us_somo/develop/include/us_hydrodyn_dad.h
M us_somo/develop/include/us_hydrodyn_dad_fit.h
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A us_somo/develop/include/us_hydrodyn_grid_volume.h
A us_somo/develop/include/us_hydrodyn_hydration.h
M us_somo/develop/include/us_hydrodyn_hydro.h
M us_somo/develop/include/us_hydrodyn_mals_fit.h
M us_somo/develop/include/us_hydrodyn_mals_options.h
M us_somo/develop/include/us_hydrodyn_mals_saxs_fit.h
M us_somo/develop/include/us_hydrodyn_mals_saxs_options.h
M us_somo/develop/include/us_hydrodyn_misc.h
M us_somo/develop/include/us_hydrodyn_pdb_parsing.h
A us_somo/develop/include/us_hydrodyn_perceive.h
A us_somo/develop/include/us_hydrodyn_perceive_dialog.h
A us_somo/develop/include/us_hydrodyn_perceive_elements.h
A us_somo/develop/include/us_hydrodyn_perceive_hybrid.h
A us_somo/develop/include/us_hydrodyn_perceive_saxs.h
A us_somo/develop/include/us_hydrodyn_perceive_somo.h
A us_somo/develop/include/us_hydrodyn_psv.h
A us_somo/develop/include/us_hydrodyn_residue_builder.h
M us_somo/develop/include/us_hydrodyn_save.h
M us_somo/develop/include/us_hydrodyn_saxs.h
M us_somo/develop/include/us_hydrodyn_saxs_hplc.h
A us_somo/develop/include/us_hydrodyn_saxs_iqq_extrap_c0_conc.h
M us_somo/develop/include/us_hydrodyn_saxs_iqq_load_csv.h
M us_somo/develop/include/us_saxs_util.h
M us_somo/develop/include/us_vector.h
M us_somo/develop/libus_somo.pro
A us_somo/develop/perceiver/.gitignore
A us_somo/develop/perceiver/DECISIONS.md
A us_somo/develop/perceiver/GUI_TESTING.md
A us_somo/develop/perceiver/Makefile
A us_somo/develop/perceiver/README.md
A us_somo/develop/perceiver/data/1ADO_noSO4.pdb
A us_somo/develop/perceiver/data/1AO6-compl_monA.pdb
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A us_somo/develop/perceiver/data/2AAS_mod1.pdb
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A us_somo/develop/perceiver/data/psv/1BEB.pdb
A us_somo/develop/perceiver/data/psv/2CGA.pdb
A us_somo/develop/perceiver/data/psv/README.md
A us_somo/develop/perceiver/data/psv/candidates.fasta
A us_somo/develop/perceiver/data/psv_measured.txt
A us_somo/develop/perceiver/data/ref/cctbx_LICENSE.txt
A us_somo/develop/perceiver/data/ref/f0_WaasKirf.dat
A us_somo/develop/perceiver/data/ref/it1992.cpp
A us_somo/develop/perceiver/data/ref/somo.saxs_atoms.generated
A us_somo/develop/perceiver/examples/perceive.somo
A us_somo/develop/perceiver/pdb_lite.h
A us_somo/develop/perceiver/residue_oracle.h
A us_somo/develop/perceiver/run_dialog_test.sh
A us_somo/develop/perceiver/tests/builder.cpp
A us_somo/develop/perceiver/tests/coverage.cpp
A us_somo/develop/perceiver/tests/dialog_qt.cpp
A us_somo/develop/perceiver/tests/emit_residue.cpp
A us_somo/develop/perceiver/tests/grid_volume.cpp
A us_somo/develop/perceiver/tests/hydration.cpp
A us_somo/develop/perceiver/tests/protein_psv.cpp
A us_somo/develop/perceiver/tests/psv.cpp
A us_somo/develop/perceiver/tests/regression.cpp
A us_somo/develop/perceiver/tests/sssr.cpp
A us_somo/develop/perceiver/tests/sssr_real.cpp
A us_somo/develop/perceiver/tests/tests_unit.cpp
A us_somo/develop/perceiver/tinytest.h
A us_somo/develop/perceiver/tools/calibrate_3v_context.py
A us_somo/develop/perceiver/tools/gen_saxs_entries.py
A us_somo/develop/perceiver/tools/hydration_table.py
A us_somo/develop/perceiver/tools/make_noncoded_variant.py
A us_somo/develop/perceiver/tools/psv_durchschlag.py
A us_somo/develop/perceiver/tools/psv_model.py
A us_somo/develop/perceiver/tools/recalc_ligand_volumes.py
R us_somo/develop/src/us_container_grpy.cpp
M us_somo/develop/src/us_hydrodyn.cpp
M us_somo/develop/src/us_hydrodyn_beads.cpp
M us_somo/develop/src/us_hydrodyn_core.cpp
M us_somo/develop/src/us_hydrodyn_dad.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc.cpp
M us_somo/develop/src/us_hydrodyn_dad_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_dad_fit.cpp
M us_somo/develop/src/us_hydrodyn_dad_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_dad_modes.cpp
M us_somo/develop/src/us_hydrodyn_dad_options.cpp
A us_somo/develop/src/us_hydrodyn_dad_script.cpp
M us_somo/develop/src/us_hydrodyn_dad_util.cpp
M us_somo/develop/src/us_hydrodyn_fractal_dimension.cpp
A us_somo/develop/src/us_hydrodyn_grid_volume.cpp
M us_somo/develop/src/us_hydrodyn_grpy.cpp
A us_somo/develop/src/us_hydrodyn_hydration.cpp
M us_somo/develop/src/us_hydrodyn_hydro.cpp
M us_somo/develop/src/us_hydrodyn_load.cpp
M us_somo/develop/src/us_hydrodyn_mals.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_modes.cpp
M us_somo/develop/src/us_hydrodyn_mals_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_fit.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_modes.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_options.cpp
M us_somo/develop/src/us_hydrodyn_mals_saxs_util.cpp
M us_somo/develop/src/us_hydrodyn_mals_util.cpp
M us_somo/develop/src/us_hydrodyn_misc.cpp
M us_somo/develop/src/us_hydrodyn_other.cpp
M us_somo/develop/src/us_hydrodyn_pdb_parsing.cpp
M us_somo/develop/src/us_hydrodyn_pdb_tool.cpp
A us_somo/develop/src/us_hydrodyn_perceive.cpp
A us_somo/develop/src/us_hydrodyn_perceive_dialog.cpp
A us_somo/develop/src/us_hydrodyn_perceive_somo.cpp
A us_somo/develop/src/us_hydrodyn_psv.cpp
A us_somo/develop/src/us_hydrodyn_residue_builder.cpp
M us_somo/develop/src/us_hydrodyn_save.cpp
M us_somo/develop/src/us_hydrodyn_saxs.cpp
M us_somo/develop/src/us_hydrodyn_saxs_1d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_2d.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_buffer_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_bl.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_ciq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_conc_load.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_gui.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_makeiq.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_modes.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_options.cpp
M us_somo/develop/src/us_hydrodyn_saxs_hplc_util.cpp
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M us_somo/develop/src/us_hydrodyn_saxs_iqq_load_csv.cpp
M us_somo/develop/src/us_hydrodyn_saxs_loads.cpp
M us_somo/develop/src/us_hydrodyn_script.cpp
M us_somo/develop/src/us_hydrodyn_settings.cpp
M us_somo/develop/src/us_hydrodyn_write.cpp
M us_somo/develop/src/us_saxs_util_best.cpp
M us_somo/develop/src/us_saxs_util_dmd.cpp
M us_somo/develop/src/us_saxs_util_hydro.cpp
M us_somo/develop/src/us_saxs_util_loads.cpp
M us_somo/develop/src/us_saxs_util_static.cpp
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Log Message:
-----------
Merge branch 'main' into issue-1007-gimp3-logo
Commit: 9e741c31ad26325fec3bfad5bf0fd53edc3bb903
https://github.com/ehb54/ultrascan3/commit/9e741c31ad26325fec3bfad5bf0fd53edc3bb903
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-09-02 (Wed, 02 Sep 2026)
Changed paths:
M admin/cmake/packaging/macos/MacDeploy.cmake
M admin/cmake/packaging/macos/MacHpcDeploy.cmake
M doc/manual/source/start_page-new.rst
M pkg/macos/README.md
M pkg/macos/preinstall
M programs/CMakeLists.txt
Log Message:
-----------
Merge branch 'main' into issue-1007-gimp3-logo
Commit: 0aa2dd63f399b67f62333bd302f669757f272e36
https://github.com/ehb54/ultrascan3/commit/0aa2dd63f399b67f62333bd302f669757f272e36
Author: aaron-auc <95181880+aaron-auc at users.noreply.github.com>
Date: 2026-09-02 (Wed, 02 Sep 2026)
Changed paths:
A doc/develop/gimp/README.md
A doc/develop/gimp/ultrascan_gimpv3.scm
Log Message:
-----------
Merge pull request #514 from ehb54/issue-1007-gimp3-logo
Add GIMP 3 UltraScan logo generator
Compare: https://github.com/ehb54/ultrascan3/compare/6ccb5e00af0f...0aa2dd63f399
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