[us-commits] [ehb54/ultrascan3] 990e58: GMP-ABDE: 5. ANALYSIS -- add backward compatibilit...

Thu Sep 17 13:17:32 MDT 2026

  Branch: refs/heads/alexey-dev-issue983
  Home:   https://github.com/ehb54/ultrascan3
  Commit: 990e5835123d7e7e870a2f3ba71ab89b9a15be73
      https://github.com/ehb54/ultrascan3/commit/990e5835123d7e7e870a2f3ba71ab89b9a15be73
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-02 (Wed, 02 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  GMP-ABDE: 5. ANALYSIS -- add backward compatibility for processing integrations with DB records whose JSON does not have sample tier...

  Commit: 901db3d6bfdc71ff147a0c723bed2b59ada755be
      https://github.com/ehb54/ultrascan3/commit/901db3d6bfdc71ff147a0c723bed2b59ada755be
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-02 (Wed, 02 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  [and plot ranges correctly]GMP-ABDE: 5. ANALYSIS -- add backward compatibility for processing integrations with DB records whose JSON does not have sample tier...

  Commit: 293a0f5b25defdcdec19735facce41e55b2d0145
      https://github.com/ehb54/ultrascan3/commit/293a0f5b25defdcdec19735facce41e55b2d0145
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-02 (Wed, 02 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  [use original analytes names in rpeort int. section && plot labels]GMP-ABDE: 5. ANALYSIS -- add backward compatibility for processing integrations with DB records whose JSON does not have sample tier...

  Commit: aa575c815c808baf5368d6f7e17e5d83939ef082
      https://github.com/ehb54/ultrascan3/commit/aa575c815c808baf5368d6f7e17e5d83939ef082
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-02 (Wed, 02 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  [[1]use original analytes names in rpeort int. section && plot labels]GMP-ABDE: 5. ANALYSIS -- add backward compatibility for processing integrations with DB records whose JSON does not have sample tier...

  Commit: 79c6e36317affce3fad61a34b6a832220bbaf152
      https://github.com/ehb54/ultrascan3/commit/79c6e36317affce3fad61a34b6a832220bbaf152
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-08 (Tue, 08 Sep 2026)

  Changed paths:
    M gui/us_report_gui.cpp
    M gui/us_report_gui.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h
    M utils/us_report_gmp.cpp
    M utils/us_report_gmp.h

  Log Message:
  -----------
  GMP-ABDE: 5. ANALYSIS && REPORT -- refactoring on using full analystes names labels in plots when running from withing ABDE-GMP & stand-alone Report programs...

  Commit: 1bb470346f619e2e9e1da4cc0639f96991c3b9e7
      https://github.com/ehb54/ultrascan3/commit/1bb470346f619e2e9e1da4cc0639f96991c3b9e7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-08 (Tue, 08 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP-ABDE: 5. ANALYSIS && REPORT -- test for using Qgroupbox dialog for selecting signals for different analytes (per-channel) whose integration results to be reported...

  Commit: 693c555a97ea5d3072e4a399d27e81dd2384a0e9
      https://github.com/ehb54/ultrascan3/commit/693c555a97ea5d3072e4a399d27e81dd2384a0e9
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-08 (Tue, 08 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  [Fix for the the old deprecated 3-int-button overload in QMessageBox]GMP-ABDE: 5. ANALYSIS && REPORT -- test for using Qgroupbox dialog for selecting signals for different analytes (per-channel) whose integration results to be reported...

  Commit: d3ea8b42cb9de5b5dd6686e67eb4ffdf10626c9c
      https://github.com/ehb54/ultrascan3/commit/d3ea8b42cb9de5b5dd6686e67eb4ffdf10626c9c
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-09 (Wed, 09 Sep 2026)

  Changed paths:
    A .github/actions/build-package/action.yml
    A .github/workflows/app-build.yml
    R .github/workflows/build-macos-arm.yml
    R .github/workflows/build-macos-intel.yml
    R .github/workflows/build-oraclelinux.yml
    R .github/workflows/build-ubuntu.yml
    R .github/workflows/build-windows.yml
    M .github/workflows/bump-version.yml
    M .github/workflows/nightly-build.yml
    M .github/workflows/on-demand-build.yml
    M .github/workflows/release.yml
    M .github/workflows/static-analysis.yml
    A .github/workflows/toolchain-build.yml
    A .github/workflows/unit-tests-qt5-v2.yml
    A .github/workflows/unit-tests-qt6-v2.yml
    R .github/workflows/unit-tests-v2.yml
    M .gitignore
    M CMakeLists.txt
    M CMakePresets.json
    M admin/cmake/README.md
    M admin/cmake/packaging/linux/LinuxDeploy.cmake
    M admin/cmake/packaging/linux/LinuxHpcDeploy.cmake
    M admin/cmake/packaging/macos/MacDeploy.cmake
    M admin/cmake/packaging/macos/MacHpcDeploy.cmake
    M admin/cmake/packaging/windows/WinDeploy.cmake
    M admin/cmake/toolchain.cmake
    M admin/cmake/triplets/arm64-windows.cmake
    A admin/cmake/triplets/x64-windows.cmake
    M admin/test/docker/Dockerfile
    A buildsys/docker/oraclelinux8.Dockerfile
    A buildsys/docker/ubuntu2404.Dockerfile
    A buildsys/toolchain.lock.json
    R buildsys/vcpkg/overlay-ports/qtbase/GLIB2-static.patch
    R buildsys/vcpkg/overlay-ports/qtbase/allow_outside_prefix.patch
    R buildsys/vcpkg/overlay-ports/qtbase/clang-cl_QGADGET_fix.diff
    R buildsys/vcpkg/overlay-ports/qtbase/clang-cl_source_location.patch
    R buildsys/vcpkg/overlay-ports/qtbase/cmake/qt_install_copyright.cmake
    R buildsys/vcpkg/overlay-ports/qtbase/cmake/qt_install_submodule.cmake
    R buildsys/vcpkg/overlay-ports/qtbase/cmake/qt_port_details.cmake
    R buildsys/vcpkg/overlay-ports/qtbase/config_install.patch
    R buildsys/vcpkg/overlay-ports/qtbase/dont_force_cmakecache_latest.patch
    R buildsys/vcpkg/overlay-ports/qtbase/env.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix-host-aliasing.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix-libresolv-test.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix-link-lib-discovery.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix-missing-include.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix_cmake_build.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix_deploy_windows.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix_egl.patch
    R buildsys/vcpkg/overlay-ports/qtbase/fix_egl_2.patch
    R buildsys/vcpkg/overlay-ports/qtbase/framework.patch
    R buildsys/vcpkg/overlay-ports/qtbase/harfbuzz.patch
    R buildsys/vcpkg/overlay-ports/qtbase/installed_dir.patch
    R buildsys/vcpkg/overlay-ports/qtbase/macdeployqt-symlinks.patch
    R buildsys/vcpkg/overlay-ports/qtbase/moltenvk.patch
    R buildsys/vcpkg/overlay-ports/qtbase/port.data.cmake
    R buildsys/vcpkg/overlay-ports/qtbase/portfile.cmake
    R buildsys/vcpkg/overlay-ports/qtbase/qmake.debug.bat
    R buildsys/vcpkg/overlay-ports/qtbase/qt.conf.in
    R buildsys/vcpkg/overlay-ports/qtbase/qtpaths.debug.bat
    R buildsys/vcpkg/overlay-ports/qtbase/use-shared-mime-info.patch
    R buildsys/vcpkg/overlay-ports/qtbase/use_inotify_on_freebsd.patch
    R buildsys/vcpkg/overlay-ports/qtbase/vcpkg.json
    R buildsys/vcpkg/overlay-ports/qtbase/windeployqt.debug.bat
    R buildsys/vcpkg/overlay-ports/qtbase/xcodebuild-not-installed.patch
    A doc/develop/gimp/README.md
    A doc/develop/gimp/ultrascan_gimpv3.scm
    M doc/manual/source/conf.py
    M doc/manual/source/start_page-new.rst
    M etc/etc_belongs_list.txt
    M gui/us_gui_settings.cpp
    M gui/us_theme.cpp
    M pkg/macos/README.md
    M pkg/macos/preinstall
    M programs/CMakeLists.txt
    M scripts/bootstrap-linux.sh
    M scripts/bootstrap-macos.sh
    A scripts/build-toolchain.ps1
    A scripts/build-toolchain.sh
    M scripts/build.ps1
    M scripts/build.sh
    A scripts/fetch-toolchain.ps1
    A scripts/fetch-toolchain.sh
    A scripts/prepare-windows-ci.ps1
    R scripts/warm-cache.sh
    M test-docker.sh
    M test/CMakeLists.txt
    M test/README
    A test/common/us3_gui_test_main.h
    A test/gui/CMakeLists.txt
    A test/gui/test_us_editor_gui.cpp
    A test/gui/test_us_gui_test_isolation.cpp
    M test/utils/CMakeLists.txt
    A test/utils/test_us_build_variant.cpp
    M test/utils/test_us_memory.cpp
    M test/utils/test_us_model.cpp
    A test/utils/test_us_test_environment.cpp
    M test/utils/test_us_utils_main.cpp
    M utils/us_memory.cpp
    M utils/us_settings.cpp
    M utils/us_settings.h
    M vcpkg.json

  Log Message:
  -----------
  Merge branch 'main' into alexey-dev-issue1027

  Commit: e77a8e08abb9c95b75b06fbbbca755a8e96dbd70
      https://github.com/ehb54/ultrascan3/commit/e77a8e08abb9c95b75b06fbbbca755a8e96dbd70
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: 0ece7d122a0bf79542d72588451802c67c759f3f
      https://github.com/ehb54/ultrascan3/commit/0ece7d122a0bf79542d72588451802c67c759f3f
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [1]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: e19d3ad4788cb49eda629315b7a4d174f525dc90
      https://github.com/ehb54/ultrascan3/commit/e19d3ad4788cb49eda629315b7a4d174f525dc90
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [2]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: 43ed4ca9aee2a5c11780125be0f16f126c719f82
      https://github.com/ehb54/ultrascan3/commit/43ed4ca9aee2a5c11780125be0f16f126c719f82
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h

  Log Message:
  -----------
  [3]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: 53f965478f5612cd101ddf02b0a267ee5f60eeae
      https://github.com/ehb54/ultrascan3/commit/53f965478f5612cd101ddf02b0a267ee5f60eeae
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [3a]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: 3c7455858566e6d7767c50ca822cd435c76bb5df
      https://github.com/ehb54/ultrascan3/commit/3c7455858566e6d7767c50ca822cd435c76bb5df
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h

  Log Message:
  -----------
  [4]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...

  Commit: cc9b9fbec5f67af39781579147bf528d19d12fce
      https://github.com/ehb54/ultrascan3/commit/cc9b9fbec5f67af39781579147bf528d19d12fce
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [4a]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...ush

  Commit: c4fd147ae564f10f4f9363aa2926b0b5b763db87
      https://github.com/ehb54/ultrascan3/commit/c4fd147ae564f10f4f9363aa2926b0b5b763db87
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [5a]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...ushush

  Commit: c3326ba03268f26c6aad6b94033e68bcf35de02e
      https://github.com/ehb54/ultrascan3/commit/c3326ba03268f26c6aad6b94033e68bcf35de02e
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-10 (Thu, 10 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp

  Log Message:
  -----------
  [5b]GMP: 1. EXP.: 8. APorfile->ABDE -- fix geomentry...ushush

  Commit: b42223145a9c38822bcf6ab68c5e4e13bd1e2c00
      https://github.com/ehb54/ultrascan3/commit/b42223145a9c38822bcf6ab68c5e4e13bd1e2c00
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-11 (Fri, 11 Sep 2026)

  Changed paths:
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  GMP: 6. REPORT | stand-alone Reporter -- fix pagiantion errors in User Interactions seciton...

  Commit: 1a328fca69431054278213b71b4348034457dbd2
      https://github.com/ehb54/ultrascan3/commit/1a328fca69431054278213b71b4348034457dbd2
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-11 (Fri, 11 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h

  Log Message:
  -----------
  Merge pull request #556 from ehb54/alexey-dev-issue1059

Fixed AProfile GUI for ABDE-GMP

  Commit: 7fee4e121dc8a20017b531b1aeddc15a1efd1325
      https://github.com/ehb54/ultrascan3/commit/7fee4e121dc8a20017b531b1aeddc15a1efd1325
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-11 (Fri, 11 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h

  Log Message:
  -----------
  Merge branch 'main' into alexey-dev-issue1027

  Commit: 0dacca20a3a41ce52414b0adece6607341d210d2
      https://github.com/ehb54/ultrascan3/commit/0dacca20a3a41ce52414b0adece6607341d210d2
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-11 (Fri, 11 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  Q_FOREACH changed to for loop while going over JSON...

  Commit: 8d45c38201ca798b9707b2a6d860529e61d7f723
      https://github.com/ehb54/ultrascan3/commit/8d45c38201ca798b9707b2a6d860529e61d7f723
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-11 (Fri, 11 Sep 2026)

  Changed paths:
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h

  Log Message:
  -----------
  Merge branch 'alexey-dev-issue1027' of github.com:ehb54/ultrascan3 into alexey-dev-issue1027

  Commit: f1c3182e7b33b370e847327a480c92c905ded4d7
      https://github.com/ehb54/ultrascan3/commit/f1c3182e7b33b370e847327a480c92c905ded4d7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-13 (Sun, 13 Sep 2026)

  Changed paths:
    M gui/us_report_gui.cpp
    M gui/us_report_gui.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h
    M utils/us_report_gmp.cpp
    M utils/us_report_gmp.h

  Log Message:
  -----------
  Merge pull request #534 from ehb54/alexey-dev-issue1027

GMP-ABDE: add integration info for both DNA and protein signals in the report

  Commit: 044424575cfe034dc857c2de1b564d28d85470e7
      https://github.com/ehb54/ultrascan3/commit/044424575cfe034dc857c2de1b564d28d85470e7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-13 (Sun, 13 Sep 2026)

  Changed paths:
    M gui/us_report_gui.cpp
    M gui/us_report_gui.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_mwl_species_fit/us_mwl_species_fit.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h
    M utils/us_report_gmp.cpp
    M utils/us_report_gmp.h

  Log Message:
  -----------
  Merge branch 'main' into alexey-dev-issue1060

  Commit: af46c846e6727147d7f4f6bf3141d55cd95a736d
      https://github.com/ehb54/ultrascan3/commit/af46c846e6727147d7f4f6bf3141d55cd95a736d
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-13 (Sun, 13 Sep 2026)

  Changed paths:
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h

  Log Message:
  -----------
  Merge pull request #558 from ehb54/alexey-dev-issue1060

GMP: 6. REPORT | stand-alone Reporter -- fix pagiantion errors in User Interaction Section

  Commit: bf1f4fc5a092002be85ff2a6220b1b861eb6b186
      https://github.com/ehb54/ultrascan3/commit/bf1f4fc5a092002be85ff2a6220b1b861eb6b186
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-14 (Mon, 14 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h

  Log Message:
  -----------
  ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: ae2c84406401107f90527128a16c586b023ec28c
      https://github.com/ehb54/ultrascan3/commit/ae2c84406401107f90527128a16c586b023ec28c
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-14 (Mon, 14 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [1]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: f97c13d7b20760f631de30792a89ff448bce7a2e
      https://github.com/ehb54/ultrascan3/commit/f97c13d7b20760f631de30792a89ff448bce7a2e
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-14 (Mon, 14 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [2]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 1179ec5ce7160c3bb242aaa6d1ce48aef334eef2
      https://github.com/ehb54/ultrascan3/commit/1179ec5ce7160c3bb242aaa6d1ce48aef334eef2
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-14 (Mon, 14 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h

  Log Message:
  -----------
  [3]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 546c19539248d98b2885bc53db4693ba8ee168f7
      https://github.com/ehb54/ultrascan3/commit/546c19539248d98b2885bc53db4693ba8ee168f7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-14 (Mon, 14 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [3a]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 9e4a7db550dceebe68c1ebe10dfae358409c6eb7
      https://github.com/ehb54/ultrascan3/commit/9e4a7db550dceebe68c1ebe10dfae358409c6eb7
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [4]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 15bb134228b0367b89ed700238299e657d95b58e
      https://github.com/ehb54/ultrascan3/commit/15bb134228b0367b89ed700238299e657d95b58e
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [4a]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 9e924b7d8ff83b96cfbf21855eeff34da8f4b5af
      https://github.com/ehb54/ultrascan3/commit/9e924b7d8ff83b96cfbf21855eeff34da8f4b5af
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h

  Log Message:
  -----------
  [5]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: b92db1535e09fbd5e336a9a1a13751fe62153302
      https://github.com/ehb54/ultrascan3/commit/b92db1535e09fbd5e336a9a1a13751fe62153302
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M gui/us_plot.cpp
    M gui/us_plot.h
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [6 && plot's title width]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: 2dce147733b801a0e8a6f92b5cfd06da47082502
      https://github.com/ehb54/ultrascan3/commit/2dce147733b801a0e8a6f92b5cfd06da47082502
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M gui/us_plot.cpp
    M gui/us_plot.h
    M programs/us_edit/us_edit.cpp

  Log Message:
  -----------
  [7 && plot's title width]ABDE-GMP: 4. EDIT-> Manual Edit | Baseline Correction -- fix geomentries...

  Commit: c8a7fecdd8f4f8eb2f9a3af9ddc0676a1ca7794e
      https://github.com/ehb54/ultrascan3/commit/c8a7fecdd8f4f8eb2f9a3af9ddc0676a1ca7794e
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  ABDE-GMP: 5. ANALYSIS | Normalization -- change color of the mouse cross-section to black to not blend with the light background...

  Commit: d2bc91a4c792b5edc40dc5021affd4569284785c
      https://github.com/ehb54/ultrascan3/commit/d2bc91a4c792b5edc40dc5021affd4569284785c
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M programs/us_abde/us_norm_profile.cpp

  Log Message:
  -----------
  [and the colors of both picks]ABDE-GMP: 5. ANALYSIS | Normalization -- change color of the mouse cross-section to black to not blend with the light background...

  Commit: 716585b3f3bbb97803d4389089dd8d158502a7f9
      https://github.com/ehb54/ultrascan3/commit/716585b3f3bbb97803d4389089dd8d158502a7f9
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-15 (Tue, 15 Sep 2026)

  Changed paths:
    M gui/us_plot.cpp
    M gui/us_plot.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h

  Log Message:
  -----------
  Merge pull request #561 from ehb54/alexey-dev-issue1061

Fixed geometries for different US_Edit constructors (ABDE-GMP: Manual Edit, Baseline Correction GUIs)

  Commit: 53fbbed5a672dcb8d47245338c785356739ff324
      https://github.com/ehb54/ultrascan3/commit/53fbbed5a672dcb8d47245338c785356739ff324
  Author: alexsav815 <alexsav.science at gmail.com>
  Date:   2026-09-17 (Thu, 17 Sep 2026)

  Changed paths:
    M gui/us_plot.cpp
    M gui/us_plot.h
    M gui/us_report_gui.cpp
    M gui/us_report_gui.h
    M programs/us_abde/us_norm_profile.cpp
    M programs/us_abde/us_norm_profile.h
    M programs/us_analysis_profile/us_analysis_profile.cpp
    M programs/us_analysis_profile/us_analysis_profile.h
    M programs/us_autoflow_analysis/us_autoflow_analysis.cpp
    M programs/us_edit/us_edit.cpp
    M programs/us_edit/us_edit.h
    M programs/us_reporter_gmp/us_reporter_gmp.cpp
    M programs/us_reporter_gmp/us_reporter_gmp.h
    M utils/us_report_gmp.cpp
    M utils/us_report_gmp.h

  Log Message:
  -----------
  Merge remote-tracking branch 'origin/main' into alexey-dev-issue983

Compare: https://github.com/ehb54/ultrascan3/compare/7e07c8d1a304...53fbbed5a672

To unsubscribe from these emails, change your notification settings at https://github.com/ehb54/ultrascan3/settings/notifications